MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 81150 bp
Accession: NZ_CP046524 Location: 696873..778022 Organism: Streptococcus oralis strain SOT Replicon: chromosome
Accession: NZ_CP046524 Location: 696873..778022 Organism: Streptococcus oralis strain SOT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOM47_RS03590 (GOM47_03580) | 693029..693898 | + | 870 | WP_235081115.1 | homoserine kinase | - |
| GOM47_RS03595 (GOM47_03585) | 694150..695088 | + | 939 | WP_235081116.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| GOM47_RS03600 (GOM47_03590) | 695147..696871 | + | 1725 | WP_235081117.1 | ABC transporter ATP-binding protein | - |
| GOM47_RS03605 (GOM47_03595) | 696873..698621 | + | 1749 | WP_235081118.1 | putative ABC transporter ATP-binding protein | VF |
| GOM47_RS03610 (GOM47_03600) | 698723..699982 | + | 1260 | WP_235081119.1 | TRZ/ATZ family protein | - |
| GOM47_RS03615 (GOM47_03605) | 700218..700718 | + | 501 | WP_070567620.1 | 50S ribosomal protein L10 | - |
| GOM47_RS03620 (GOM47_03610) | 700793..701158 | + | 366 | WP_235081120.1 | 50S ribosomal protein L7/L12 | - |
| GOM47_RS03625 (GOM47_03615) | 701360..701533 | + | 174 | WP_000159607.1 | hypothetical protein | - |
| GOM47_RS03630 (GOM47_03620) | 701530..702309 | + | 780 | WP_000822762.1 | replication initiator protein A | - |
| GOM47_RS03635 (GOM47_03625) | 702408..703766 | + | 1359 | WP_001210970.1 | DNA (cytosine-5-)-methyltransferase | - |
| GOM47_RS03640 (GOM47_03630) | 703750..704199 | + | 450 | WP_000645888.1 | hypothetical protein | - |
| GOM47_RS03645 (GOM47_03635) | 704192..704572 | + | 381 | WP_000566538.1 | hypothetical protein | - |
| GOM47_RS03650 (GOM47_03640) | 704585..704818 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| GOM47_RS03655 (GOM47_03645) | 704821..705408 | + | 588 | WP_000821310.1 | CPBP family intramembrane metalloprotease | - |
| GOM47_RS03660 (GOM47_03650) | 705539..706129 | + | 591 | WP_000227920.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| GOM47_RS03665 (GOM47_03655) | 706129..706965 | + | 837 | WP_000492396.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GOM47_RS03670 (GOM47_03660) | 707248..707547 | + | 300 | WP_000869753.1 | hypothetical protein | - |
| GOM47_RS03675 (GOM47_03665) | 707537..708025 | + | 489 | WP_000093683.1 | hypothetical protein | - |
| GOM47_RS03680 (GOM47_03670) | 708025..709902 | + | 1878 | WP_000286823.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GOM47_RS03685 (GOM47_03675) | 709923..710165 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| GOM47_RS03690 (GOM47_03680) | 710182..711036 | + | 855 | WP_235081121.1 | conjugal transfer protein TrbL | - |
| GOM47_RS03695 (GOM47_03685) | 711090..711449 | + | 360 | WP_001097591.1 | PrgI family protein | - |
| GOM47_RS03700 (GOM47_03690) | 711400..713757 | + | 2358 | WP_171964974.1 | AAA family ATPase | - |
| GOM47_RS03705 (GOM47_03695) | 713769..716582 | + | 2814 | WP_000653450.1 | phage tail tip lysozyme | - |
| GOM47_RS03710 (GOM47_03700) | 716617..717225 | - | 609 | WP_024478356.1 | hypothetical protein | - |
| GOM47_RS03715 | 717227..717391 | - | 165 | WP_171964973.1 | hypothetical protein | - |
| GOM47_RS03720 (GOM47_03705) | 717447..717710 | - | 264 | WP_074192753.1 | hypothetical protein | - |
| GOM47_RS03725 (GOM47_03710) | 717852..718262 | + | 411 | WP_000387508.1 | thrombospondin type 3 repeat-containing protein | - |
| GOM47_RS03730 (GOM47_03715) | 718310..724528 | + | 6219 | WP_024478355.1 | DEAD/DEAH box helicase family protein | - |
| GOM47_RS03735 (GOM47_03720) | 724603..724887 | + | 285 | WP_000969635.1 | DUF5962 family protein | - |
| GOM47_RS03740 (GOM47_03725) | 724901..725197 | + | 297 | WP_024478354.1 | DUF5966 family protein | - |
| GOM47_RS03745 (GOM47_03730) | 725211..725408 | - | 198 | WP_002876112.1 | hypothetical protein | - |
| GOM47_RS03750 (GOM47_03735) | 725568..726209 | + | 642 | WP_000933087.1 | hypothetical protein | - |
| GOM47_RS03755 (GOM47_03740) | 726219..727304 | + | 1086 | WP_000401910.1 | toprim domain-containing protein | - |
| GOM47_RS03760 (GOM47_03745) | 727355..727588 | + | 234 | WP_000152425.1 | DUF5965 family protein | - |
| GOM47_RS03765 (GOM47_03750) | 727585..727968 | + | 384 | WP_000159224.1 | DUF5945 family protein | - |
| GOM47_RS03770 (GOM47_03755) | 728006..728278 | + | 273 | WP_000494441.1 | hypothetical protein | - |
| GOM47_RS03775 (GOM47_03760) | 728346..728822 | + | 477 | WP_000579610.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| GOM47_RS03780 (GOM47_03765) | 728822..729574 | + | 753 | WP_000405374.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| GOM47_RS03785 (GOM47_03770) | 729623..729901 | + | 279 | WP_000423012.1 | hypothetical protein | - |
| GOM47_RS03790 | 729959..730171 | + | 213 | WP_000521157.1 | hypothetical protein | - |
| GOM47_RS03795 | 730192..730398 | + | 207 | WP_050078263.1 | hypothetical protein | - |
| GOM47_RS03800 (GOM47_03780) | 730595..731491 | - | 897 | WP_050078262.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GOM47_RS03805 (GOM47_03785) | 731584..732567 | + | 984 | WP_050198294.1 | hypothetical protein | - |
| GOM47_RS03810 (GOM47_03790) | 732564..733277 | - | 714 | WP_050198293.1 | methyltransferase domain-containing protein | - |
| GOM47_RS03815 (GOM47_03795) | 733925..735994 | + | 2070 | WP_050198295.1 | AAA family ATPase | - |
| GOM47_RS03820 (GOM47_03800) | 735981..737798 | + | 1818 | WP_024478122.1 | ATP-dependent helicase | - |
| GOM47_RS03825 (GOM47_03805) | 737884..739059 | - | 1176 | WP_024478123.1 | ATP-binding protein | - |
| GOM47_RS03830 (GOM47_03810) | 739421..739777 | + | 357 | WP_000817622.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| GOM47_RS03835 (GOM47_03815) | 739782..740147 | + | 366 | WP_000401233.1 | MobC family plasmid mobilization relaxosome protein | - |
| GOM47_RS03840 (GOM47_03820) | 740134..741957 | + | 1824 | WP_000237141.1 | SAG1250 family conjugative relaxase | - |
| GOM47_RS03845 (GOM47_03825) | 742221..742409 | + | 189 | WP_050215293.1 | conjugative relaxase-related protein | - |
| GOM47_RS03850 (GOM47_03830) | 742514..743377 | - | 864 | WP_001093611.1 | helix-turn-helix transcriptional regulator | - |
| GOM47_RS09645 (GOM47_03835) | 743569..743739 | + | 171 | WP_001227861.1 | PhrA family quorum-sensing system peptide | - |
| GOM47_RS03855 (GOM47_03845) | 744141..744455 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| GOM47_RS03860 (GOM47_03850) | 744471..744857 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| GOM47_RS03865 (GOM47_03855) | 744886..746271 | + | 1386 | WP_000813488.1 | FtsK/SpoIIIE domain-containing protein | - |
| GOM47_RS03870 (GOM47_03860) | 746274..746426 | + | 153 | WP_000879507.1 | hypothetical protein | - |
| GOM47_RS03875 (GOM47_03865) | 746449..747654 | + | 1206 | WP_000398284.1 | MobT family relaxase | - |
| GOM47_RS03880 (GOM47_03870) | 747697..747918 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| GOM47_RS03885 (GOM47_03875) | 748035..748532 | + | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| GOM47_RS03890 (GOM47_03880) | 748621..749013 | + | 393 | WP_000723888.1 | conjugal transfer protein | - |
| GOM47_RS03895 (GOM47_03885) | 748997..751444 | + | 2448 | WP_000331160.1 | ATP-binding protein | - |
| GOM47_RS03900 (GOM47_03890) | 751447..753624 | + | 2178 | WP_000804748.1 | membrane protein | - |
| GOM47_RS03905 (GOM47_03895) | 753621..754622 | + | 1002 | WP_000769868.1 | putative endopeptidase p60 | VF |
| GOM47_RS03910 (GOM47_03900) | 754619..755554 | + | 936 | WP_001224320.1 | conjugal transfer protein | - |
| GOM47_RS03915 (GOM47_03905) | 755799..755915 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| GOM47_RS03920 (GOM47_03910) | 755931..757850 | + | 1920 | WP_130884523.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| GOM47_RS03925 (GOM47_03915) | 757969..758136 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| GOM47_RS03930 (GOM47_03920) | 758196..758333 | - | 138 | Protein_724 | XRE family transcriptional regulator | - |
| GOM47_RS03935 (GOM47_03930) | 758750..758833 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| GOM47_RS03940 (GOM47_03935) | 758958..759695 | + | 738 | WP_001038790.1 | rRNA adenine N-6-methyltransferase | ARG |
| GOM47_RS03945 (GOM47_03945) | 760050..760604 | + | 555 | WP_000576156.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| GOM47_RS03950 (GOM47_03950) | 760608..763526 | + | 2919 | WP_001240982.1 | Tn3 family transposase Tn4430 | Transposase |
| GOM47_RS03955 (GOM47_03955) | 763600..763821 | - | 222 | Protein_729 | helix-turn-helix domain-containing protein | - |
| GOM47_RS03960 (GOM47_03965) | 764326..764748 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| GOM47_RS03965 (GOM47_03970) | 764745..764975 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| GOM47_RS03970 (GOM47_03975) | 765201..765452 | - | 252 | WP_001845478.1 | hypothetical protein | - |
| GOM47_RS03975 (GOM47_03980) | 765436..765639 | + | 204 | WP_000814511.1 | excisionase | - |
| GOM47_RS03980 (GOM47_03985) | 765721..766938 | + | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GOM47_RS03985 (GOM47_03995) | 768007..768237 | + | 231 | WP_000256953.1 | hypothetical protein | - |
| GOM47_RS03990 (GOM47_04000) | 768551..769108 | + | 558 | WP_001270298.1 | hypothetical protein | - |
| GOM47_RS03995 (GOM47_04005) | 769218..770993 | + | 1776 | WP_000411094.1 | ABC transporter ATP-binding protein | - |
| GOM47_RS04000 (GOM47_04010) | 771029..772414 | + | 1386 | WP_171964981.1 | ATP-binding cassette domain-containing protein | - |
| GOM47_RS04005 | 772676..772930 | + | 255 | Protein_739 | IS30 family transposase | - |
| GOM47_RS04010 | 773042..773191 | + | 150 | WP_000462711.1 | hypothetical protein | - |
| GOM47_RS04015 (GOM47_04015) | 773365..774546 | + | 1182 | WP_002917258.1 | MFS transporter | - |
| GOM47_RS04020 (GOM47_04020) | 774711..774929 | + | 219 | WP_223842281.1 | helix-turn-helix transcriptional regulator | - |
| GOM47_RS04025 (GOM47_04025) | 776069..776287 | + | 219 | WP_023916206.1 | helix-turn-helix transcriptional regulator | - |
| GOM47_RS04030 (GOM47_04030) | 776594..776863 | + | 270 | WP_000450956.1 | DUF3173 family protein | - |
| GOM47_RS04035 (GOM47_04035) | 776835..778022 | + | 1188 | WP_002917255.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GOM47_RS04040 (GOM47_04040) | 778461..779027 | + | 567 | WP_235081122.1 | hypothetical protein | - |
| GOM47_RS04045 (GOM47_04045) | 779049..780395 | - | 1347 | WP_235081123.1 | NADP-specific glutamate dehydrogenase | - |
| GOM47_RS04050 (GOM47_04050) | 780630..781565 | + | 936 | WP_235081124.1 | dihydroorotate oxidase | - |
| GOM47_RS04055 (GOM47_04055) | 781599..782633 | + | 1035 | WP_235081125.1 | DNA polymerase III subunit delta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|