MGE detailed information
MGE type: Conjugative plasmid MGE length: 112911 bp
Accession: NZ_CP046442 Location: 1..112911 Organism: Pseudomonas coronafaciens pv. coronafaciens strain B19001 Replicon: plasmid unnamed1
Accession: NZ_CP046442 Location: 1..112911 Organism: Pseudomonas coronafaciens pv. coronafaciens strain B19001 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GMO17_RS26560 () | 1..1314 | + | 1314 | WP_122356782.1 | replication initiation protein | - |
| GMO17_RS26565 () | 1452..1877 | + | 426 | WP_010209623.1 | S24 family peptidase | - |
| GMO17_RS26570 () | 1855..3153 | + | 1299 | WP_191892892.1 | Y-family DNA polymerase | - |
| GMO17_RS26575 () | 3319..3642 | + | 324 | WP_054070434.1 | hypothetical protein | - |
| GMO17_RS26580 () | 3859..4740 | - | 882 | WP_122356402.1 | hypothetical protein | - |
| GMO17_RS26585 () | 4884..5390 | - | 507 | WP_191867953.1 | AAA family ATPase | - |
| GMO17_RS26590 () | 6123..7409 | + | 1287 | WP_024670769.1 | group II intron reverse transcriptase/maturase | - |
| GMO17_RS26595 () | 7611..8456 | - | 846 | WP_122354594.1 | hypothetical protein | - |
| GMO17_RS26600 () | 8645..8890 | - | 246 | WP_147458901.1 | hypothetical protein | - |
| GMO17_RS26605 () | 8924..9394 | - | 471 | WP_122354590.1 | putative addiction module antidote protein | - |
| GMO17_RS26610 () | 9391..9711 | - | 321 | WP_122354588.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GMO17_RS26615 () | 10042..11415 | - | 1374 | WP_183136694.1 | type III effector | - |
| GMO17_RS26620 () | 11720..11869 | + | 150 | Protein_12 | IS91 family transposase | - |
| GMO17_RS26625 () | 12533..12943 | + | 411 | WP_122354582.1 | hypothetical protein | - |
| GMO17_RS26630 () | 13281..13481 | + | 201 | WP_074809324.1 | hypothetical protein | - |
| GMO17_RS26635 () | 13594..14244 | + | 651 | WP_044423455.1 | AAA family ATPase | - |
| GMO17_RS26640 () | 14234..14521 | + | 288 | WP_024639839.1 | hypothetical protein | - |
| GMO17_RS26645 () | 14759..15392 | + | 634 | Protein_17 | SOS response-associated peptidase | - |
| GMO17_RS26650 () | 15645..15890 | + | 246 | WP_122354580.1 | Major pilu subunit operon regulatory protein PapB | VF |
| GMO17_RS26655 () | 15941..16342 | + | 402 | WP_147458900.1 | hypothetical protein | - |
| GMO17_RS26660 () | 16440..16688 | + | 249 | WP_122354576.1 | hypothetical protein | - |
| GMO17_RS26665 () | 16866..17123 | - | 258 | WP_080053524.1 | MerR family DNA-binding protein | - |
| GMO17_RS26670 () | 17118..18416 | + | 1299 | WP_191892893.1 | hypothetical protein | - |
| GMO17_RS26675 () | 18544..18921 | + | 378 | WP_088234447.1 | hypothetical protein | - |
| GMO17_RS26680 () | 18937..19887 | + | 951 | WP_122354572.1 | hypothetical protein | - |
| GMO17_RS26685 () | 19981..20151 | + | 171 | Protein_25 | antirestriction protein ArdR | - |
| GMO17_RS26690 () | 21190..21414 | + | 225 | WP_147458977.1 | hypothetical protein | - |
| GMO17_RS26695 () | 21685..22605 | + | 921 | WP_147458976.1 | hypothetical protein | - |
| GMO17_RS26700 () | 22657..22965 | + | 309 | WP_080268301.1 | DUF2845 domain-containing protein | - |
| GMO17_RS26705 () | 23613..24233 | - | 621 | WP_024671639.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GMO17_RS26710 () | 24544..25002 | + | 459 | WP_183136719.1 | hypothetical protein | - |
| GMO17_RS26715 () | 25436..25813 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| GMO17_RS26720 () | 25860..26696 | + | 837 | WP_122355213.1 | DUF945 domain-containing protein | - |
| GMO17_RS26725 () | 26754..26942 | + | 189 | WP_011107013.1 | hypothetical protein | - |
| GMO17_RS26730 () | 27015..27293 | - | 279 | WP_011107014.1 | mobilization protein | - |
| GMO17_RS26735 () | 27738..28067 | + | 330 | WP_191892894.1 | ribbon-helix-helix protein, CopG family | - |
| GMO17_RS26740 () | 28078..30030 | + | 1953 | WP_191892895.1 | Protein TraI | Relaxase |
| GMO17_RS26745 () | 30073..30249 | - | 177 | WP_081026764.1 | integrase | - |
| GMO17_RS26750 () | 30325..31167 | - | 843 | WP_060407440.1 | Transcriptional activator protein LasR | VF |
| GMO17_RS26755 () | 31225..31818 | - | 594 | WP_003344305.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| GMO17_RS26760 () | 31815..33281 | - | 1467 | WP_003344307.1 | 2-amino-4-deoxychorismate synthase | VF |
| GMO17_RS26765 () | 33910..35262 | + | 1353 | WP_046835403.1 | phenylacetate--CoA ligase family protein | - |
| GMO17_RS26770 () | 35268..35813 | + | 546 | WP_122354926.1 | acetyltransferase | - |
| GMO17_RS26775 () | 35815..36498 | + | 684 | WP_122354924.1 | iron-containing redox enzyme family protein | - |
| GMO17_RS26780 () | 36502..37119 | + | 618 | WP_057432623.1 | flavodoxin family protein | - |
| GMO17_RS26785 () | 37122..38030 | + | 909 | WP_057432625.1 | EamA family transporter | - |
| GMO17_RS26790 () | 38017..38967 | + | 951 | WP_057432626.1 | alpha/beta fold hydrolase | - |
| GMO17_RS26795 () | 39133..40149 | - | 1017 | Protein_47 | IS66 family transposase ISPsy43 | Transposase |
| GMO17_RS26800 () | 40173..41537 | - | 1365 | Protein_48 | restriction endonuclease subunit S | - |
| GMO17_RS26805 () | 42149..42415 | + | 267 | Protein_49 | helix-turn-helix transcriptional regulator | - |
| GMO17_RS26810 () | 42437..42622 | - | 186 | WP_031598237.1 | hypothetical protein | - |
| GMO17_RS26815 () | 42663..44009 | - | 1347 | WP_122355389.1 | MHS family MFS transporter | - |
| GMO17_RS26820 () | 44050..45243 | - | 1194 | WP_058886927.1 | L-2-hydroxyglutarate oxidase | - |
| GMO17_RS26825 () | 45311..46012 | - | 702 | WP_031598948.1 | FadR family transcriptional regulator | - |
| GMO17_RS26830 () | 46631..48580 | + | 1950 | WP_055004681.1 | putative signaling protein | VF |
| GMO17_RS26835 () | 49074..49259 | + | 186 | WP_081002928.1 | Com family DNA-binding transcriptional regulator | - |
| GMO17_RS26840 () | 49271..50566 | + | 1296 | WP_117140640.1 | glycoside hydrolase family 68 protein | - |
| GMO17_RS26845 () | 50646..51827 | + | 1182 | WP_117147873.1 | glycoside hydrolase family 10 protein | - |
| GMO17_RS26850 () | 52628..53251 | + | 624 | WP_055004217.1 | glycoside hydrolase family 25 protein | - |
| GMO17_RS26855 () | 54423..55955 | + | 1533 | WP_055004218.1 | hypothetical protein | - |
| GMO17_RS26860 () | 56557..57039 | - | 483 | WP_122356428.1 | hypothetical protein | - |
| GMO17_RS26865 () | 57307..57567 | - | 261 | WP_050586573.1 | hypothetical protein | - |
| GMO17_RS26870 () | 57953..58086 | + | 134 | Protein_62 | IS5 family transposase ISThi1 | Transposase |
| GMO17_RS26875 () | 58090..58611 | + | 522 | Protein_63 | AAA family ATPase | - |
| GMO17_RS26880 () | 58604..59026 | + | 423 | WP_122326270.1 | recombinase family protein | - |
| GMO17_RS26885 () | 59202..61472 | + | 2271 | WP_055004219.1 | hypothetical protein | - |
| GMO17_RS26890 () | 62204..62860 | + | 657 | WP_157973363.1 | DUF2971 domain-containing protein | - |
| GMO17_RS26895 () | 62955..63560 | - | 606 | WP_080268302.1 | histidine phosphatase family protein | - |
| GMO17_RS26900 () | 63800..64735 | - | 936 | WP_024671645.1 | syringolide biosynthetic protein AvrD1 | - |
| GMO17_RS26905 () | 65020..65652 | - | 633 | WP_024671646.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GMO17_RS26910 () | 65693..66112 | - | 420 | WP_005769733.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GMO17_RS26915 () | 66109..66366 | - | 258 | WP_024671647.1 | Arc family DNA-binding protein | Antitoxin Detail |
| GMO17_RS26920 () | 66716..67372 | + | 657 | WP_017684244.1 | hypothetical protein | - |
| GMO17_RS26925 () | 67420..67674 | + | 255 | WP_024671648.1 | hypothetical protein | - |
| GMO17_RS26930 () | 68059..68598 | + | 540 | WP_024671649.1 | hypothetical protein | - |
| GMO17_RS26935 () | 68858..69499 | + | 642 | WP_191867948.1 | SOS response-associated peptidase | - |
| GMO17_RS26940 () | 69874..70122 | + | 249 | WP_055004694.1 | hypothetical protein | - |
| GMO17_RS26945 () | 70169..70441 | - | 273 | WP_147458958.1 | hypothetical protein | - |
| GMO17_RS26950 () | 70490..70723 | + | 234 | WP_024669557.1 | hypothetical protein | - |
| GMO17_RS26955 () | 70736..70987 | + | 252 | WP_019331343.1 | hypothetical protein | - |
| GMO17_RS26960 () | 70997..71725 | + | 729 | WP_055004693.1 | hypothetical protein | - |
| GMO17_RS26965 () | 71753..71941 | + | 189 | WP_024668774.1 | hypothetical protein | - |
| GMO17_RS26970 () | 72618..73514 | - | 897 | WP_055004698.1 | hypothetical protein | - |
| GMO17_RS26975 () | 73950..74921 | - | 972 | WP_103391643.1 | ExeA family protein | - |
| GMO17_RS26980 () | 74911..76569 | - | 1659 | WP_122356430.1 | IS481 family transposase ISAzs36 | Transposase |
| GMO17_RS26985 () | 76553..77113 | - | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| GMO17_RS26990 () | 77424..77585 | - | 162 | Protein_86 | recombinase family protein | - |
| GMO17_RS26995 () | 78150..78812 | + | 663 | WP_024668838.1 | hypothetical protein | - |
| GMO17_RS27000 () | 79332..79984 | + | 653 | Protein_88 | type III secretion system effector protein | - |
| GMO17_RS27005 () | 80162..80386 | + | 225 | WP_024668840.1 | carbon storage regulator | - |
| GMO17_RS27010 () | 80409..81371 | - | 963 | WP_024668544.1 | IS91 family transposase ISTha3 | Transposase |
| GMO17_RS27015 () | 81589..82089 | + | 501 | WP_054071650.1 | Protein hcp1 | VF |
| GMO17_RS27020 () | 82114..82641 | + | 528 | WP_183136725.1 | DUF2778 domain-containing protein | - |
| GMO17_RS27025 () | 82641..82928 | + | 288 | WP_024690793.1 | hypothetical protein | - |
| GMO17_RS27030 () | 82956..83729 | - | 774 | WP_024670604.1 | Oxygen regulatory protein NreC | VF |
| GMO17_RS27035 () | 83838..84938 | + | 1101 | WP_122355340.1 | polyamine ABC transporter substrate-binding protein | - |
| GMO17_RS27040 () | 85244..85600 | - | 357 | WP_054990128.1 | helix-turn-helix domain-containing protein | - |
| GMO17_RS27045 () | 85845..86378 | + | 534 | WP_122355336.1 | transcriptional regulator | - |
| GMO17_RS27050 () | 86467..86709 | + | 243 | WP_183136724.1 | hypothetical protein | - |
| GMO17_RS27055 () | 86722..87438 | + | 717 | WP_122355333.1 | Type IV secretion system protein virB1 | VF |
| GMO17_RS27060 () | 87438..87773 | + | 336 | WP_005746160.1 | hypothetical protein | - |
| GMO17_RS27065 () | 87786..88187 | + | 402 | Protein_101 | VirB3 family type IV secretion system protein | - |
| GMO17_RS27070 () | 88123..90675 | + | 2553 | WP_191892889.1 | conjugal transfer protein | - |
| GMO17_RS27075 () | 90672..91358 | + | 687 | WP_053480206.1 | P-type DNA transfer protein VirB5 | - |
| GMO17_RS27080 () | 91391..91744 | + | 354 | WP_053480205.1 | hypothetical protein | - |
| GMO17_RS27085 () | 91755..92687 | + | 933 | WP_191892890.1 | type IV secretion system protein | - |
| GMO17_RS27090 () | 93098..93886 | + | 789 | WP_191892891.1 | type IV secretion system protein | - |
| GMO17_RS27095 () | 93876..94685 | + | 810 | WP_191867950.1 | P-type conjugative transfer protein VirB9 | - |
| GMO17_RS27100 () | 94672..96039 | + | 1368 | WP_122356802.1 | Type IV secretion system protein virB10 | VF |
| GMO17_RS27105 () | 96049..97107 | + | 1059 | WP_122356800.1 | Type IV secretion system protein VirB11 | VF |
| GMO17_RS27110 () | 97117..97473 | + | 357 | WP_054986451.1 | hypothetical protein | - |
| GMO17_RS27115 () | 97598..97828 | + | 231 | WP_054990090.1 | hypothetical protein | - |
| GMO17_RS27120 () | 97828..98046 | + | 219 | WP_122356796.1 | hypothetical protein | VF |
| GMO17_RS27125 () | 98043..98276 | + | 234 | WP_122356794.1 | hypothetical protein | - |
| GMO17_RS27130 () | 98276..99937 | + | 1662 | WP_122356792.1 | Protein VirD4 | VF |
| GMO17_RS27135 () | 99977..100339 | + | 363 | WP_024668911.1 | Killer protein | - |
| GMO17_RS27140 () | 100367..102532 | + | 2166 | WP_122356790.1 | type IA DNA topoisomerase | - |
| GMO17_RS27145 () | 102559..103323 | + | 765 | WP_053480610.1 | hypothetical protein | - |
| GMO17_RS27150 () | 103388..103993 | + | 606 | WP_074929414.1 | single-stranded DNA-binding protein | - |
| GMO17_RS27155 () | 104034..104318 | + | 285 | WP_117216514.1 | hypothetical protein | - |
| GMO17_RS27160 () | 104619..105353 | + | 735 | WP_053480615.1 | hypothetical protein | - |
| GMO17_RS27165 () | 105350..105922 | + | 573 | WP_122324620.1 | hypothetical protein | - |
| GMO17_RS27170 () | 105949..106488 | - | 540 | WP_074929365.1 | hypothetical protein | - |
| GMO17_RS27175 () | 106714..107439 | + | 726 | WP_122356788.1 | relaxosome protein | - |
| GMO17_RS27180 () | 107429..111229 | + | 3801 | WP_122356786.1 | hypothetical protein | Relaxase |
| GMO17_RS27185 () | 111360..112010 | + | 651 | WP_122356784.1 | AAA family ATPase | - |
| GMO17_RS27190 () | 112001..112354 | + | 354 | WP_024668964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|