MGE detailed information
MGE type: Prophage MGE length: 57171 bp
Accession: NZ_CP046416 Location: 2326426..2383596 Organism: Escherichia coli strain LZYWN_4 Replicon: chromosome
Accession: NZ_CP046416 Location: 2326426..2383596 Organism: Escherichia coli strain LZYWN_4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV83_RS11370 () | 2321643..2323175 | + | 1533 | WP_001300486.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha | - |
| GJV83_RS11375 () | 2323186..2324574 | + | 1389 | WP_000014036.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | - |
| GJV83_RS11380 () | 2324599..2325633 | - | 1035 | WP_001118241.1 | AI-2 transporter TqsA | - |
| GJV83_RS11385 () | 2326045..2326392 | + | 348 | WP_206970407.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| GJV83_RS11390 () | 2326426..2327123 | + | 698 | Protein_2229 | IS1 family transposase | - |
| GJV83_RS11395 () | 2327172..2327501 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| GJV83_RS11400 () | 2327540..2328361 | - | 822 | WP_001260865.1 | serine protease | - |
| GJV83_RS11405 () | 2328461..2328544 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| GJV83_RS11410 () | 2328637..2328945 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| GJV83_RS11415 () | 2329369..2330622 | - | 1254 | WP_206970409.1 | MFS transporter | - |
| GJV83_RS11420 () | 2330729..2331622 | + | 894 | WP_001019525.1 | LysR family transcriptional regulator | - |
| GJV83_RS11425 () | 2331757..2332977 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| GJV83_RS11430 () | 2333102..2333797 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| GJV83_RS11435 () | 2333750..2335042 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| GJV83_RS11440 () | 2335201..2335815 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| GJV83_RS11445 () | 2335858..2336712 | - | 855 | WP_094322617.1 | dimethyl sulfoxide reductase anchor subunit | - |
| GJV83_RS11450 () | 2336714..2337331 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| GJV83_RS11455 () | 2337342..2339765 | - | 2424 | WP_094322623.1 | dimethyl sulfoxide reductase subunit A | - |
| GJV83_RS11460 () | 2339826..2342234 | - | 2409 | WP_206970411.1 | molybdopterin-dependent oxidoreductase | - |
| GJV83_RS11465 () | 2342260..2342957 | - | 698 | Protein_2244 | IS1 family transposase | - |
| GJV83_RS11470 () | 2343228..2343533 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| GJV83_RS11475 () | 2343641..2344351 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| GJV83_RS11480 () | 2344354..2344914 | - | 561 | WP_001138582.1 | spermidine N1-acetyltransferase | - |
| GJV83_RS11485 () | 2344949..2345290 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| GJV83_RS11490 () | 2345425..2345751 | + | 327 | WP_001469615.1 | YnfA family protein | - |
| GJV83_RS11495 () | 2345957..2347171 | + | 1215 | WP_094322620.1 | starvation-sensing protein RspA | - |
| GJV83_RS11500 () | 2347183..2348202 | + | 1020 | WP_038988672.1 | Zn-dependent oxidoreductase | - |
| GJV83_RS11505 () | 2348260..2348370 | + | 111 | WP_021531328.1 | hypothetical protein | - |
| GJV83_RS11510 () | 2348390..2349670 | - | 1281 | WP_000876979.1 | site-specific integrase | - |
| GJV83_RS11515 () | 2349705..2349956 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| GJV83_RS11520 () | 2350029..2350373 | - | 345 | WP_001487236.1 | 3'-5' exoribonuclease | - |
| GJV83_RS11525 () | 2350441..2351138 | + | 698 | Protein_2256 | IS1-like element IS1A family transposase | - |
| GJV83_RS11530 () | 2351326..2351658 | - | 333 | WP_001301033.1 | protein FlxA | - |
| GJV83_RS11535 () | 2351861..2352166 | - | 306 | WP_071593935.1 | hypothetical protein | - |
| GJV83_RS11540 () | 2352191..2352430 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| GJV83_RS11545 () | 2352430..2352717 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| GJV83_RS11550 () | 2352789..2352944 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| GJV83_RS11555 () | 2353161..2353412 | + | 252 | WP_001463433.1 | hypothetical protein | - |
| GJV83_RS11560 () | 2353479..2353757 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| GJV83_RS11565 () | 2353759..2354808 | + | 1050 | WP_001515372.1 | DUF968 domain-containing protein | - |
| GJV83_RS11570 () | 2354826..2355203 | + | 378 | WP_206970412.1 | antitermination protein | - |
| GJV83_RS11575 () | 2355359..2355883 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| GJV83_RS11580 () | 2356076..2357035 | + | 960 | WP_206970413.1 | DUF1722 domain-containing protein | - |
| GJV83_RS11585 () | 2357351..2358462 | - | 1112 | Protein_2268 | IS3 family transposase | - |
| GJV83_RS11590 () | 2358528..2359690 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| GJV83_RS11595 () | 2359718..2359903 | + | 186 | Protein_2270 | DUF2514 family protein | - |
| GJV83_RS11600 () | 2360266..2360478 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| GJV83_RS11605 () | 2360489..2360677 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| GJV83_RS11610 () | 2360680..2360745 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| GJV83_RS11615 () | 2360886..2362114 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| GJV83_RS11620 () | 2362160..2362315 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| GJV83_RS11625 () | 2362487..2362660 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| GJV83_RS11630 () | 2362812..2363222 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| GJV83_RS11635 () | 2363280..2363513 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| GJV83_RS11640 () | 2363902..2364447 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| GJV83_RS11645 () | 2364422..2366347 | + | 1926 | WP_094322472.1 | phage terminase large subunit family protein | - |
| GJV83_RS11650 () | 2366344..2366550 | + | 207 | WP_000198149.1 | gpW family protein | - |
| GJV83_RS11655 () | 2366547..2366978 | + | 432 | Protein_2282 | phage portal protein | - |
| GJV83_RS11660 () | 2366970..2367881 | + | 912 | WP_172440531.1 | phage tail protein | - |
| GJV83_RS11665 () | 2367881..2368456 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| GJV83_RS11670 () | 2368554..2369144 | - | 591 | WP_000086527.1 | recombinase family protein | - |
| GJV83_RS11675 () | 2369461..2369694 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| GJV83_RS11680 () | 2369763..2369876 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| GJV83_RS11685 () | 2370481..2371764 | + | 1284 | Protein_2288 | MHS family MFS transporter YdfJ | - |
| GJV83_RS11690 () | 2371853..2373313 | + | 1461 | Protein_2289 | mannitol dehydrogenase family protein | - |
| GJV83_RS11695 () | 2373349..2373552 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| GJV83_RS11700 () | 2373729..2374415 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| GJV83_RS11705 () | 2374504..2375250 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| GJV83_RS11710 () | 2375387..2377432 | + | 2046 | WP_094322483.1 | peptidyl-dipeptidase Dcp | - |
| GJV83_RS11715 () | 2377477..2377995 | - | 519 | WP_094322477.1 | 2-oxo-tetronate isomerase | - |
| GJV83_RS11720 () | 2378271..2378663 | + | 393 | WP_000671736.1 | YdeI family stress tolerance OB fold protein | - |
| GJV83_RS11725 () | 2378918..2379808 | + | 891 | WP_089586429.1 | diguanylate cyclase DgcZ | - |
| GJV83_RS11730 () | 2380027..2380122 | - | 96 | WP_000901367.1 | protein MgtS | - |
| GJV83_RS11735 () | 2380249..2381277 | - | 1029 | Protein_2298 | efflux MFS transporter YdeE | - |
| GJV83_RS11740 () | 2381314..2382282 | - | 969 | WP_000654812.1 | IS5-like element IS903B family transposase | - |
| GJV83_RS11745 () | 2382317..2382502 | - | 186 | Protein_2300 | efflux MFS transporter YdeE | - |
| GJV83_RS11750 () | 2382697..2383596 | + | 900 | WP_094322479.1 | O-acetylserine/cysteine exporter | - |
| GJV83_RS11755 () | 2383641..2384339 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| GJV83_RS11760 () | 2384538..2384849 | + | 312 | WP_001613092.1 | PTS sugar transporter subunit IIB | - |
| GJV83_RS11765 () | 2384963..2386285 | + | 1323 | WP_182116909.1 | PTS sugar transporter subunit IIC | - |
| GJV83_RS11770 () | 2386313..2386624 | + | 312 | WP_094322481.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| GJV83_RS11775 () | 2386680..2388353 | + | 1674 | WP_094322482.1 | carbohydrate porin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|