MGE detailed information
MGE type: Prophage MGE length: 49396 bp
Accession: NZ_CP046539 Location: 340836..390231 Organism: Escherichia coli strain FHI_NMBU_10 Replicon: chromosome
Accession: NZ_CP046539 Location: 340836..390231 Organism: Escherichia coli strain FHI_NMBU_10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOE21_RS01580 () | 341284..342081 | - | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
| GOE21_RS01590 () | 342317..343342 | - | 1026 | WP_000533611.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GOE21_RS01595 () | 343342..343545 | - | 204 | WP_000096347.1 | DUF4224 domain-containing protein | - |
| GOE21_RS01600 () | 343604..346048 | - | 2445 | WP_044809020.1 | exonuclease | - |
| GOE21_RS01605 () | 346141..346329 | - | 189 | WP_033885206.1 | DUF1482 family protein | - |
| GOE21_RS01610 () | 346326..346514 | - | 189 | WP_000449173.1 | cell division inhibitor | - |
| GOE21_RS01615 () | 347316..347717 | - | 402 | WP_096853748.1 | hypothetical protein | - |
| GOE21_RS01620 () | 347729..347881 | - | 153 | WP_062863539.1 | DUF1391 family protein | - |
| GOE21_RS01625 () | 348149..348439 | - | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GOE21_RS01630 () | 348439..348630 | - | 192 | WP_000100895.1 | hypothetical protein | Antitoxin Detail |
| GOE21_RS01635 () | 348648..349148 | - | 501 | WP_000824162.1 | helix-turn-helix transcriptional regulator | - |
| GOE21_RS01640 () | 349256..349531 | + | 276 | WP_042969575.1 | helix-turn-helix domain-containing protein | - |
| GOE21_RS01645 () | 349515..349940 | + | 426 | WP_000693925.1 | Rha family transcriptional regulator | - |
| GOE21_RS01650 () | 350009..351046 | + | 1038 | WP_062863540.1 | hypothetical protein | - |
| GOE21_RS01655 () | 350958..351500 | + | 543 | WP_072130322.1 | replication protein | - |
| GOE21_RS01660 () | 351534..352250 | + | 717 | WP_062871713.1 | DUF1627 domain-containing protein | - |
| GOE21_RS01665 () | 352283..352564 | + | 282 | WP_062877284.1 | hypothetical protein | - |
| GOE21_RS01670 () | 352561..352866 | + | 306 | WP_044808070.1 | DUF4406 domain-containing protein | - |
| GOE21_RS01675 () | 353014..353196 | + | 183 | WP_001224672.1 | hypothetical protein | - |
| GOE21_RS01680 () | 353189..353365 | + | 177 | WP_000753060.1 | hypothetical protein | - |
| GOE21_RS01685 () | 353362..353877 | + | 516 | WP_033814887.1 | hypothetical protein | - |
| GOE21_RS01690 () | 354080..354379 | - | 300 | WP_000220600.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GOE21_RS01695 () | 354385..354642 | - | 258 | WP_001260977.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GOE21_RS01700 () | 354778..355056 | + | 279 | WP_001379655.1 | hypothetical protein | - |
| GOE21_RS01705 () | 355058..356107 | + | 1050 | WP_024210716.1 | DUF968 domain-containing protein | - |
| GOE21_RS01710 () | 356121..356495 | + | 375 | WP_000334846.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GOE21_RS01715 () | 356492..357313 | + | 822 | WP_000762902.1 | antitermination protein | - |
| GOE21_RS01720 () | 357539..357736 | + | 198 | WP_044809006.1 | hypothetical protein | - |
| GOE21_RS01725 () | 357887..358945 | + | 1059 | WP_000935524.1 | site-specific DNA-methyltransferase | - |
| GOE21_RS01745 () | 359407..359838 | + | 432 | WP_001380362.1 | tellurite resistance protein | - |
| GOE21_RS01750 () | 359835..359999 | + | 165 | WP_000216624.1 | DUF3927 family protein | - |
| GOE21_RS01755 () | 360301..360635 | - | 335 | Protein_338 | anti-adapter protein IraM | - |
| GOE21_RS01760 () | 360897..362864 | + | 1968 | WP_203062523.1 | SASA family carbohydrate esterase | - |
| GOE21_RS01765 () | 363015..363197 | + | 183 | WP_001379752.1 | DUF1378 family protein | - |
| GOE21_RS01770 () | 363223..363468 | + | 246 | WP_001290219.1 | DUF826 domain-containing protein | - |
| GOE21_RS01775 () | 363545..363760 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| GOE21_RS01780 () | 363764..364321 | + | 558 | WP_062876850.1 | hypothetical protein | - |
| GOE21_RS01785 () | 364358..364891 | + | 534 | WP_033806596.1 | lysozyme | - |
| GOE21_RS01790 () | 365165..365734 | + | 570 | WP_021574142.1 | hypothetical protein | - |
| GOE21_RS01795 () | 365734..365883 | + | 150 | WP_032151794.1 | hypothetical protein | - |
| GOE21_RS01800 () | 366004..366771 | + | 768 | WP_033806597.1 | DNA adenine methylase | - |
| GOE21_RS01805 () | 367009..367194 | + | 186 | WP_122994552.1 | Rz1 family lipoprotein | - |
| GOE21_RS01810 () | 367280..367504 | + | 225 | WP_033800741.1 | hypothetical protein | - |
| GOE21_RS01815 () | 367960..368469 | + | 510 | WP_000235436.1 | terminase small subunit | - |
| GOE21_RS01820 () | 368441..370369 | + | 1929 | WP_044721865.1 | phage terminase large subunit family protein | - |
| GOE21_RS01825 () | 370353..370559 | + | 207 | WP_000259002.1 | head-tail joining protein | - |
| GOE21_RS01830 () | 370556..372148 | + | 1593 | WP_086257786.1 | phage portal protein | - |
| GOE21_RS01835 () | 372138..373643 | + | 1506 | WP_086257787.1 | S49 family peptidase | - |
| GOE21_RS01840 () | 373680..374027 | + | 348 | WP_000256795.1 | head decoration protein | - |
| GOE21_RS01845 () | 374085..375113 | + | 1029 | WP_000522634.1 | major capsid protein | - |
| GOE21_RS01850 () | 375165..375548 | + | 384 | WP_033804228.1 | DNA-packaging protein FI | - |
| GOE21_RS01855 () | 375541..375894 | + | 354 | WP_001204533.1 | tail attachment protein | - |
| GOE21_RS01860 () | 375910..376488 | + | 579 | WP_000234888.1 | phage tail protein | - |
| GOE21_RS01865 () | 376485..376880 | + | 396 | WP_021574153.1 | phage minor tail U family protein | - |
| GOE21_RS01870 () | 376888..377637 | + | 750 | WP_063105109.1 | phage tail protein | - |
| GOE21_RS01875 () | 377654..378085 | + | 432 | WP_033806765.1 | phage minor tail protein G | - |
| GOE21_RS01880 () | 378112..378525 | + | 414 | WP_071997252.1 | phage tail assembly protein T | - |
| GOE21_RS01885 () | 378506..381067 | + | 2562 | WP_096852418.1 | phage tail tape measure protein | - |
| GOE21_RS01890 () | 381064..381393 | + | 330 | WP_000847280.1 | phage tail protein | - |
| GOE21_RS01895 () | 381393..382091 | + | 699 | WP_203062524.1 | phage minor tail protein L | - |
| GOE21_RS01900 () | 382102..382845 | + | 744 | WP_203062525.1 | C40 family peptidase | - |
| GOE21_RS01905 () | 382791..383423 | + | 633 | WP_124071339.1 | tail assembly protein | - |
| GOE21_RS01910 () | 383848..387315 | + | 3468 | WP_203062526.1 | host specificity protein J | - |
| GOE21_RS01915 () | 387514..387654 | + | 141 | WP_000078854.1 | Hok/Gef family protein | - |
| GOE21_RS01920 () | 387797..389524 | + | 1728 | WP_203062527.1 | ISNCY family transposase KIS | Transposase |
| GOE21_RS01925 () | 389566..390231 | + | 666 | WP_203062528.1 | DUF4376 domain-containing protein | - |
| GOE21_RS01930 () | 390723..391994 | + | 1272 | WP_062872231.1 | YadA-like family protein | - |
| GOE21_RS01935 () | 392082..392555 | + | 474 | WP_024175323.1 | hypothetical protein | - |
| GOE21_RS01940 () | 392846..393178 | - | 333 | Protein_375 | YkgJ family cysteine cluster protein | - |
| GOE21_RS01945 () | 394018..394548 | - | 531 | WP_001079074.1 | cytochrome b | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|