MGE detailed information
MGE type: Genomic_island MGE length: 47622 bp
Accession: NZ_CP046411 Location: 2263153..2310774 Organism: Vibrio parahaemolyticus strain 19-021-D1 Replicon: chromosome
Accession: NZ_CP046411 Location: 2263153..2310774 Organism: Vibrio parahaemolyticus strain 19-021-D1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GNY17_RS11580 () | 2258604..2259731 | - | 1128 | WP_025793165.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| GNY17_RS11585 () | 2259736..2260221 | - | 486 | WP_005394016.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| GNY17_RS11590 () | 2260421..2260978 | + | 558 | WP_005461456.1 | threonylcarbamoyl-AMP synthase | - |
| GNY17_RS11595 () | 2261026..2261943 | + | 918 | WP_024699626.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| GNY17_RS11600 () | 2262045..2262878 | + | 834 | WP_015297507.1 | shikimate dehydrogenase | - |
| GNY17_RS11605 () | 2262882..2263145 | + | 264 | WP_005497408.1 | DUF1488 domain-containing protein | - |
| GNY17_RS11610 () | 2263153..2263701 | - | 549 | WP_024699628.1 | Protein YrdA | VF |
| GNY17_RS11655 () | 2269759..2271102 | + | 1344 | WP_156216666.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GNY17_RS11660 () | 2271095..2271478 | + | 384 | WP_156216668.1 | hypothetical protein | - |
| GNY17_RS11665 () | 2271488..2271676 | + | 189 | WP_000342585.1 | hypothetical protein | - |
| GNY17_RS11670 () | 2271938..2272342 | + | 405 | WP_000127617.1 | hypothetical protein | Antitoxin Detail |
| GNY17_RS11675 () | 2272345..2273286 | + | 942 | WP_156216669.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| GNY17_RS11680 () | 2273295..2273861 | + | 567 | Protein_2151 | SAM-dependent DNA methyltransferase | - |
| GNY17_RS11685 () | 2273933..2274208 | - | 276 | WP_156216623.1 | hypothetical protein | - |
| GNY17_RS11690 () | 2274512..2274724 | + | 213 | WP_033929743.1 | helix-turn-helix domain-containing protein | - |
| GNY17_RS11695 () | 2274763..2275875 | - | 1113 | WP_156216625.1 | hypothetical protein | - |
| GNY17_RS11700 () | 2275875..2276471 | - | 597 | WP_107111805.1 | pancortin-3 | - |
| GNY17_RS11705 () | 2276497..2277213 | - | 717 | WP_196952916.1 | M48 family metallopeptidase | - |
| GNY17_RS11710 () | 2277261..2280542 | - | 3282 | WP_156216629.1 | type I restriction endonuclease subunit R | - |
| GNY17_RS11715 () | 2280586..2283153 | - | 2568 | WP_156216631.1 | AAA family ATPase | - |
| GNY17_RS11720 () | 2283167..2284384 | - | 1218 | WP_156216633.1 | restriction endonuclease subunit S | - |
| GNY17_RS11725 () | 2284374..2285897 | - | 1524 | WP_156216634.1 | type I restriction-modification system subunit M | - |
| GNY17_RS11730 () | 2285970..2286557 | - | 588 | WP_156216636.1 | restriction endonuclease subunit S | - |
| GNY17_RS11735 () | 2286700..2288085 | + | 1386 | WP_156216638.1 | IS91 family transposase ISTha3 | Transposase |
| GNY17_RS11740 () | 2288075..2290684 | + | 2610 | WP_156216640.1 | hypothetical protein | - |
| GNY17_RS11745 () | 2290681..2292681 | + | 2001 | WP_156216642.1 | hypothetical protein ; Integrase | Integrase |
| GNY17_RS11750 () | 2292678..2293061 | + | 384 | WP_156216644.1 | hypothetical protein | - |
| GNY17_RS11755 () | 2293251..2295269 | + | 2019 | Protein_2166 | N-6 DNA methylase | - |
| GNY17_RS11760 () | 2295262..2296542 | + | 1281 | WP_052143261.1 | restriction endonuclease subunit S | - |
| GNY17_RS11765 () | 2296660..2299776 | + | 3117 | WP_156216671.1 | HsdR family type I site-specific deoxyribonuclease | - |
| GNY17_RS11770 () | 2299905..2300198 | - | 294 | WP_033931510.1 | hypothetical protein | - |
| GNY17_RS11775 () | 2300366..2300695 | - | 330 | WP_156216673.1 | hypothetical protein | - |
| GNY17_RS11780 () | 2301211..2301450 | + | 240 | WP_001084862.1 | helix-turn-helix domain-containing protein | - |
| GNY17_RS11785 () | 2301759..2302859 | + | 1101 | WP_033931513.1 | Tn3 family transposase TnpR_ISNpu13 | Transposase |
| GNY17_RS11790 () | 2302957..2304474 | + | 1518 | WP_156216674.1 | hypothetical protein | - |
| GNY17_RS11795 () | 2304545..2305561 | + | 1017 | WP_196952895.1 | hypothetical protein | - |
| GNY17_RS11800 () | 2305606..2306133 | + | 528 | WP_033931516.1 | hypothetical protein | - |
| GNY17_RS11805 () | 2306536..2307660 | + | 1125 | WP_102589961.1 | hypothetical protein | - |
| GNY17_RS11810 () | 2307657..2308073 | + | 417 | WP_033931519.1 | hypothetical protein | - |
| GNY17_RS11815 () | 2308070..2308825 | + | 756 | WP_052143263.1 | hypothetical protein | - |
| GNY17_RS11820 () | 2308889..2309140 | - | 252 | WP_031854775.1 | helix-turn-helix domain-containing protein | - |
| GNY17_RS11825 () | 2310391..2310774 | + | 384 | WP_005497358.1 | fluoride efflux transporter CrcB | - |
| GNY17_RS11830 () | 2311103..2313043 | + | 1941 | WP_025548309.1 | phosphomethylpyrimidine synthase ThiC | - |
| GNY17_RS11835 () | 2313043..2314377 | + | 1335 | WP_025793393.1 | thiamine phosphate synthase | - |
| GNY17_RS11840 () | 2314367..2315149 | + | 783 | WP_025793394.1 | thiazole biosynthesis adenylyltransferase ThiF | - |
| GNY17_RS11845 () | 2315229..2315432 | + | 204 | WP_005497365.1 | sulfur carrier protein ThiS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|