MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 107014 bp
Accession: NZ_CP046379 Location: 925847..1032860 Organism: Streptococcus pneumoniae strain 563 Replicon: chromosome
Accession: NZ_CP046379 Location: 925847..1032860 Organism: Streptococcus pneumoniae strain 563 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GL187_RS04695 () | 920857..921486 | + | 630 | WP_000049036.1 | hypothetical protein | - |
| GL187_RS04700 () | 921522..922745 | - | 1224 | WP_000222032.1 | peptidase T | - |
| GL187_RS04705 () | 922900..923994 | + | 1095 | WP_000709247.1 | ferrochelatase | - |
| GL187_RS04710 () | 924036..924413 | - | 378 | WP_000916795.1 | large conductance mechanosensitive channel protein MscL | - |
| GL187_RS04715 () | 924495..924926 | - | 432 | WP_000742997.1 | GtrA family protein | - |
| GL187_RS04720 () | 925049..925558 | + | 510 | WP_000737071.1 | QueT transporter family protein | - |
| GL187_RS04730 () | 926316..927392 | + | 1077 | WP_000542473.1 | aspartate-semialdehyde dehydrogenase | - |
| GL187_RS04735 () | 927448..928383 | + | 936 | WP_000121618.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| GL187_RS04740 () | 928430..929803 | - | 1374 | WP_000632758.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| GL187_RS04745 () | 929939..930121 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
| GL187_RS04750 () | 930244..930834 | + | 591 | WP_000068149.1 | thymidine kinase | - |
| GL187_RS04755 () | 930831..931910 | + | 1080 | WP_001028796.1 | peptide chain release factor 1 | - |
| GL187_RS04760 () | 931910..932749 | + | 840 | WP_000761902.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| GL187_RS04765 () | 932733..933335 | + | 603 | WP_000969271.1 | threonylcarbamoyl-AMP synthase | - |
| GL187_RS04770 () | 933337..933768 | + | 432 | WP_000942941.1 | GNAT family N-acetyltransferase | - |
| GL187_RS04775 () | 933830..935086 | + | 1257 | WP_000575514.1 | serine hydroxymethyltransferase | - |
| GL187_RS04780 () | 935094..936068 | + | 975 | WP_000356089.1 | nucleoid-associated protein | - |
| GL187_RS04785 () | 936068..936682 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| GL187_RS04790 () | 936756..937730 | + | 975 | WP_001227756.1 | DUF1002 domain-containing protein | - |
| GL187_RS04795 () | 937804..939165 | + | 1362 | WP_024477702.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| GL187_RS04800 () | 939374..939547 | + | 174 | WP_016397890.1 | hypothetical protein | - |
| GL187_RS04805 () | 939544..940323 | + | 780 | WP_000822768.1 | replication initiator protein A | - |
| GL187_RS04810 () | 940422..941780 | + | 1359 | WP_001210976.1 | DNA (cytosine-5-)-methyltransferase | - |
| GL187_RS04815 () | 941764..942213 | + | 450 | WP_000645900.1 | hypothetical protein | - |
| GL187_RS04820 () | 942206..942586 | + | 381 | WP_000566528.1 | hypothetical protein | - |
| GL187_RS04825 () | 942599..942832 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| GL187_RS04830 () | 942835..943437 | + | 603 | WP_000821271.1 | CPBP family intramembrane metalloprotease | - |
| GL187_RS04835 () | 943599..944816 | - | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GL187_RS04840 () | 944898..945101 | - | 204 | WP_000814511.1 | excisionase | - |
| GL187_RS04845 () | 945562..945792 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| GL187_RS04850 () | 945789..946211 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| GL187_RS04855 () | 946716..947069 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| GL187_RS04860 () | 947129..947296 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| GL187_RS04865 () | 947415..949334 | - | 1920 | WP_002414694.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| GL187_RS04870 () | 949350..949466 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| GL187_RS04875 () | 949711..950646 | - | 936 | WP_001224320.1 | conjugal transfer protein | - |
| GL187_RS04880 () | 950643..951644 | - | 1002 | WP_000769868.1 | putative endopeptidase p60 | VF |
| GL187_RS04885 () | 951641..953818 | - | 2178 | WP_000804748.1 | membrane protein | - |
| GL187_RS04890 () | 953821..956268 | - | 2448 | WP_000331160.1 | ATP-binding protein | - |
| GL187_RS04895 () | 956252..956758 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| GL187_RS04900 () | 956733..957230 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| GL187_RS04905 () | 957347..957568 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| GL187_RS04910 () | 957748..958995 | + | 1248 | WP_000019067.1 | ISL3 family transposase IS1165 | Transposase |
| GL187_RS04915 () | 959252..959989 | - | 738 | WP_001038795.1 | rRNA adenine N-6-methyltransferase | ARG |
| GL187_RS04920 () | 960114..960197 | - | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| GL187_RS04925 () | 960246..961664 | - | 1419 | WP_001815707.1 | replication initiation factor domain-containing protein | - |
| GL187_RS04930 () | 961687..961839 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| GL187_RS04935 () | 961842..963227 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| GL187_RS04940 () | 963256..963642 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| GL187_RS04945 () | 963658..963972 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| GL187_RS04950 () | 964645..964944 | + | 300 | WP_000869760.1 | hypothetical protein | - |
| GL187_RS04955 () | 964934..965422 | + | 489 | WP_000093672.1 | hypothetical protein | - |
| GL187_RS04960 () | 965422..967299 | + | 1878 | WP_012677090.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GL187_RS04965 () | 967320..967562 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| GL187_RS04970 () | 967579..968433 | + | 855 | WP_001054259.1 | conjugal transfer protein TrbL | - |
| GL187_RS04975 () | 968487..968846 | + | 360 | WP_024477698.1 | PrgI family protein | - |
| GL187_RS04980 () | 968797..971154 | + | 2358 | WP_000824169.1 | hypothetical protein | - |
| GL187_RS04985 () | 971166..973979 | + | 2814 | WP_024477696.1 | CHAP domain-containing protein | - |
| GL187_RS04990 () | 974014..974622 | - | 609 | WP_024477695.1 | hypothetical protein | - |
| GL187_RS04995 () | 974624..974788 | - | 165 | WP_000201399.1 | hypothetical protein | - |
| GL187_RS05000 () | 975357..976217 | + | 861 | WP_024477693.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| GL187_RS05005 () | 976590..977720 | + | 1131 | WP_050220326.1 | ThiF family adenylyltransferase | - |
| GL187_RS05010 () | 977713..978921 | + | 1209 | WP_024477691.1 | radical SAM protein | - |
| GL187_RS05015 () | 978918..979862 | + | 945 | WP_024477690.1 | radical SAM protein | - |
| GL187_RS05020 () | 979859..980167 | + | 309 | WP_024477689.1 | hypothetical protein | - |
| GL187_RS05025 () | 980157..981422 | + | 1266 | WP_024477688.1 | MFS transporter | - |
| GL187_RS05030 () | 981638..981780 | + | 143 | Protein_990 | ABC transporter ATP-binding protein | - |
| GL187_RS05035 () | 981979..982389 | + | 411 | WP_000387511.1 | thrombospondin type 3 repeat-containing protein | - |
| GL187_RS05040 () | 982437..988661 | + | 6225 | WP_024477687.1 | DEAD/DEAH box helicase family protein | - |
| GL187_RS05045 () | 988736..989020 | + | 285 | WP_024477686.1 | hypothetical protein | - |
| GL187_RS05050 () | 989034..989354 | + | 321 | WP_024477685.1 | hypothetical protein | - |
| GL187_RS05055 () | 990065..991102 | + | 1038 | WP_024477684.1 | hypothetical protein | - |
| GL187_RS05060 () | 991147..991545 | + | 399 | WP_000351508.1 | hypothetical protein | - |
| GL187_RS05065 () | 991881..992762 | + | 882 | WP_024477683.1 | GIY-YIG nuclease family protein | - |
| GL187_RS05070 () | 993087..994040 | - | 954 | WP_001155339.1 | IS30 family transposase ISSpn8 | Transposase |
| GL187_RS05075 () | 994412..995050 | + | 639 | WP_024477682.1 | hypothetical protein | - |
| GL187_RS05080 () | 995060..996145 | + | 1086 | WP_024477681.1 | toprim domain-containing protein | - |
| GL187_RS05085 () | 996196..996429 | + | 234 | WP_024477680.1 | hypothetical protein | - |
| GL187_RS05090 () | 996426..996809 | + | 384 | WP_002933294.1 | hypothetical protein | - |
| GL187_RS05095 () | 996847..997110 | + | 264 | Protein_1003 | hypothetical protein | - |
| GL187_RS05100 () | 997184..997660 | + | 477 | WP_000579599.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| GL187_RS05105 () | 997660..998427 | + | 768 | WP_050210402.1 | zeta toxin family protein | Toxin Detail |
| GL187_RS05110 () | 998462..1000081 | + | 1620 | WP_078133416.1 | DUF4297 domain-containing protein | - |
| GL187_RS05115 () | 1000068..1000607 | + | 540 | WP_024477676.1 | hypothetical protein | - |
| GL187_RS05120 () | 1000597..1003236 | + | 2640 | WP_078133417.1 | SMC family ATPase | - |
| GL187_RS05125 () | 1003607..1003963 | + | 357 | WP_024477674.1 | hypothetical protein | - |
| GL187_RS05130 () | 1003968..1004333 | + | 366 | WP_024477673.1 | plasmid mobilization relaxosome protein MobC | - |
| GL187_RS05135 () | 1004320..1006149 | + | 1830 | WP_197097725.1 | relaxase/mobilization nuclease domain-containing protein | - |
| GL187_RS05140 () | 1006270..1006494 | + | 225 | WP_024477671.1 | helix-turn-helix domain-containing protein | - |
| GL187_RS05145 () | 1006630..1006770 | + | 141 | WP_153277697.1 | hypothetical protein | - |
| GL187_RS05150 () | 1006952..1008739 | + | 1788 | WP_024477670.1 | hypothetical protein ; Integrase | Integrase |
| GL187_RS05155 () | 1008660..1009007 | + | 348 | WP_197097724.1 | 23S rRNA methyltransferase | - |
| GL187_RS05160 () | 1009221..1009454 | + | 234 | WP_000710805.1 | hypothetical protein | - |
| GL187_RS05165 () | 1009745..1009962 | + | 218 | Protein_1017 | helix-turn-helix transcriptional regulator | - |
| GL187_RS05170 () | 1010355..1011380 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| GL187_RS05175 () | 1011370..1012377 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| GL187_RS05180 () | 1012377..1013384 | + | 1008 | WP_024477669.1 | putative siderophore transport system permease protein YfhA | VF |
| GL187_RS05185 () | 1013384..1014178 | + | 795 | WP_000677520.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| GL187_RS05190 () | 1014566..1014991 | + | 426 | WP_075270856.1 | restriction endonuclease subunit S | - |
| GL187_RS05195 () | 1015047..1015364 | + | 318 | WP_000968321.1 | DUF3847 domain-containing protein | - |
| GL187_RS05200 () | 1015678..1017066 | + | 1389 | WP_197097723.1 | MobA/MobL family protein | - |
| GL187_RS05205 () | 1017392..1017565 | + | 174 | WP_001042635.1 | hypothetical protein | - |
| GL187_RS05210 () | 1017751..1018293 | + | 543 | WP_197097722.1 | PcfB family protein | - |
| GL187_RS05215 () | 1018746..1019699 | + | 954 | WP_001155339.1 | IS30 family transposase ISSpn8 | Transposase |
| GL187_RS05220 () | 1019714..1020394 | + | 681 | WP_000502597.1 | phage replisome organizer N-terminal domain-containing protein | - |
| GL187_RS05225 () | 1021078..1021239 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| GL187_RS05230 () | 1021331..1023010 | + | 1680 | WP_000031842.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| GL187_RS05235 () | 1023278..1023844 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| GL187_RS05240 () | 1024165..1024353 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| GL187_RS05245 () | 1024415..1025173 | + | 759 | WP_000262011.1 | ATP-grasp domain-containing protein | - |
| GL187_RS05250 () | 1025231..1026085 | + | 855 | WP_024477726.1 | ADP-ribosylglycohydrolase family protein | - |
| GL187_RS05255 () | 1026197..1027081 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| GL187_RS05260 () | 1027244..1028983 | + | 1740 | WP_000423466.1 | glycoside hydrolase family 13 protein | - |
| GL187_RS05265 () | 1029258..1029713 | + | 456 | WP_000500465.1 | hypothetical protein | - |
| GL187_RS05270 () | 1030158..1030634 | + | 477 | WP_000579599.1 | helix-turn-helix domain-containing protein | - |
| GL187_RS05275 () | 1030634..1031393 | + | 760 | Protein_1039 | zeta toxin family protein | - |
| GL187_RS05280 () | 1031421..1032577 | + | 1157 | Protein_1040 | hypothetical protein | - |
| GL187_RS05285 () | 1033396..1033755 | + | 360 | WP_000003745.1 | hypothetical protein | - |
| GL187_RS05290 () | 1033765..1034130 | + | 366 | WP_000263051.1 | MobC family plasmid mobilization relaxosome protein | - |
| GL187_RS05295 () | 1034117..1035982 | + | 1866 | WP_000261795.1 | relaxase/mobilization nuclease domain-containing protein | - |
| GL187_RS05300 () | 1036027..1036881 | - | 855 | WP_000837492.1 | XRE/MutR family transcriptional regulator | - |
| GL187_RS05305 () | 1036961..1037023 | + | 63 | WP_133457516.1 | SHP2/SHP3 family peptide pheromone | - |
| GL187_RS05310 () | 1037104..1037652 | + | 549 | WP_000059559.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|