NZ_CP0467181..172892

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 172892 bp
Accession: NZ_CP046718        Location: 1..172892         Organism: Escherichia coli strain T16R       Replicon: plasmid pT16R-2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GPL39_RS23335 () 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
GPL39_RS23340 () 1263..2003 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
GPL39_RS23345 () 2124..2312 - 189 WP_014640565.1 hypothetical protein -
GPL39_RS23350 () 2686..3588 - 903 WP_001312822.1 hypothetical protein VF
GPL39_RS23355 () 3657..4766 - 1110 WP_000771475.1 SDR family oxidoreductase -
GPL39_RS23360 () 5199..6152 - 954 WP_000280980.1 Protease 7 VF
GPL39_RS23365 () 6256..6645 + 390 WP_001332050.1 IS110 family transposase ISEc20 Transposase
GPL39_RS23370 () 7425..7583 - 159 WP_001312823.1 integrase core domain-containing protein -
GPL39_RS23375 () 7767..8069 + 303 Protein_8 IS3 family transposase IS1203 Transposase
GPL39_RS23380 () 8125..8367 + 243 Protein_9 IS1 family transposase IS1A Transposase
GPL39_RS23385 () 8450..8875 + 426 WP_000422741.1 IS66 family transposase ISEc23 Transposase
GPL39_RS23390 () 8872..9222 + 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
GPL39_RS23395 () 9253..10866 + 1614 WP_000080195.1 IS66 family transposase ISEc23 Transposase
GPL39_RS23400 () 10913..11362 + 450 Protein_13 IS1-like element IS1B family transposase -
GPL39_RS23405 () 11356..11637 - 282 WP_072834405.1 hypothetical protein -
GPL39_RS23410 () 11778..13604 - 1827 WP_001339650.1 AAA family ATPase -
GPL39_RS23415 () 13607..14092 - 486 WP_001015823.1 hypothetical protein -
GPL39_RS23420 () 14082..15182 - 1101 WP_072714138.1 hypothetical protein -
GPL39_RS23425 () 15368..16336 + 969 WP_165887186.1 IS5 family transposase IS903B Transposase
GPL39_RS23430 () 16777..16926 - 150 Protein_19 IS3 family transposase IS2 Transposase
GPL39_RS23435 () 17104..18297 - 1194 WP_000450494.1 GTP-binding protein -
GPL39_RS23440 () 19520..20756 - 1237 Protein_21 IS3 family transposase IS2 Transposase
GPL39_RS23445 () 21383..21676 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
GPL39_RS23450 () 21734..21933 - 200 Protein_23 lysis protein -
GPL39_RS23455 () 22487..23586 + 1100 Protein_24 IS481 family transposase ISKpn28 Transposase
GPL39_RS23460 () 24822..25937 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
GPL39_RS23465 () 26077..29736 + 3660 WP_165887187.1 Multidrug efflux ATP-binding/permease protein VF
GPL39_RS23470 () 29840..31069 + 1230 WP_001552738.1 Enterochelin esterase VF
GPL39_RS23475 () 31154..32110 + 957 WP_000271276.1 Ferri-bacillibactin esterase BesA VF
GPL39_RS23480 () 32155..34332 - 2178 WP_072657522.1 Ferric enterobactin receptor VF
GPL39_RS23485 () 35187..35336 - 150 Protein_30 3-deoxy-7-phosphoheptulonate synthase -
GPL39_RS23490 () 35348..36045 - 698 Protein_31 IS1 family transposase -
GPL39_RS23495 () 36097..36171 - 75 Protein_32 colicin -
GPL39_RS23500 () 36149..36385 - 237 WP_014640552.1 colicin V immunity protein -
GPL39_RS23505 () 36849..37130 - 282 WP_001105066.1 hypothetical protein -
GPL39_RS23510 () 37303..37470 + 168 Protein_35 colicin-B -
GPL39_RS23515 () 37488..38015 - 528 WP_000203272.1 colicin B immunity protein -
GPL39_RS23520 () 38259..39074 + 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
GPL39_RS23525 () 39124..39477 - 354 WP_000864812.1 colicin M immunity protein -
GPL39_RS23530 () 39655..40446 - 792 WP_000016493.1 site-specific integrase -
GPL39_RS23535 () 40443..41132 - 690 WP_000796228.1 hypothetical protein -
GPL39_RS23540 () 41176..41526 - 351 WP_000493379.1 hypothetical protein -
GPL39_RS23545 () 42097..42357 + 261 WP_000343102.1 hypothetical protein -
GPL39_RS23550 () 42354..42944 + 591 WP_000194555.1 hypothetical protein -
GPL39_RS23555 () 42962..43309 - 348 WP_000142424.1 hypothetical protein -
GPL39_RS23560 () 43428..43775 + 348 WP_000762580.1 hypothetical protein -
GPL39_RS23565 () 43793..45673 - 1881 WP_001283356.1 colicin -
GPL39_RS23570 () 45952..47298 - 1347 WP_001132019.1 hypothetical protein -
GPL39_RS23575 () 47652..48254 + 603 WP_000517689.1 hypothetical protein -
GPL39_RS23580 () 48310..48804 + 495 WP_001442119.1 hypothetical protein -
GPL39_RS23585 () 48804..49070 + 267 WP_000627831.1 hypothetical protein -
GPL39_RS23590 () 49547..49963 - 417 WP_031610367.1 hypothetical protein -
GPL39_RS23595 () 49972..52938 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
GPL39_RS23600 () 52941..53390 - 450 WP_050491481.1 Tn3 family transposase TnpR_TnAs3 Transposase
GPL39_RS23605 () 53415..54119 + 705 WP_073520228.1 IS6 family transposase IS15DI Transposase
GPL39_RS23610 () 54168..54329 - 162 Protein_55 Tn3 family transposase TnpR_TnAs3 Transposase
GPL39_RS23615 () 54455..54805 - 351 WP_000454193.1 DUF3330 domain-containing protein -
GPL39_RS23620 () 55008..56021 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
GPL39_RS23625 () 56179..56652 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
GPL39_RS23630 () 56783..57571 + 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
GPL39_RS23635 () 57777..58124 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
GPL39_RS23640 () 58118..58957 + 840 WP_000259031.1 Dihydropteroate synthase ARG
GPL39_RS23645 () 59085..59288 + 204 WP_000376616.1 hypothetical protein -
GPL39_RS23650 () 59444..60649 + 1206 WP_000184001.1 chromate efflux transporter -
GPL39_RS23655 () 60660..60965 + 306 WP_000130000.1 hypothetical protein Relaxase
GPL39_RS23660 () 61009..61074 + 66 Protein_65 EAL domain-containing protein -
GPL39_RS23665 () 61192..61956 + 765 WP_165887188.1 IS6 family transposase IS6100 Transposase
GPL39_RS23670 () 62449..63033 - 585 WP_001137892.1 TetR family transcriptional regulator -
GPL39_RS23675 () 63033..64271 - 1239 WP_000004159.1 MFS transporter -
GPL39_RS23680 () 64268..65173 - 906 WP_000219391.1 hypothetical protein ARG
GPL39_RS23685 () 65295..65999 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GPL39_RS23690 () 66150..66965 + 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
GPL39_RS23695 () 67155..67859 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GPL39_RS23700 () 67924..69174 - 1251 Protein_73 transposase -
GPL39_RS23705 () 69249..69917 - 669 WP_001300294.1 putative signaling protein VF
GPL39_RS23710 () 69953..70189 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
GPL39_RS23715 () 70186..70548 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
GPL39_RS23720 () 70566..72260 - 1695 WP_000105636.1 mercury(II) reductase -
GPL39_RS23725 () 72312..72734 - 423 WP_001340589.1 organomercurial transporter MerC -
GPL39_RS23730 () 72770..73045 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
GPL39_RS23735 () 73059..73409 - 351 WP_001294663.1 mercuric transport protein MerT -
GPL39_RS23740 () 73481..73915 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
GPL39_RS23745 () 74015..74875 + 861 WP_000027057.1 Beta-lactamase TEM ARG
GPL39_RS23750 () 75024..75869 + 846 Protein_83 TCR/Tet family MFS transporter -
GPL39_RS23755 () 75836..76024 - 189 Protein_84 IS91 family transposase -
GPL39_RS23760 () 76136..76441 - 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
GPL39_RS23765 () 76469..77683 - 1215 WP_000214121.1 Bicyclomycin resistance protein ARG
GPL39_RS24610 () 77900..78346 - 447 Protein_87 DUF3363 domain-containing protein -
GPL39_RS23775 () 78815..80308 - 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
GPL39_RS23780 () 80519..80743 - 225 WP_000743213.1 hypothetical protein -
GPL39_RS23785 () 80740..81477 - 738 WP_001446887.1 Tn3 family transposase TnpR_TnEc1 Transposase
GPL39_RS23790 () 81963..82103 - 141 WP_001044210.1 hypothetical protein -
GPL39_RS23795 () 82109..82813 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
GPL39_RS23800 () 82874..83050 + 177 Protein_93 replication protein C -
GPL39_RS23810 () 83358..84173 + 816 WP_001043260.1 Dihydropteroate synthase ARG
GPL39_RS23815 () 84234..85037 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
GPL39_RS23820 () 85037..85873 + 837 WP_000480972.1 hypothetical protein ARG
GPL39_RS23825 () 85927..86163 + 237 WP_042005022.1 hypothetical protein -
GPL39_RS23830 () 86195..86821 - 627 WP_031606906.1 tetracycline resistance transcriptional repressor TetR(A) -
GPL39_RS23835 () 86927..88126 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
GPL39_RS23840 () 88158..89018 - 861 WP_000493383.1 EamA family transporter -
GPL39_RS23845 () 89027..89266 - 240 Protein_101 transposase -
GPL39_RS23850 () 89322..89678 - 357 Protein_102 IS6 family transposase IS15DI Transposase
GPL39_RS23855 () 89732..90436 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
GPL39_RS23860 () 90739..91599 + 861 WP_000027057.1 Beta-lactamase TEM ARG
GPL39_RS23865 () 91749..91847 - 99 Protein_105 IS1 family transposase -
GPL39_RS23870 () 91876..93186 - 1311 WP_001262765.1 DUF262 domain-containing protein -
GPL39_RS23875 () 93471..93872 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
GPL39_RS23880 () 93805..94062 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
GPL39_RS23885 () 94155..94808 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
GPL39_RS23895 () 95747..96604 - 858 WP_065800511.1 incFII family plasmid replication initiator RepA -
GPL39_RS23900 () 96597..96671 - 75 WP_001365705.1 RepA leader peptide Tap -
GPL39_RS23905 () 96906..97166 - 261 WP_000078108.1 replication regulatory protein RepA -
GPL39_RS23910 () 98108..100963 - 2856 WP_053320759.1 chromosome segregation protein SMC -
GPL39_RS23915 () 101028..103061 - 2034 WP_000887497.1 N-6 DNA methylase -
GPL39_RS23920 () 103107..105656 - 2550 WP_053320758.1 DEAD/DEAH box helicase family protein -
GPL39_RS23925 () 105942..106154 - 213 WP_001299730.1 ANR family transcriptional regulator -
GPL39_RS23930 () 106290..106850 - 561 WP_024184455.1 fertility inhibition protein FinO -
GPL39_RS23935 () 106905..107648 - 744 WP_000205704.1 conjugal transfer pilus acetylase TraX -
GPL39_RS23940 () 107668..112938 - 5271 WP_053320757.1 Multifunctional conjugation protein TraI Relaxase
GPL39_RS23945 () 112938..115226 - 2289 WP_165887189.1 Coupling protein TraD VF
GPL39_RS23950 () 115479..116210 - 732 WP_000850424.1 complement resistance protein TraT -
GPL39_RS23955 () 116242..116745 - 504 WP_053320762.1 surface exclusion protein -
GPL39_RS23960 () 116760..119582 - 2823 WP_053320755.1 conjugal transfer mating pair stabilization protein TraG -
GPL39_RS23965 () 119579..120952 - 1374 WP_065800514.1 conjugal transfer protein TraH -
GPL39_RS23970 () 120952..121314 - 363 WP_001443292.1 P-type conjugative transfer protein TrbJ -
GPL39_RS23975 () 121244..121789 - 546 WP_000052618.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
GPL39_RS23980 () 121776..122057 - 282 WP_000549795.1 type-F conjugative transfer system pilin chaperone TraQ -
GPL39_RS23985 () 122173..122916 - 744 WP_001030376.1 type-F conjugative transfer system pilin assembly protein TraF -
GPL39_RS23990 () 122909..123169 - 261 WP_000864348.1 conjugal transfer protein TrbE -
GPL39_RS23995 () 123196..125004 - 1809 WP_000821845.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
GPL39_RS24000 () 125001..125639 - 639 WP_000777691.1 type-F conjugative transfer system pilin assembly protein TrbC -
GPL39_RS24005 () 125648..126640 - 993 WP_053320745.1 conjugal transfer pilus assembly protein TraU -
GPL39_RS24010 () 126637..127269 - 633 WP_001749440.1 type-F conjugative transfer system protein TraW -
GPL39_RS24015 () 127266..127652 - 387 WP_000099687.1 type-F conjugative transfer system protein TrbI -
GPL39_RS24020 () 127649..130276 - 2628 WP_001064265.1 type IV secretion system protein TraC -
GPL39_RS24025 () 130436..130657 - 222 WP_001278692.1 conjugal transfer protein TraR -
GPL39_RS24030 () 130792..131307 - 516 WP_000724019.1 type IV conjugative transfer system lipoprotein TraV -
GPL39_RS24035 () 131304..131672 - 369 WP_071787938.1 conjugal transfer protein TrbD -
GPL39_RS24040 () 131611..132198 - 588 WP_053320746.1 conjugal transfer protein TraP -
GPL39_RS24045 () 132188..133615 - 1428 WP_000146672.1 conjugal transfer protein TraB -
GPL39_RS24050 () 133615..134319 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
GPL39_RS24055 () 134330..134896 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
GPL39_RS24060 () 134918..135229 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
GPL39_RS24065 () 135234..135596 - 363 WP_000994784.1 type IV conjugative transfer system pilin TraA -
GPL39_RS24070 () 135629..136024 - 396 WP_053320748.1 conjugal transfer relaxosome protein TraY -
GPL39_RS24075 () 136123..136812 - 690 WP_000283380.1 conjugal transfer transcriptional regulator TraJ -
GPL39_RS24080 () 136999..137382 - 384 WP_053320747.1 relaxosome protein TraM -
GPL39_RS24085 () 137703..138305 + 603 WP_000243709.1 hypothetical protein VF
GPL39_RS24090 () 138602..139423 - 822 WP_001234469.1 DUF945 domain-containing protein -
GPL39_RS24095 () 139545..139832 - 288 WP_000107535.1 hypothetical protein -
GPL39_RS24615 () 139857..140063 - 207 WP_000547939.1 hypothetical protein -
GPL39_RS24105 () 141035..142702 + 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
GPL39_RS24110 () 143097..143255 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 143299..143523 - 225 NuclAT_0 - Antitoxin Detail
- () 143299..143523 - 225 NuclAT_0 - Antitoxin Detail
- () 143299..143523 - 225 NuclAT_0 - Antitoxin Detail
- () 143299..143523 - 225 NuclAT_0 - Antitoxin Detail
GPL39_RS24115 () 143335..143523 + 189 WP_001299721.1 hypothetical protein -
GPL39_RS24120 () 143535..144254 - 720 WP_001276228.1 plasmid SOS inhibition protein A -
GPL39_RS24125 () 144251..144685 - 435 WP_000845934.1 conjugation system SOS inhibitor PsiB -
GPL39_RS24130 () 144740..146698 - 1959 WP_023148339.1 ParB/RepB/Spo0J family partition protein -
GPL39_RS24135 () 146764..146997 - 234 WP_000005990.1 DUF905 family protein -
GPL39_RS24140 () 147060..147599 - 540 WP_000290791.1 single-stranded DNA-binding protein -
GPL39_RS24155 () 148803..150470 + 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
GPL39_RS24165 () 150821..151384 - 564 WP_001299724.1 class I SAM-dependent methyltransferase -
GPL39_RS24170 () 151433..152794 - 1362 WP_000170715.1 DUF3560 domain-containing protein -
GPL39_RS24175 () 152846..153076 - 231 WP_000218642.1 hypothetical protein -
GPL39_RS24620 () 153590..154106 + 517 Protein_164 hypothetical protein -
GPL39_RS24185 () 154076..154267 - 192 WP_065800505.1 hypothetical protein -
GPL39_RS24190 () 154264..154728 - 465 WP_072657562.1 DUF1380 family protein -
GPL39_RS24195 () 154728..155030 - 303 WP_072256028.1 antirestriction protein -
GPL39_RS24205 () 155555..156319 + 765 Protein_168 IS110 family transposase ISEc32 Transposase
GPL39_RS24210 () 156333..157030 - 698 Protein_169 IS1 family transposase -
GPL39_RS24215 () 157084..157416 - 333 Protein_170 hypothetical protein -
GPL39_RS24625 () 157485..157823 - 339 WP_001513511.1 hypothetical protein -
GPL39_RS24230 () 158721..159692 - 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
GPL39_RS24235 () 159692..160858 - 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
GPL39_RS24240 () 161158..161855 - 698 Protein_174 IS1 family transposase -
GPL39_RS24245 () 162011..163513 - 1503 WP_072657541.1 hypothetical protein -
GPL39_RS24250 () 164132..164581 - 450 WP_000238252.1 hypothetical protein -
GPL39_RS24255 () 164699..165178 + 480 WP_000190053.1 hypothetical protein -
GPL39_RS24260 () 165618..165845 + 228 Protein_178 malate dehydrogenase -
GPL39_RS24265 () 165842..165973 - 132 Protein_179 phosphopyruvate hydratase -
GPL39_RS24270 () 165971..166228 + 258 Protein_180 Tn3 family transposase -
GPL39_RS24275 () 166462..167319 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
GPL39_RS24280 () 167316..168173 - 858 WP_000992806.1 Manganese transport system membrane protein MntB ARG
GPL39_RS24285 () 168170..168997 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
GPL39_RS24290 () 168997..169911 - 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
GPL39_RS24295 () 170267..170964 + 698 Protein_185 IS1 family transposase -
GPL39_RS24300 () 171144..171657 - 514 Protein_186 DUF4113 domain-containing protein -
GPL39_RS24305 () 171718..171822 - 105 Protein_187 AAA family ATPase -
GPL39_RS24310 () 171824..172147 - 324 Protein_188 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance