MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33309 bp
Accession: NZ_CP046719 Location: 1..33309 Organism: Escherichia coli strain T16R Replicon: plasmid pT16R-3
Accession: NZ_CP046719 Location: 1..33309 Organism: Escherichia coli strain T16R Replicon: plasmid pT16R-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPL39_RS24320 () | 277..3024 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| GPL39_RS24325 () | 3043..3315 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| GPL39_RS24330 () | 3383..4003 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| GPL39_RS24335 () | 4359..4574 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| GPL39_RS24340 () | 4571..4864 | - | 294 | WP_060598542.1 | LuxR family transcriptional regulator | - |
| GPL39_RS24345 () | 4941..6170 | - | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| GPL39_RS24350 () | 6174..6677 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| GPL39_RS24355 () | 7038..7385 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GPL39_RS24360 () | 7382..7630 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GPL39_RS24365 () | 7935..8285 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| GPL39_RS24370 () | 8376..8675 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| GPL39_RS24375 () | 9129..9356 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| GPL39_RS24380 () | 9343..9594 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| GPL39_RS24385 () | 9591..10133 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| GPL39_RS24390 () | 10238..10753 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| GPL39_RS24400 () | 12168..13034 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| GPL39_RS24405 () | 13047..13451 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| GPL39_RS24410 () | 13586..14113 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| GPL39_RS24415 () | 14504..15226 | - | 723 | WP_039003037.1 | PAP2 family protein | - |
| GPL39_RS24420 () | 15298..16923 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| GPL39_RS24425 () | 17103..17726 | - | 624 | Protein_21 | DUF2806 domain-containing protein | - |
| GPL39_RS24430 () | 17887..18156 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| GPL39_RS24435 () | 18231..18878 | - | 648 | WP_000587671.1 | P-loop NTPase | - |
| GPL39_RS24440 () | 20419..21123 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GPL39_RS24445 () | 21210..21674 | - | 465 | WP_001293134.1 | H-NS histone family protein | - |
| GPL39_RS24450 () | 21692..21898 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| GPL39_RS24455 () | 21895..24048 | - | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| GPL39_RS24460 () | 24053..24625 | - | 573 | WP_001198960.1 | hypothetical protein | - |
| GPL39_RS24465 () | 24629..24775 | - | 147 | WP_000382583.1 | hypothetical protein | - |
| GPL39_RS24470 () | 24936..25241 | - | 306 | WP_001350475.1 | putative conjugal transfer protein | - |
| GPL39_RS24475 () | 25225..25644 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| GPL39_RS24480 () | 25656..27518 | - | 1863 | WP_170324155.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GPL39_RS24485 () | 27505..28533 | - | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| GPL39_RS24490 () | 28535..29653 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| GPL39_RS24495 () | 29646..30554 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| GPL39_RS24500 () | 30551..31237 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| GPL39_RS24505 () | 31752..32846 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|