MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 91471 bp
Accession: NZ_CP046403 Location: 5864317..5955787 Organism: Pseudomonas aeruginosa strain SE5369 Replicon: chromosome
Accession: NZ_CP046403 Location: 5864317..5955787 Organism: Pseudomonas aeruginosa strain SE5369 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GNT46_RS27660 () | 5859889..5864088 | + | 4200 | WP_023083207.1 | two-partner secretion system exoprotein TpsA4 | - |
| GNT46_RS27670 () | 5864454..5865320 | + | 867 | WP_003111785.1 | ParA family protein | - |
| GNT46_RS27675 () | 5865322..5866059 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| GNT46_RS27680 () | 5866056..5866553 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| GNT46_RS27685 () | 5866559..5867011 | + | 453 | Protein_5477 | hypothetical protein | - |
| GNT46_RS27690 () | 5867072..5867701 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| GNT46_RS27695 () | 5867701..5868402 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| GNT46_RS27700 () | 5868399..5869106 | + | 708 | WP_023083211.1 | HNH endonuclease | - |
| GNT46_RS27705 () | 5869090..5869314 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| GNT46_RS27710 () | 5869311..5870654 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| GNT46_RS27715 () | 5871093..5871539 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| GNT46_RS27720 () | 5871717..5871902 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| GNT46_RS27725 () | 5871892..5872419 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| GNT46_RS27730 () | 5872416..5872673 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| GNT46_RS27735 () | 5872666..5872908 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| GNT46_RS27740 () | 5872901..5873134 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| GNT46_RS27745 () | 5873134..5874150 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| GNT46_RS27750 () | 5874153..5874407 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| GNT46_RS27755 () | 5874404..5876140 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| GNT46_RS27760 () | 5876168..5876935 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| GNT46_RS27765 () | 5876932..5878203 | + | 1272 | WP_023083217.1 | hypothetical protein | - |
| GNT46_RS27770 () | 5878800..5878997 | + | 198 | WP_019396765.1 | hypothetical protein | - |
| GNT46_RS27775 () | 5879154..5879882 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| GNT46_RS27780 () | 5879888..5880436 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| GNT46_RS27785 () | 5880483..5881322 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| GNT46_RS27790 () | 5881352..5881840 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| GNT46_RS27795 () | 5881996..5882163 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| GNT46_RS27800 () | 5882229..5882447 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| GNT46_RS27805 () | 5882461..5882658 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| GNT46_RS27810 () | 5882674..5883084 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| GNT46_RS27815 () | 5883084..5883314 | - | 231 | WP_031634724.1 | antitoxin | Antitoxin Detail |
| GNT46_RS27820 () | 5883570..5885489 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| GNT46_RS27825 () | 5885797..5886006 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| GNT46_RS27830 () | 5886227..5888116 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| GNT46_RS27835 () | 5888113..5890086 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| GNT46_RS27840 () | 5890208..5890990 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| GNT46_RS27845 () | 5891023..5892276 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| GNT46_RS27850 () | 5892450..5893574 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| GNT46_RS27855 () | 5893574..5895283 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| GNT46_RS27860 () | 5895287..5896612 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| GNT46_RS27865 () | 5896602..5897135 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| GNT46_RS27870 () | 5897144..5898724 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| GNT46_RS27875 () | 5898724..5899803 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| GNT46_RS27880 () | 5899825..5900355 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| GNT46_RS27885 () | 5900352..5901293 | + | 942 | WP_004352826.1 | Flp pilus assembly complex ATPase component TadA | - |
| GNT46_RS27890 () | 5901298..5902626 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| GNT46_RS27895 () | 5902655..5903092 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| GNT46_RS27900 () | 5904158..5904403 | + | 246 | WP_003123340.1 | hypothetical protein | - |
| GNT46_RS27905 () | 5904478..5904654 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| GNT46_RS27910 () | 5905115..5905594 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| GNT46_RS27915 () | 5905732..5905890 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| GNT46_RS27920 () | 5905964..5906161 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| GNT46_RS27925 () | 5906646..5907353 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| GNT46_RS27930 () | 5907589..5907939 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| GNT46_RS27935 () | 5907996..5908787 | + | 792 | WP_003123344.1 | DUF3275 family protein | - |
| GNT46_RS27940 () | 5908890..5909252 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| GNT46_RS27945 () | 5909320..5909574 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| GNT46_RS27950 () | 5909667..5910272 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| GNT46_RS27955 () | 5910302..5911747 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| GNT46_RS27960 () | 5911852..5914101 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| GNT46_RS27965 () | 5914126..5914509 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| GNT46_RS27970 () | 5914715..5915008 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| GNT46_RS27975 () | 5915005..5915871 | + | 867 | WP_004352797.1 | IS3 family transposase ISAeca4 | Transposase |
| GNT46_RS27980 () | 5916131..5916823 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| GNT46_RS27985 () | 5916834..5917589 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| GNT46_RS27990 () | 5917574..5918155 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| GNT46_RS27995 () | 5918152..5918652 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| GNT46_RS28000 () | 5918724..5918930 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| GNT46_RS28005 () | 5918934..5921165 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| GNT46_RS28010 () | 5921165..5921911 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| GNT46_RS28015 () | 5921929..5922420 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| GNT46_RS28020 () | 5922661..5924142 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| GNT46_RS28025 () | 5924274..5925383 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| GNT46_RS28030 () | 5925428..5925739 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| GNT46_RS28035 () | 5925912..5926211 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| GNT46_RS28040 () | 5926304..5926642 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| GNT46_RS28045 () | 5926639..5926878 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| GNT46_RS28050 () | 5926896..5927252 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| GNT46_RS28055 () | 5927263..5927649 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| GNT46_RS28060 () | 5927646..5928305 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| GNT46_RS28065 () | 5928302..5929186 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| GNT46_RS28070 () | 5929170..5930675 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| GNT46_RS28075 () | 5930653..5931096 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| GNT46_RS28080 () | 5931096..5934038 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| GNT46_RS28085 () | 5934035..5934319 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| GNT46_RS28090 () | 5934316..5934975 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| GNT46_RS28095 () | 5934972..5935190 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| GNT46_RS28100 () | 5937331..5937762 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| GNT46_RS28105 () | 5937762..5938700 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| GNT46_RS28110 () | 5938718..5940100 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| GNT46_RS28115 () | 5940100..5940447 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| GNT46_RS28120 () | 5940444..5941958 | + | 1515 | WP_179071140.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GNT46_RS28125 () | 5942126..5942353 | - | 228 | Protein_5565 | hypothetical protein | - |
| GNT46_RS28130 () | 5942472..5942744 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GNT46_RS28135 () | 5942748..5943098 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GNT46_RS28140 () | 5943509..5945968 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| GNT46_RS28145 () | 5946256..5947983 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| GNT46_RS28150 () | 5947994..5949007 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| GNT46_RS28155 () | 5949549..5949863 | + | 315 | Protein_5571 | TraI domain-containing protein | - |
| GNT46_RS28160 () | 5949987..5950742 | - | 756 | WP_003290589.1 | IS21 family transposase ISUnCu3 | Transposase |
| GNT46_RS28165 () | 5950760..5952274 | - | 1515 | WP_019364253.1 | IS21 family transposase IS1491 | Transposase |
| GNT46_RS28170 () | 5952476..5954095 | + | 1620 | Protein_5574 | TraI domain-containing protein | - |
| GNT46_RS28175 () | 5954092..5955372 | + | 1281 | WP_023083793.1 | hypothetical protein ; Integrase | Integrase |
| GNT46_RS28195 () | 5956225..5958789 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| GNT46_RS28200 () | 5958945..5959673 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| GNT46_RS28205 () | 5959670..5960632 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|