MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98304 bp
Accession: NZ_CP046526 Location: 1..98304 Organism: Escherichia coli strain RM19259 Replicon: plasmid pRM19259
Accession: NZ_CP046526 Location: 1..98304 Organism: Escherichia coli strain RM19259 Replicon: plasmid pRM19259
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GN312_RS00005 () | 77..1248 | + | 1172 | Protein_0 | IS3 family transposase ISLad1 | Transposase |
| GN312_RS00010 () | 1789..2304 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| GN312_RS00015 () | 2306..5302 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| GN312_RS00020 () | 5352..7472 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| GN312_RS00025 () | 7476..8915 | + | 1440 | WP_001213542.1 | Hemolysin secretion protein D, chromosomal | VF |
| GN312_RS27885 () | 9036..9528 | + | 493 | Protein_5 | Transcriptional repressor MprA | VF |
| GN312_RS00040 () | 9659..9889 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| GN312_RS00045 () | 10010..10750 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| GN312_RS00050 () | 11035..12012 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| GN312_RS00055 () | 12420..12620 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| GN312_RS00060 () | 12617..13237 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| GN312_RS00065 () | 13234..13917 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| GN312_RS00070 () | 14376..14594 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| GN312_RS00085 () | 15915..16214 | + | 300 | WP_027868286.1 | type II toxin-antitoxin system toxin CcdB | - |
| GN312_RS00090 () | 16215..17021 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| GN312_RS00105 () | 19033..19788 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| GN312_RS00110 () | 20376..21542 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| GN312_RS00115 () | 21542..22513 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GN312_RS00120 () | 23208..24110 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| GN312_RS00125 () | 24114..24419 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| GN312_RS00130 () | 24496..25179 | + | 684 | WP_000085945.1 | DNA methylase | - |
| GN312_RS00135 () | 25180..25401 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| GN312_RS00140 () | 25295..25849 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| GN312_RS27890 () | 25895..26671 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| GN312_RS00155 () | 26979..27281 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| GN312_RS00160 () | 27328..27750 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| GN312_RS00165 () | 27747..27938 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| GN312_RS27895 () | 27908..28417 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| GN312_RS00175 () | 28934..29164 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| GN312_RS00180 () | 29216..30577 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| GN312_RS00185 () | 30624..31187 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| GN312_RS00190 () | 31273..31722 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| GN312_RS27900 () | 31792..31998 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| GN312_RS00195 () | 32024..32476 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| GN312_RS00200 () | 32533..32766 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| GN312_RS00205 () | 32832..34790 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| GN312_RS00210 () | 34845..35279 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| GN312_RS00215 () | 35276..36037 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 36006..36204 | + | 199 | NuclAT_0 | - | - |
| - () | 36006..36204 | + | 199 | NuclAT_0 | - | - |
| - () | 36006..36204 | + | 199 | NuclAT_0 | - | - |
| - () | 36006..36204 | + | 199 | NuclAT_0 | - | - |
| GN312_RS00220 () | 36269..36427 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| GN312_RS00225 () | 36561..38582 | + | 2022 | Protein_41 | hypothetical protein | Relaxase |
| GN312_RS00230 () | 38650..39081 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| GN312_RS00235 () | 39746..40095 | - | 350 | Protein_43 | IS3 family transposase IS3H | Transposase |
| GN312_RS00240 () | 40189..40452 | + | 264 | Protein_44 | IS21 family transposase ISEc62 | Transposase |
| GN312_RS00245 () | 40492..40612 | + | 121 | Protein_45 | IS21 family transposase ISEc62 | Transposase |
| GN312_RS00250 () | 40609..40761 | + | 153 | Protein_46 | IS1 family transposase | - |
| GN312_RS00255 () | 40868..50377 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| GN312_RS00260 () | 50451..50675 | + | 225 | Protein_48 | IS3 family transposase IS3H | Transposase |
| GN312_RS00265 () | 50743..50913 | - | 171 | Protein_49 | IS3 family transposase IS1203 | Transposase |
| GN312_RS00270 () | 50920..51171 | - | 252 | Protein_50 | IS3 family transposase IS1203 | Transposase |
| GN312_RS00275 () | 51228..52616 | + | 1389 | Protein_51 | Multifunctional conjugation protein TraI | Relaxase |
| GN312_RS00280 () | 52636..53382 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| GN312_RS00285 () | 53441..54301 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| GN312_RS00290 () | 54404..54964 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| GN312_RS00295 () | 55097..55309 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| GN312_RS00300 () | 55554..56015 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| GN312_RS00305 () | 56061..56270 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| GN312_RS00310 () | 56308..56646 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| GN312_RS00315 () | 56886..57140 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| GN312_RS00320 () | 57376..57450 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| GN312_RS00325 () | 57443..58300 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| GN312_RS00330 () | 59212..59496 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GN312_RS00335 () | 59496..59771 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GN312_RS00340 () | 59866..60072 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| GN312_RS00345 () | 60172..60387 | - | 216 | Protein_65 | transposase | - |
| GN312_RS00350 () | 60431..60997 | - | 567 | Protein_66 | IS3 family transposase ISSd1 | Transposase |
| GN312_RS00355 () | 60997..61413 | - | 417 | Protein_67 | IS91 family transposase | - |
| GN312_RS00360 () | 61413..61598 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| GN312_RS00365 () | 61775..63985 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| GN312_RS00370 () | 64029..64418 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| GN312_RS00375 () | 64475..65463 | + | 989 | Protein_71 | IS3 family transposase IS629 | Transposase |
| GN312_RS00385 () | 65644..69546 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| GN312_RS00390 () | 69802..70283 | - | 482 | Protein_73 | IS1 family transposase IS1N | Transposase |
| GN312_RS00400 () | 71725..72546 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| GN312_RS00405 () | 72546..73652 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| GN312_RS00410 () | 73742..75463 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| GN312_RS00415 () | 75537..76535 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| GN312_RS00420 () | 76588..76776 | + | 189 | Protein_78 | hypothetical protein | - |
| GN312_RS00425 () | 76903..77283 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| GN312_RS00430 () | 77280..77627 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| GN312_RS00435 () | 77677..79215 | + | 1539 | WP_000998051.1 | IS66 family transposase ISEc8 | Transposase |
| GN312_RS27905 () | 79330..79416 | - | 87 | Protein_82 | IS3 family transposase ISEhe3 | Transposase |
| GN312_RS00440 () | 79851..82547 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| GN312_RS00445 () | 82634..83509 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| GN312_RS00450 () | 83510..85477 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| GN312_RS00455 () | 85477..86982 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| GN312_RS00460 () | 86984..88207 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| GN312_RS00465 () | 88238..88672 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| GN312_RS00470 () | 88669..89223 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| GN312_RS00475 () | 89238..89585 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| GN312_RS00480 () | 89582..90181 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| GN312_RS00485 () | 90178..91155 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| GN312_RS00490 () | 91194..92366 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| GN312_RS00495 () | 92353..92865 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| GN312_RS00500 () | 92923..93756 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| GN312_RS00505 () | 93848..94249 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| GN312_RS00510 () | 94428..95599 | + | 1172 | Protein_97 | IS3 family transposase ISLad1 | Transposase |
| GN312_RS00515 () | 96140..96655 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| GN312_RS00520 () | 96657..98304 | + | 1648 | Protein_99 | enterohemolysin EhxA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|