MGE detailed information
MGE type: Conjugative plasmid MGE length: 45971 bp
Accession: NZ_CP046443 Location: 1..45971 Organism: Pseudomonas coronafaciens pv. coronafaciens strain B19001 Replicon: plasmid unnamed2
Accession: NZ_CP046443 Location: 1..45971 Organism: Pseudomonas coronafaciens pv. coronafaciens strain B19001 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GMO17_RS27195 () | 1..1314 | + | 1314 | WP_024651588.1 | replication initiation protein | - |
| GMO17_RS27200 () | 1540..1833 | + | 294 | WP_024651587.1 | HU family DNA-binding protein | - |
| GMO17_RS27205 () | 1920..2105 | + | 186 | WP_003348562.1 | hypothetical protein | Antitoxin Detail |
| GMO17_RS27210 () | 2105..2398 | + | 294 | WP_003348565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GMO17_RS27215 () | 2538..3065 | + | 528 | WP_003348567.1 | hypothetical protein | - |
| GMO17_RS27220 () | 3062..3736 | - | 675 | WP_080269136.1 | Mobilization protein A | Relaxase |
| GMO17_RS27225 () | 4219..6249 | - | 2031 | WP_024651585.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| GMO17_RS27230 () | 6933..7385 | + | 453 | WP_122346733.1 | GNAT family N-acetyltransferase | - |
| GMO17_RS27235 () | 7399..8967 | - | 1569 | WP_191892899.1 | IS66 family transposase ISPpu19 | Transposase |
| GMO17_RS27240 () | 9029..9364 | - | 336 | WP_191892900.1 | IS66 family transposase ISPsy43 | Transposase |
| GMO17_RS27245 () | 9361..9729 | - | 369 | WP_191892901.1 | transposase | - |
| GMO17_RS27250 () | 10362..11648 | + | 1287 | WP_024670769.1 | group II intron reverse transcriptase/maturase | - |
| GMO17_RS27255 () | 11828..12433 | - | 606 | WP_005759898.1 | hypothetical protein | - |
| GMO17_RS27260 () | 12433..12606 | - | 174 | WP_005759896.1 | hypothetical protein | - |
| GMO17_RS27265 () | 12789..12980 | - | 192 | WP_010208571.1 | hypothetical protein | - |
| GMO17_RS27270 () | 12980..13666 | - | 687 | WP_024651584.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GMO17_RS27275 () | 13981..14613 | + | 633 | WP_003381804.1 | ParA family protein | - |
| GMO17_RS27280 () | 14649..14903 | + | 255 | WP_003381801.1 | hypothetical protein | - |
| GMO17_RS27285 () | 15542..16000 | + | 459 | WP_032636008.1 | hypothetical protein | - |
| GMO17_RS27290 () | 16263..16643 | - | 381 | WP_074929343.1 | hypothetical protein | - |
| GMO17_RS27295 () | 16889..17359 | - | 471 | WP_024651582.1 | hypothetical protein | - |
| GMO17_RS27300 () | 17447..17797 | - | 351 | WP_024651581.1 | helix-turn-helix transcriptional regulator | - |
| GMO17_RS27305 () | 18061..18588 | + | 528 | WP_024651580.1 | transcriptional regulator | - |
| GMO17_RS27310 () | 18654..18869 | + | 216 | WP_004666691.1 | hypothetical protein | - |
| GMO17_RS27315 () | 18898..19614 | + | 717 | WP_024651579.1 | Type IV secretion system protein virB1 | VF |
| GMO17_RS27320 () | 19614..19949 | + | 336 | WP_024651578.1 | hypothetical protein | - |
| GMO17_RS27325 () | 19962..20363 | + | 402 | Protein_26 | VirB3 family type IV secretion system protein | - |
| GMO17_RS27330 () | 20299..22851 | + | 2553 | WP_024651577.1 | VirB4 family type IV secretion system protein | - |
| GMO17_RS27335 () | 22848..23534 | + | 687 | WP_117144997.1 | P-type DNA transfer protein VirB5 | - |
| GMO17_RS27340 () | 23567..23920 | + | 354 | WP_024651575.1 | hypothetical protein | - |
| GMO17_RS27345 () | 23931..24863 | + | 933 | WP_024651574.1 | type IV secretion system protein | - |
| GMO17_RS27350 () | 24931..25236 | + | 306 | WP_074929351.1 | conjugal transfer protein | - |
| GMO17_RS27355 () | 25274..26062 | + | 789 | WP_024651573.1 | type IV secretion system protein | - |
| GMO17_RS27360 () | 26052..26861 | + | 810 | WP_024651572.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| GMO17_RS27365 () | 26848..28206 | + | 1359 | WP_191892896.1 | Type IV secretion system protein virB10 | VF |
| GMO17_RS27370 () | 28216..29274 | + | 1059 | WP_024651570.1 | Type IV secretion system protein VirB11 | VF |
| GMO17_RS27375 () | 29284..29640 | + | 357 | WP_024651569.1 | hypothetical protein | - |
| GMO17_RS27380 () | 29764..32187 | + | 2424 | WP_024651568.1 | ATP-binding protein | - |
| GMO17_RS27385 () | 32305..32547 | + | 243 | WP_024651567.1 | hypothetical protein | - |
| GMO17_RS27390 () | 32547..32765 | + | 219 | WP_024651604.1 | hypothetical protein | VF |
| GMO17_RS27395 () | 32762..32995 | + | 234 | WP_122367068.1 | hypothetical protein | - |
| GMO17_RS27400 () | 32995..34656 | + | 1662 | WP_191892897.1 | Conjugal transfer protein TraG | VF |
| GMO17_RS27405 () | 34696..35058 | + | 363 | WP_024651601.1 | Killer protein | - |
| GMO17_RS27410 () | 35086..37251 | + | 2166 | WP_024651600.1 | type IA DNA topoisomerase | - |
| GMO17_RS27415 () | 37278..37562 | + | 285 | WP_024651599.1 | hypothetical protein | - |
| GMO17_RS27420 () | 37590..38189 | + | 600 | WP_024651598.1 | single-stranded DNA-binding protein | - |
| GMO17_RS27425 () | 38230..38514 | + | 285 | WP_024651597.1 | hypothetical protein | - |
| GMO17_RS27430 () | 38815..39549 | + | 735 | WP_024651596.1 | hypothetical protein | - |
| GMO17_RS27435 () | 39546..40118 | + | 573 | WP_024651595.1 | hypothetical protein | - |
| GMO17_RS27440 () | 40145..40684 | - | 540 | WP_191892902.1 | hypothetical protein | - |
| GMO17_RS27445 () | 40899..41246 | + | 348 | WP_024651593.1 | hypothetical protein | Relaxase |
| GMO17_RS27450 () | 42230..42649 | + | 420 | WP_191892898.1 | hypothetical protein | - |
| GMO17_RS27455 () | 42964..45006 | + | 2043 | WP_024651590.1 | hypothetical protein | - |
| GMO17_RS27460 () | 45134..45562 | + | 429 | WP_024651589.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|