MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP046728 Location: 3799710..3804652 Organism: Mycobacterium tuberculosis strain TCDC11 Replicon: chromosome
Accession: NZ_CP046728 Location: 3799710..3804652 Organism: Mycobacterium tuberculosis strain TCDC11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GP477_RS17740 () | 3795545..3796435 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| GP477_RS17745 () | 3796444..3798282 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| GP477_RS17750 () | 3798279..3799268 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| GP477_RS17755 () | 3799268..3799657 | - | 390 | Protein_3507 | polyprenyl synthetase family protein | - |
| GP477_RS17760 () | 3799710..3800971 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| GP477_RS17765 () | 3801013..3801678 | - | 666 | Protein_3509 | polyprenyl synthetase family protein | - |
| GP477_RS17770 () | 3802432..3802824 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GP477_RS17775 () | 3802824..3803132 | - | 309 | WP_003417918.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GP477_RS17780 () | 3803311..3804652 | + | 1342 | Protein_3512 | ISNCY family transposase ISRjo3 | Transposase |
| GP477_RS17785 () | 3804842..3807019 | + | 2178 | WP_016330440.1 | PE family protein | - |
| GP477_RS17790 () | 3807090..3807962 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| GP477_RS17795 () | 3808036..3808746 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |