MGE detailed information
MGE type: Genomic_island MGE length: 18720 bp
Accession: NZ_CP046527 Location: 2544012..2562731 Organism: Escherichia coli strain RM19259 Replicon: chromosome
Accession: NZ_CP046527 Location: 2544012..2562731 Organism: Escherichia coli strain RM19259 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GN312_RS12825 () | 2539163..2540341 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| GN312_RS12830 () | 2540409..2541251 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| GN312_RS12835 () | 2541517..2543700 | - | 2184 | WP_000535062.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| GN312_RS12840 () | 2544012..2544278 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| GN312_RS12845 () | 2544275..2545042 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| GN312_RS12850 () | 2545052..2546203 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| GN312_RS12855 () | 2546319..2547590 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| GN312_RS12860 () | 2547631..2548863 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| GN312_RS12865 () | 2549330..2550082 | + | 753 | Protein_2392 | Recombination-promoting nuclease RpnD | VF |
| GN312_RS28010 () | 2550087..2550287 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| GN312_RS12870 () | 2550530..2551942 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| GN312_RS12875 () | 2552119..2552283 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| GN312_RS12880 () | 2552380..2553261 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| GN312_RS12885 () | 2553309..2554472 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| GN312_RS12890 () | 2554519..2554860 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2554855..2554931 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| GN312_RS12895 () | 2555081..2556835 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| GN312_RS12900 () | 2556835..2558303 | - | 1469 | Protein_2400 | N-6 DNA methylase | - |
| GN312_RS12905 () | 2558370..2560802 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| GN312_RS12910 () | 2561080..2561364 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| GN312_RS12915 () | 2561373..2562731 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| GN312_RS12920 () | 2562800..2563756 | - | 957 | WP_001297640.1 | GTPase | - |
| GN312_RS12925 () | 2563767..2563970 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| GN312_RS12930 () | 2564020..2566170 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| GN312_RS12935 () | 2566463..2567005 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |