MGE detailed information
MGE type: IScluster/Tn MGE length: 21016 bp
Accession: NZ_CP046285 Location: 19847..40862 Organism: Shigella sonnei strain FDAARGOS_715 Replicon: plasmid unnamed1
Accession: NZ_CP046285 Location: 19847..40862 Organism: Shigella sonnei strain FDAARGOS_715 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC23_RS00090 (FOC23_00090) | 16880..17278 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FOC23_RS00095 (FOC23_00095) | 17278..17505 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FOC23_RS00100 (FOC23_00100) | 17587..19803 | + | 2217 | Protein_17 | conjugative transfer relaxase/helicase TraI | - |
| FOC23_RS00110 (FOC23_00110) | 21065..23125 | + | 2061 | Protein_19 | AAA family ATPase | - |
| FOC23_RS00115 (FOC23_00115) | 23194..24350 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| FOC23_RS00120 (FOC23_00120) | 24393..25391 | + | 999 | Protein_21 | Multifunctional conjugation protein TraI | Relaxase |
| FOC23_RS00125 (FOC23_00125) | 25411..26158 | + | 748 | Protein_22 | conjugal transfer pilus acetylase TraX | - |
| FOC23_RS00130 (FOC23_00130) | 26213..26773 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| FOC23_RS00135 (FOC23_00135) | 26903..27115 | + | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| FOC23_RS00140 (FOC23_00140) | 27359..27820 | + | 462 | WP_001233865.1 | thermonuclease family protein | - |
| FOC23_RS00145 (FOC23_00145) | 27866..28075 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| FOC23_RS00150 (FOC23_00150) | 28114..28359 | + | 246 | Protein_27 | hypothetical protein | - |
| FOC23_RS00160 (FOC23_00160) | 29128..29481 | + | 354 | Protein_29 | DUF2726 domain-containing protein | - |
| FOC23_RS00165 (FOC23_00165) | 29721..29981 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| FOC23_RS00170 (FOC23_00170) | 30205..30279 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| FOC23_RS00175 (FOC23_00175) | 30272..31129 | + | 858 | WP_000130974.1 | incFII family plasmid replication initiator RepA | - |
| FOC23_RS25560 | 31829..32020 | + | 192 | WP_000829591.1 | hypothetical protein | - |
| FOC23_RS00180 (FOC23_00180) | 32093..32344 | + | 252 | WP_001132903.1 | plasmid stabilization protein | Antitoxin Detail |
| FOC23_RS00185 (FOC23_00185) | 32341..32628 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FOC23_RS00190 (FOC23_00190) | 32861..34060 | - | 1200 | WP_000947184.1 | IS91 family transposase ISSbo1 | Transposase |
| FOC23_RS00195 (FOC23_00195) | 34070..34258 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| FOC23_RS00200 (FOC23_00200) | 34380..34538 | + | 159 | Protein_38 | transposase | - |
| FOC23_RS00205 (FOC23_00205) | 34677..34832 | + | 156 | Protein_39 | IS256 family transposase ISEc39 | Transposase |
| FOC23_RS00210 (FOC23_00210) | 34862..36589 | - | 1728 | WP_000597732.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| FOC23_RS00215 (FOC23_00215) | 36980..37199 | - | 220 | Protein_41 | hypothetical protein | - |
| FOC23_RS00220 (FOC23_00220) | 37356..37453 | - | 98 | Protein_42 | IS1 family transposase | - |
| FOC23_RS00225 (FOC23_00225) | 37640..38827 | - | 1188 | WP_000937570.1 | IS91 family transposase ISEc37 | Transposase |
| FOC23_RS00230 (FOC23_00230) | 38827..39012 | - | 186 | WP_000338652.1 | hypothetical protein | - |
| FOC23_RS00240 (FOC23_00240) | 40283..40459 | - | 177 | WP_000124109.1 | hypothetical protein | - |
| FOC23_RS00245 (FOC23_00245) | 40548..40862 | + | 315 | Protein_47 | IS630 family transposase IS630 | Transposase |
| FOC23_RS00250 (FOC23_00250) | 41211..42317 | + | 1107 | WP_000030546.1 | Wzz/FepE/Etk N-terminal domain-containing protein | - |
| FOC23_RS00255 (FOC23_00255) | 42386..43666 | + | 1281 | WP_005138823.1 | Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB | - |
| FOC23_RS00260 (FOC23_00260) | 43759..44784 | + | 1026 | WP_000092504.1 | NAD-dependent epimerase/dehydratase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|