MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46829 bp
Accession: NZ_CP046377 Location: 4631164..4677992 Organism: Pectobacterium polaris strain PZ1 Replicon: chromosome
Accession: NZ_CP046377 Location: 4631164..4677992 Organism: Pectobacterium polaris strain PZ1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GMX10_RS21080 () | 4626267..4627742 | + | 1476 | WP_161547195.1 | sensor domain-containing diguanylate cyclase | - |
| GMX10_RS21085 () | 4627824..4627991 | - | 168 | WP_039480104.1 | YqaE/Pmp3 family membrane protein | - |
| GMX10_RS21090 () | 4628518..4628916 | + | 399 | WP_039480102.1 | H-NS histone family protein | - |
| GMX10_RS21100 () | 4630196..4630993 | + | 798 | WP_039480098.1 | DgsA anti-repressor MtfA | - |
| GMX10_RS21110 () | 4631341..4632612 | + | 1272 | WP_039513760.1 | hypothetical protein ; Integrase | Integrase |
| GMX10_RS21115 () | 4632744..4633058 | - | 315 | WP_025918867.1 | helix-turn-helix domain-containing protein | - |
| GMX10_RS21120 () | 4633243..4633557 | - | 315 | WP_039513758.1 | helix-turn-helix domain-containing protein | - |
| GMX10_RS21125 () | 4633704..4633976 | + | 273 | WP_014699383.1 | helix-turn-helix domain-containing protein | - |
| GMX10_RS21130 () | 4634391..4635305 | + | 915 | WP_052237792.1 | hypothetical protein | - |
| GMX10_RS21135 () | 4635459..4635653 | + | 195 | WP_024108950.1 | AlpA family transcriptional regulator | - |
| GMX10_RS21140 () | 4635670..4636253 | + | 584 | Protein_4135 | DUF2857 domain-containing protein | - |
| GMX10_RS21145 () | 4636243..4636452 | + | 210 | WP_039513753.1 | TraR/DksA family transcriptional regulator | - |
| GMX10_RS21150 () | 4636919..4637677 | - | 759 | WP_039513750.1 | MOSC domain-containing protein | - |
| GMX10_RS21155 () | 4637674..4638366 | - | 693 | WP_039513747.1 | hypothetical protein | - |
| GMX10_RS21160 () | 4638368..4639012 | - | 645 | WP_039513744.1 | LysE family translocator | - |
| GMX10_RS21165 () | 4639015..4639686 | - | 672 | WP_039513742.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| GMX10_RS21170 () | 4639720..4640751 | - | 1032 | WP_039513740.1 | hypothetical protein | - |
| GMX10_RS21175 () | 4640748..4641503 | - | 756 | WP_039513738.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| GMX10_RS21180 () | 4641525..4642205 | - | 681 | WP_052237791.1 | YqcI/YcgG family protein | - |
| GMX10_RS21185 () | 4644145..4644366 | + | 222 | WP_039513735.1 | hypothetical protein | - |
| GMX10_RS21190 () | 4644446..4645111 | + | 666 | WP_039513734.1 | hypothetical protein | VF |
| GMX10_RS21195 () | 4645108..4645389 | + | 282 | WP_107332632.1 | TrbC/VirB2 family protein | - |
| GMX10_RS21200 () | 4645399..4648146 | + | 2748 | WP_039513731.1 | hypothetical protein | VF |
| GMX10_RS21205 () | 4648170..4648886 | + | 717 | WP_039513729.1 | type IV secretion system protein | - |
| GMX10_RS21210 () | 4648897..4649121 | + | 225 | WP_039513726.1 | EexN family lipoprotein | - |
| GMX10_RS21215 () | 4649133..4650173 | + | 1041 | WP_039513725.1 | type IV secretion system protein | - |
| GMX10_RS21220 () | 4650394..4651078 | + | 685 | Protein_4151 | hypothetical protein | VF |
| GMX10_RS21225 () | 4651075..4651968 | + | 894 | WP_111778811.1 | P-type conjugative transfer protein VirB9 | - |
| GMX10_RS21230 () | 4651965..4653197 | + | 1233 | WP_161547088.1 | hypothetical protein | VF |
| GMX10_RS21235 () | 4653187..4654202 | + | 1016 | Protein_4154 | P-type DNA transfer ATPase VirB11 | - |
| GMX10_RS21240 () | 4654246..4654548 | + | 303 | WP_161547089.1 | conjugal transfer protein | - |
| GMX10_RS21245 () | 4655342..4657078 | + | 1737 | WP_039513716.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GMX10_RS21250 () | 4657087..4657839 | + | 753 | WP_039513714.1 | hypothetical protein | - |
| GMX10_RS21255 () | 4657873..4658187 | - | 315 | WP_039513711.1 | CcdB family protein | Toxin Detail |
| GMX10_RS21260 () | 4658190..4658426 | - | 237 | WP_014699357.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| GMX10_RS21265 () | 4658748..4659692 | - | 945 | WP_039513709.1 | DUF1738 domain-containing protein | - |
| GMX10_RS21270 () | 4660299..4663385 | - | 3087 | WP_052237790.1 | efflux RND transporter permease subunit | - |
| GMX10_RS21275 () | 4663382..4666470 | - | 3089 | Protein_4162 | multidrug transporter subunit MdtC | - |
| GMX10_RS21280 () | 4666571..4667524 | - | 954 | WP_161547090.1 | Multidrug resistance protein MdtA | VF |
| GMX10_RS21285 () | 4667777..4668523 | - | 747 | WP_039513702.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| GMX10_RS21290 () | 4668539..4668994 | - | 456 | WP_052237787.1 | hypothetical protein | - |
| GMX10_RS21295 () | 4668984..4669337 | - | 354 | WP_039513700.1 | hypothetical protein | - |
| GMX10_RS21300 () | 4669334..4670284 | - | 951 | WP_039513699.1 | hypothetical protein | - |
| GMX10_RS21305 () | 4670277..4671500 | - | 1224 | WP_039513697.1 | hypothetical protein | VF |
| GMX10_RS21310 () | 4671497..4671763 | - | 267 | WP_039513695.1 | Acyl carrier protein | VF |
| GMX10_RS21315 () | 4671778..4672386 | - | 609 | WP_039513694.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| GMX10_RS21320 () | 4672383..4673276 | - | 894 | WP_039513693.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GMX10_RS21325 () | 4673273..4673830 | - | 558 | WP_039513692.1 | phosphoglycerate mutase family protein | - |
| GMX10_RS21330 () | 4673827..4674567 | - | 741 | WP_156890175.1 | hypothetical protein | - |
| GMX10_RS21335 () | 4674584..4675750 | - | 1167 | WP_039513688.1 | pyridoxal phosphate-dependent aminotransferase family protein | - |
| GMX10_RS21340 () | 4675761..4676822 | - | 1062 | WP_161547091.1 | GNAT family N-acetyltransferase | - |
| GMX10_RS21345 () | 4677229..4677474 | - | 246 | Protein_4176 | transposase | - |
| GMX10_RS21350 () | 4677573..4677838 | + | 266 | Protein_4177 | hypothetical protein | - |
| GMX10_RS21355 () | 4678172..4679449 | + | 1278 | WP_039291127.1 | integrase arm-type DNA-binding domain-containing protein | - |
| GMX10_RS21360 () | 4679530..4679955 | + | 426 | WP_039513683.1 | ATP-binding protein | - |
| GMX10_RS21365 () | 4679993..4681015 | - | 1023 | WP_111778397.1 | hypothetical protein | - |
| GMX10_RS21370 () | 4681336..4682316 | - | 981 | WP_161547197.1 | DUF4238 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|