MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73454 bp
Accession: NZ_CP046396 Location: 850696..924149 Organism: Escherichia coli strain ampC_0069 Replicon: chromosome
Accession: NZ_CP046396 Location: 850696..924149 Organism: Escherichia coli strain ampC_0069 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GNX12_RS03960 () | 847296..848444 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| GNX12_RS03965 () | 848516..849499 | - | 984 | WP_024946586.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| GNX12_RS03970 () | 850310..850465 | - | 156 | WP_000729638.1 | hypothetical protein | - |
| GNX12_RS03975 () | 850823..851392 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| GNX12_RS03980 () | 851489..851686 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| GNX12_RS03985 () | 851698..852186 | - | 489 | WP_000777545.1 | hypothetical protein | - |
| GNX12_RS03990 () | 852183..852557 | - | 375 | WP_032333762.1 | TA system toxin CbtA family protein | Toxin Detail |
| GNX12_RS03995 () | 852647..853015 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GNX12_RS04000 () | 853178..853399 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| GNX12_RS04005 () | 853462..853938 | - | 477 | WP_001186786.1 | RadC family protein | - |
| GNX12_RS04010 () | 853954..854439 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| GNX12_RS04015 () | 854530..855348 | - | 819 | WP_001773857.1 | DUF945 domain-containing protein | - |
| GNX12_RS04020 () | 855438..855671 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| GNX12_RS04025 () | 855677..856354 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| GNX12_RS04030 () | 856502..857182 | - | 681 | WP_032333197.1 | WYL domain-containing protein | - |
| GNX12_RS04035 () | 857385..858269 | - | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| GNX12_RS04040 () | 858370..859594 | + | 1225 | Protein_794 | hypothetical protein | - |
| GNX12_RS04045 () | 860757..861287 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| GNX12_RS04050 () | 861957..862688 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| GNX12_RS04055 () | 863209..863661 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| GNX12_RS04060 () | 864197..865132 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| GNX12_RS04065 () | 865125..866060 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| GNX12_RS04070 () | 866144..867394 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| GNX12_RS04075 () | 867413..868507 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| GNX12_RS04080 () | 869808..870374 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| GNX12_RS04085 () | 870632..871207 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| GNX12_RS04090 () | 871276..871509 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| GNX12_RS04095 () | 871521..871746 | + | 226 | Protein_805 | hypothetical protein | - |
| GNX12_RS04100 () | 871808..872074 | - | 267 | Protein_806 | IS3 family transposase IS2 | Transposase |
| GNX12_RS04105 () | 872165..873322 | + | 1158 | Protein_807 | Multidrug resistance protein MexB | VF |
| GNX12_RS04110 () | 873443..874093 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| GNX12_RS04115 () | 874116..874409 | + | 294 | Protein_809 | helix-turn-helix domain-containing protein | - |
| GNX12_RS04120 () | 874766..875311 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| GNX12_RS04125 () | 875356..876507 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| GNX12_RS04130 () | 876636..877691 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| GNX12_RS04135 () | 877708..878937 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| GNX12_RS04140 () | 879586..880107 | - | 522 | WP_000237741.1 | maturase | - |
| GNX12_RS04145 () | 880135..880674 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| GNX12_RS04150 () | 881160..882065 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| GNX12_RS04155 () | 882202..883119 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| GNX12_RS04160 () | 883228..885780 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| GNX12_RS04165 () | 885829..886404 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| GNX12_RS04170 () | 886415..886714 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| GNX12_RS04175 () | 886738..888255 | - | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| GNX12_RS04180 () | 888316..889101 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| GNX12_RS04185 () | 889123..889404 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| GNX12_RS04190 () | 889689..890885 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| GNX12_RS04195 () | 890914..891411 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| GNX12_RS04200 () | 891439..891708 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| GNX12_RS04205 () | 891720..892424 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| GNX12_RS04210 () | 892429..893187 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| GNX12_RS04215 () | 893242..893928 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| GNX12_RS04220 () | 894068..895186 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| GNX12_RS04225 () | 895543..896043 | + | 501 | Protein_831 | DNA-binding protein | - |
| GNX12_RS04230 () | 896139..896372 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| GNX12_RS04235 () | 896425..896616 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| GNX12_RS04240 () | 897337..897597 | + | 261 | Protein_834 | IS3 family transposase ISLad1 | Transposase |
| GNX12_RS04245 () | 897740..899485 | + | 1746 | WP_001564039.1 | AAA family ATPase | - |
| GNX12_RS04250 () | 899879..900319 | + | 441 | WP_001403216.1 | hypothetical protein | VF |
| GNX12_RS04255 () | 900360..901226 | + | 867 | Protein_837 | ImpA domain protein | - |
| GNX12_RS04260 () | 901343..901987 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| GNX12_RS04265 () | 902128..903360 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| GNX12_RS04270 () | 903345..903983 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| GNX12_RS04275 () | 904062..904331 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| GNX12_RS04280 () | 904352..904996 | + | 645 | WP_001564034.1 | hypothetical protein | - |
| GNX12_RS04285 () | 905061..905384 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| GNX12_RS04290 () | 905432..906223 | - | 792 | Protein_844 | ATP-dependent helicase | - |
| GNX12_RS04295 () | 906218..906607 | + | 390 | Protein_845 | IS3 family transposase | - |
| GNX12_RS04300 () | 907280..908788 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| GNX12_RS04305 () | 908878..909351 | + | 474 | Protein_847 | IS3 family transposase IS629 | Transposase |
| GNX12_RS04310 () | 909549..909806 | - | 258 | Protein_848 | IS3 family transposase IS911 | Transposase |
| GNX12_RS04315 () | 909876..910223 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| GNX12_RS04320 () | 910842..911535 | - | 694 | Protein_850 | IS1 family transposase | - |
| GNX12_RS04325 () | 911788..913257 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| GNX12_RS04330 () | 913362..915731 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| GNX12_RS04335 () | 915806..917305 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| GNX12_RS04340 () | 917448..918145 | + | 698 | Protein_854 | IS1 family transposase IS1S | Transposase |
| GNX12_RS04345 () | 918612..919163 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| GNX12_RS04350 () | 919330..920121 | - | 792 | Protein_856 | IS3 family transposase | - |
| GNX12_RS04355 () | 920138..920835 | - | 698 | Protein_857 | IS1 family transposase IS1A | Transposase |
| GNX12_RS04360 () | 921365..922408 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| GNX12_RS04365 () | 922664..923929 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| GNX12_RS04375 () | 924308..925015 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| GNX12_RS04380 () | 925407..927542 | + | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| GNX12_RS04385 () | 927591..928847 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|