MGE detailed information
MGE type: Genomic_island MGE length: 22202 bp
Accession: NZ_CP046416 Location: 3739041..3761242 Organism: Escherichia coli strain LZYWN_4 Replicon: chromosome
Accession: NZ_CP046416 Location: 3739041..3761242 Organism: Escherichia coli strain LZYWN_4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV83_RS18215 () | 3734156..3734938 | + | 783 | WP_001260503.1 | flagellar biosynthetic protein FliR | - |
| GJV83_RS18220 () | 3734928..3736067 | + | 1140 | WP_000785661.1 | flagellar type III secretion system protein FlhB | - |
| GJV83_RS18225 () | 3736051..3738144 | + | 2094 | WP_001140826.1 | flagellar biosynthesis protein FlhA | - |
| GJV83_RS18230 () | 3738368..3738865 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| GJV83_RS18235 () | 3739041..3739790 | - | 750 | WP_000056849.1 | C40 family peptidase | - |
| GJV83_RS18240 () | 3740000..3740260 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| GJV83_RS18245 () | 3740263..3740541 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| GJV83_RS18250 () | 3740697..3741437 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| GJV83_RS18255 () | 3741408..3742175 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| GJV83_RS18260 () | 3742381..3742959 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| GJV83_RS18265 () | 3743199..3745643 | + | 2445 | WP_000973083.1 | acyl-CoA dehydrogenase FadE | - |
| GJV83_RS18270 () | 3745686..3746132 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| GJV83_RS18275 () | 3746313..3747083 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| GJV83_RS18280 () | 3747124..3748260 | - | 1137 | WP_000420818.1 | ISAs1 family transposase | - |
| GJV83_RS18285 () | 3748691..3749083 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| GJV83_RS18290 () | 3749061..3753293 | - | 4233 | WP_061093173.1 | RHS domain-containing protein | - |
| GJV83_RS18295 () | 3753370..3753819 | - | 450 | WP_001372445.1 | hypothetical protein | - |
| GJV83_RS18300 () | 3753890..3754633 | - | 744 | Protein_3583 | ISAs1 family transposase | - |
| GJV83_RS18305 () | 3754631..3755156 | + | 526 | Protein_3584 | hypothetical protein | - |
| GJV83_RS18310 () | 3755083..3755565 | + | 483 | WP_001284199.1 | Hcp family type VI secretion system effector | - |
| GJV83_RS18315 () | 3755609..3756523 | + | 915 | WP_000908069.1 | hypothetical protein | - |
| GJV83_RS18320 () | 3756533..3757012 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| GJV83_RS18325 () | 3757149..3757934 | - | 786 | WP_001086141.1 | lipoprotein | - |
| GJV83_RS18335 () | 3758471..3759202 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| GJV83_RS18340 () | 3759267..3759734 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| GJV83_RS18345 () | 3759731..3760453 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| GJV83_RS18350 () | 3760487..3761242 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| GJV83_RS18355 () | 3761314..3762672 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| GJV83_RS18360 () | 3762720..3763316 | - | 597 | Protein_3594 | methyltransferase domain-containing protein | - |
| GJV83_RS18365 () | 3763347..3764147 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| GJV83_RS18370 () | 3764388..3765302 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| GJV83_RS18375 () | 3765299..3766102 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|