MGE detailed information
MGE type: Prophage MGE length: 28615 bp
Accession: NZ_CP046286 Location: 4831607..4860221 Organism: Shigella sonnei strain FDAARGOS_715 Replicon: chromosome
Accession: NZ_CP046286 Location: 4831607..4860221 Organism: Shigella sonnei strain FDAARGOS_715 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC23_RS25175 (4826997) | 4826997..4827683 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| FOC23_RS25180 (4827860) | 4827860..4828063 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FOC23_RS25185 (4828099) | 4828099..4829559 | - | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| FOC23_RS25195 (4830528) | 4830528..4831610 | - | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| FOC23_RS25200 (4831607) | 4831607..4833439 | - | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| FOC23_RS25205 (4833654) | 4833654..4834010 | - | 357 | WP_005140877.1 | hypothetical protein | - |
| FOC23_RS25210 (4834068) | 4834068..4834490 | - | 423 | WP_001151171.1 | DUF977 family protein | - |
| FOC23_RS25215 (4834506) | 4834506..4835231 | - | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| FOC23_RS25220 (4835253) | 4835253..4835999 | - | 747 | WP_000788740.1 | ATP-binding protein | - |
| FOC23_RS25225 (4836006) | 4836006..4837070 | - | 1065 | WP_001262380.1 | hypothetical protein | - |
| FOC23_RS25230 (4837142) | 4837142..4837567 | - | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| FOC23_RS25235 (4837564) | 4837564..4837827 | - | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| FOC23_RS25240 (4837954) | 4837954..4838439 | + | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| FOC23_RS25245 (4838459) | 4838459..4838653 | + | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| FOC23_RS25250 (4838653) | 4838653..4838943 | + | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FOC23_RS25255 (4839222) | 4839222..4839374 | + | 153 | WP_000379558.1 | DUF1391 family protein | - |
| FOC23_RS25260 (4839386) | 4839386..4839751 | + | 366 | WP_024174355.1 | hypothetical protein | - |
| FOC23_RS25270 (4841129) | 4841129..4841917 | + | 789 | Protein_4749 | Rha family transcriptional regulator | - |
| FOC23_RS25280 (4842666) | 4842666..4843742 | + | 1077 | Protein_4751 | molybdopterin-dependent oxidoreductase | - |
| FOC23_RS25285 (4843753) | 4843753..4844370 | + | 618 | WP_156008906.1 | dimethylsulfoxide reductase subunit B | - |
| FOC23_RS25290 (4844372) | 4844372..4845226 | + | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| FOC23_RS25295 (4845269) | 4845269..4845883 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| FOC23_RS25300 (4846042) | 4846042..4847334 | + | 1293 | WP_071787903.1 | voltage-gated ClC-type chloride channel ClcB | - |
| FOC23_RS25305 (4847287) | 4847287..4847982 | - | 696 | WP_000893462.1 | dethiobiotin synthase | - |
| FOC23_RS25310 (4848107) | 4848107..4849327 | - | 1221 | WP_000225252.1 | DNA-binding transcriptional repressor Mlc | - |
| FOC23_RS25315 (4849462) | 4849462..4850355 | - | 894 | WP_001019531.1 | Hca operon transcriptional activator HcaR | VF |
| FOC23_RS25320 (4850462) | 4850462..4851715 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| FOC23_RS25325 (4852158) | 4852158..4852768 | + | 611 | Protein_4760 | IS3 family transposase IS2 | Transposase |
| FOC23_RS25330 (4852870) | 4852870..4853457 | + | 588 | Protein_4761 | IS21 family transposase IS640 | Transposase |
| FOC23_RS25340 (4854719) | 4854719..4855309 | + | 591 | Protein_4763 | IS21 family transposase IS21 | Transposase |
| FOC23_RS25345 (4855309) | 4855309..4856106 | + | 798 | WP_000544819.1 | IS21 family transposase IS21 | Transposase |
| FOC23_RS25350 (4856160) | 4856160..4856423 | + | 264 | Protein_4765 | integrase core domain-containing protein | - |
| FOC23_RS25355 (4856435) | 4856435..4856590 | + | 156 | Protein_4766 | type 1 fimbrial protein | - |
| FOC23_RS25360 (4856694) | 4856694..4857608 | + | 915 | WP_000520682.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| FOC23_RS25365 (4857942) | 4857942..4860221 | + | 2280 | WP_000726664.1 | acid resistance putative oxidoreductase YdeP | - |
| FOC23_RS25370 (4860469) | 4860469..4860666 | + | 198 | WP_000271372.1 | two-component system connector SafA | - |
| FOC23_RS25375 (4860741) | 4860741..4861502 | + | 762 | WP_000060491.1 | acid stress response transcriptional regulator YdeO | - |
| FOC23_RS25380 (4861903) | 4861903..4863585 | + | 1683 | WP_011310211.1 | sulfatase | - |
| FOC23_RS25385 (4863637) | 4863637..4864794 | + | 1158 | WP_024261316.1 | anaerobic sulfatase maturase | - |
| FOC23_RS25390 (4864760) | 4864760..4864882 | - | 123 | WP_120795387.1 | protein YneP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|