MGE detailed information
MGE type: Prophage MGE length: 87843 bp
Accession: NZ_CP046114 Location: 930099..1017941 Organism: Glaesserella parasuis strain SCW0912 Replicon: chromosome
Accession: NZ_CP046114 Location: 930099..1017941 Organism: Glaesserella parasuis strain SCW0912 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV39_RS04650 () | 927694..928077 | + | 384 | WP_021109639.1 | 30S ribosome-binding factor RbfA | - |
| GJV39_RS04655 () | 928080..928997 | + | 918 | WP_021109638.1 | tRNA pseudouridine(55) synthase TruB | - |
| GJV39_RS04660 () | 929007..930089 | + | 1083 | WP_035498889.1 | lytic murein transglycosylase | - |
| GJV39_RS04665 () | 930099..930917 | + | 819 | WP_021109636.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| GJV39_RS04675 () | 931305..932548 | + | 1244 | Protein_885 | tyrosine-type recombinase/integrase | - |
| GJV39_RS04680 () | 932537..932740 | - | 204 | WP_005713720.1 | hypothetical protein | - |
| GJV39_RS04685 () | 932829..933432 | - | 604 | Protein_887 | Bro-N domain-containing protein | - |
| GJV39_RS04690 () | 934017..934550 | - | 534 | WP_010786726.1 | hypothetical protein | - |
| GJV39_RS04695 () | 934806..935048 | - | 243 | WP_005713710.1 | hypothetical protein | - |
| GJV39_RS04700 () | 935392..935613 | - | 222 | WP_020997039.1 | hypothetical protein | - |
| GJV39_RS04705 () | 935628..935813 | + | 186 | WP_020997221.1 | YegP family protein | - |
| GJV39_RS04710 () | 935839..936126 | - | 288 | WP_012621801.1 | hypothetical protein | - |
| GJV39_RS04715 () | 936730..937176 | - | 447 | WP_005714539.1 | hypothetical protein | - |
| GJV39_RS04720 () | 937236..937526 | + | 291 | WP_005714537.1 | putative addiction module antidote protein | - |
| GJV39_RS04725 () | 937554..938393 | - | 840 | WP_005714536.1 | DUF3800 domain-containing protein | - |
| GJV39_RS04730 () | 938574..939422 | - | 849 | WP_005714534.1 | KilA-N domain-containing protein | - |
| GJV39_RS04735 () | 939522..940205 | - | 684 | WP_021109615.1 | helix-turn-helix transcriptional regulator | - |
| GJV39_RS04740 () | 940336..940536 | + | 201 | WP_016527563.1 | helix-turn-helix domain-containing protein | - |
| GJV39_RS04745 () | 940557..940832 | + | 276 | WP_021109614.1 | bacteriophage CII family protein | - |
| GJV39_RS04750 () | 940816..941598 | + | 783 | WP_021109626.1 | Rha family transcriptional regulator | - |
| GJV39_RS04755 () | 941595..942425 | + | 831 | WP_035497995.1 | hypothetical protein | - |
| GJV39_RS04760 () | 942425..943099 | + | 675 | WP_051502669.1 | hypothetical protein | - |
| GJV39_RS04765 () | 943194..943622 | + | 429 | WP_035498003.1 | recombination protein NinB | - |
| GJV39_RS04770 () | 943656..944069 | - | 414 | WP_005715065.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GJV39_RS04775 () | 944096..944278 | - | 183 | WP_005715063.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GJV39_RS04780 () | 944525..945094 | + | 570 | WP_035497972.1 | recombination protein NinG | - |
| GJV39_RS04785 () | 945196..946404 | + | 1209 | WP_021109463.1 | IS256 family transposase | - |
| GJV39_RS04790 () | 946411..946791 | + | 381 | WP_035498288.1 | antitermination protein | - |
| GJV39_RS04800 () | 946976..948184 | - | 1209 | WP_035498286.1 | IS256 family transposase | - |
| GJV39_RS04805 () | 948232..948573 | - | 342 | Protein_910 | type II toxin-antitoxin system HicB family antitoxin | - |
| GJV39_RS04810 () | 948603..948788 | - | 186 | WP_005714898.1 | type II toxin-antitoxin system HicA family toxin | - |
| GJV39_RS04815 () | 949029..949304 | + | 276 | WP_012621834.1 | hypothetical protein | - |
| GJV39_RS04820 () | 949279..949824 | + | 546 | WP_020996993.1 | lysozyme | - |
| GJV39_RS04825 () | 949797..950141 | + | 345 | WP_021109620.1 | DUF2570 family protein | - |
| GJV39_RS11960 () | 950035..950319 | + | 285 | WP_187325697.1 | hypothetical protein | - |
| GJV39_RS04835 () | 950706..951221 | + | 516 | WP_035498305.1 | terminase small subunit | - |
| GJV39_RS04840 () | 951205..952422 | + | 1218 | WP_035498309.1 | PBSX family phage terminase large subunit | - |
| GJV39_RS04845 () | 952428..953948 | + | 1521 | WP_021110525.1 | DUF1073 domain-containing protein | - |
| GJV39_RS04850 () | 953911..954777 | + | 867 | WP_005713545.1 | minor capsid protein | - |
| GJV39_RS04855 () | 954877..956148 | + | 1272 | WP_021110526.1 | DUF2213 domain-containing protein | - |
| GJV39_RS04860 () | 956160..956672 | + | 513 | WP_005713548.1 | hypothetical protein | - |
| GJV39_RS04865 () | 956693..957826 | + | 1134 | WP_005713549.1 | DUF2184 domain-containing protein | - |
| GJV39_RS04870 () | 957890..958255 | + | 366 | WP_005713552.1 | hypothetical protein | - |
| GJV39_RS04875 () | 958258..958686 | + | 429 | WP_005713553.1 | DUF4054 domain-containing protein | - |
| GJV39_RS04880 () | 958683..959183 | + | 501 | WP_005713554.1 | hypothetical protein | - |
| GJV39_RS04885 () | 959183..959380 | + | 198 | WP_021110527.1 | hypothetical protein | - |
| GJV39_RS04890 () | 959588..960022 | + | 435 | WP_021110528.1 | hypothetical protein | - |
| GJV39_RS04895 () | 960023..960403 | + | 381 | WP_021110529.1 | hypothetical protein | - |
| GJV39_RS04900 () | 960388..960894 | + | 507 | WP_021110530.1 | hypothetical protein | - |
| GJV39_RS04905 () | 960904..962382 | + | 1479 | WP_021110531.1 | DUF3383 domain-containing protein | - |
| GJV39_RS04910 () | 962448..962891 | + | 444 | WP_005713568.1 | hypothetical protein | - |
| GJV39_RS04915 () | 963025..963429 | + | 405 | WP_005713569.1 | hypothetical protein | - |
| GJV39_RS11965 () | 963456..963608 | + | 153 | WP_005713570.1 | hypothetical protein | - |
| GJV39_RS04920 () | 963601..966105 | + | 2505 | WP_021110533.1 | lysM domain protein | - |
| GJV39_RS04925 () | 966287..966565 | - | 279 | WP_021110534.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GJV39_RS04930 () | 966525..966770 | - | 246 | WP_005713578.1 | ribbon-helix-helix domain-containing protein | - |
| GJV39_RS04935 () | 966996..967700 | + | 705 | WP_021110535.1 | hypothetical protein | - |
| GJV39_RS04940 () | 967691..967999 | + | 309 | WP_005713581.1 | hypothetical protein | - |
| GJV39_RS04945 () | 968001..968888 | + | 888 | WP_005713583.1 | hypothetical protein | - |
| GJV39_RS04950 () | 968899..969555 | + | 657 | WP_021110536.1 | hypothetical protein | - |
| GJV39_RS04955 () | 969559..969909 | + | 351 | WP_021110537.1 | hypothetical protein | - |
| GJV39_RS04960 () | 969906..971093 | + | 1188 | WP_021110538.1 | baseplate J/gp47 family protein | - |
| GJV39_RS04965 () | 971090..971707 | + | 618 | WP_005713594.1 | DUF2612 domain-containing protein | - |
| GJV39_RS04970 () | 972088..972510 | + | 423 | Protein_944 | tail fiber protein | - |
| GJV39_RS04975 () | 972523..973935 | + | 1413 | Protein_945 | phage tail protein | - |
| GJV39_RS04980 () | 973945..974511 | + | 567 | WP_021109854.1 | DUF4376 domain-containing protein | - |
| GJV39_RS04985 () | 974504..974965 | + | 462 | WP_021109855.1 | hypothetical protein | - |
| GJV39_RS04990 () | 975129..975326 | - | 198 | WP_015939642.1 | hypothetical protein | - |
| GJV39_RS04995 () | 975490..975897 | - | 408 | WP_005714406.1 | hypothetical protein | - |
| GJV39_RS05000 () | 975897..976091 | - | 195 | WP_005714404.1 | hypothetical protein | - |
| GJV39_RS05005 () | 976258..976812 | - | 555 | WP_016527906.1 | DUF4760 domain-containing protein | - |
| GJV39_RS05010 () | 977009..977806 | - | 798 | WP_021109856.1 | hypothetical protein | - |
| GJV39_RS05015 () | 978196..978414 | + | 219 | WP_012621817.1 | hypothetical protein | - |
| GJV39_RS05020 () | 978421..978861 | - | 441 | WP_035498117.1 | hypothetical protein | - |
| GJV39_RS05025 () | 978915..979556 | - | 642 | WP_035498115.1 | hypothetical protein | - |
| GJV39_RS05030 () | 979558..980214 | - | 657 | WP_021110503.1 | AAA family ATPase | - |
| GJV39_RS05035 () | 980279..980755 | - | 477 | WP_035498112.1 | siphovirus Gp157 family protein | - |
| GJV39_RS11970 () | 980835..981041 | - | 207 | WP_035498110.1 | hypothetical protein | - |
| GJV39_RS05040 () | 981028..981567 | - | 540 | WP_035498100.1 | hypothetical protein | - |
| GJV39_RS05045 () | 981564..981884 | - | 321 | WP_021109602.1 | hypothetical protein | - |
| GJV39_RS05050 () | 981967..982611 | - | 645 | WP_035498099.1 | antirepressor | - |
| GJV39_RS05055 () | 982859..983884 | - | 1026 | WP_021109600.1 | hypothetical protein | - |
| GJV39_RS05060 () | 984216..984749 | - | 534 | WP_010786726.1 | hypothetical protein | - |
| GJV39_RS05065 () | 985005..985247 | - | 243 | WP_005713710.1 | hypothetical protein | - |
| GJV39_RS05070 () | 985591..985812 | - | 222 | WP_020997039.1 | hypothetical protein | - |
| GJV39_RS05075 () | 985827..986012 | + | 186 | WP_020997221.1 | YegP family protein | - |
| GJV39_RS05080 () | 986038..986325 | - | 288 | WP_012621801.1 | hypothetical protein | - |
| GJV39_RS05085 () | 986847..987311 | - | 465 | WP_005714819.1 | hypothetical protein | - |
| GJV39_RS05090 () | 987295..988242 | - | 948 | WP_005714821.1 | hypothetical protein | - |
| GJV39_RS05095 () | 988308..989000 | - | 693 | WP_035498097.1 | helix-turn-helix transcriptional regulator | - |
| GJV39_RS05100 () | 989122..989346 | + | 225 | WP_035498095.1 | helix-turn-helix domain-containing protein | - |
| GJV39_RS05105 () | 989619..990401 | + | 783 | WP_021109626.1 | Rha family transcriptional regulator | - |
| GJV39_RS05110 () | 990398..991228 | + | 831 | WP_035497995.1 | hypothetical protein | - |
| GJV39_RS05115 () | 991228..991902 | + | 675 | WP_021109624.1 | replication P family protein | - |
| GJV39_RS05120 () | 991997..992425 | + | 429 | WP_021109623.1 | recombination protein NinB | - |
| GJV39_RS05125 () | 992557..993752 | + | 1196 | Protein_976 | IS256 family transposase | - |
| GJV39_RS05130 () | 993759..994139 | + | 381 | WP_035498288.1 | antitermination protein | - |
| GJV39_RS05135 () | 994148..994366 | - | 219 | WP_012621837.1 | hypothetical protein | - |
| GJV39_RS11975 () | 994663..994839 | + | 177 | WP_005714781.1 | hypothetical protein | - |
| GJV39_RS05140 () | 995221..995784 | - | 564 | WP_005714778.1 | hypothetical protein | - |
| GJV39_RS05145 () | 995898..996173 | + | 276 | WP_016527880.1 | hypothetical protein | - |
| GJV39_RS05150 () | 996148..996693 | + | 546 | WP_035498439.1 | lysozyme | - |
| GJV39_RS05155 () | 996666..997010 | + | 345 | WP_035498442.1 | DUF2570 family protein | - |
| GJV39_RS11980 () | 996904..997188 | + | 285 | WP_187325697.1 | hypothetical protein | - |
| GJV39_RS05165 () | 997357..997809 | + | 453 | WP_020997291.1 | terminase small subunit | - |
| GJV39_RS05170 () | 997793..999028 | + | 1236 | WP_035498445.1 | PBSX family phage terminase large subunit | - |
| GJV39_RS05175 () | 999038..1000435 | + | 1398 | WP_035498448.1 | DUF4055 domain-containing protein | - |
| GJV39_RS05180 () | 1000392..1001612 | + | 1221 | WP_051502683.1 | minor capsid protein | - |
| GJV39_RS05185 () | 1001572..1002541 | - | 970 | Protein_989 | transposase | - |
| GJV39_RS05190 () | 1002584..1003258 | + | 675 | WP_035498351.1 | recombinase | - |
| GJV39_RS05195 () | 1003473..1004231 | + | 759 | WP_021109537.1 | hypothetical protein | - |
| GJV39_RS05200 () | 1004243..1005181 | + | 939 | WP_021109529.1 | Ig domain-containing protein | - |
| GJV39_RS05205 () | 1005267..1005608 | + | 342 | WP_021109528.1 | heH/LEM domain protein | - |
| GJV39_RS05210 () | 1005583..1006044 | + | 462 | WP_021109527.1 | hypothetical protein | - |
| GJV39_RS05215 () | 1006046..1006417 | + | 372 | WP_021109526.1 | hypothetical protein | - |
| GJV39_RS05220 () | 1006419..1006622 | + | 204 | WP_021109599.1 | HK97 gp10 family phage protein | - |
| GJV39_RS05225 () | 1006666..1006857 | - | 192 | WP_005713940.1 | hypothetical protein | - |
| GJV39_RS05230 () | 1007001..1007432 | - | 432 | WP_005713942.1 | type II toxin-antitoxin system YafO family toxin | - |
| GJV39_RS05235 () | 1007425..1007943 | - | 519 | WP_005713944.1 | hypothetical protein | - |
| GJV39_RS05240 () | 1008051..1010933 | - | 2883 | WP_021109598.1 | tail protein T | - |
| GJV39_RS05245 () | 1011000..1011347 | + | 348 | WP_005713952.1 | hypothetical protein | - |
| GJV39_RS05250 () | 1011357..1011818 | - | 462 | WP_005713954.1 | phage virion morphogenesis protein | - |
| GJV39_RS05255 () | 1011859..1012293 | - | 435 | WP_005713956.1 | phage tail protein | - |
| GJV39_RS05260 () | 1012290..1012508 | - | 219 | WP_005713957.1 | TraR/DksA family transcriptional regulator | - |
| GJV39_RS05265 () | 1012621..1013040 | - | 420 | WP_005713958.1 | type II toxin-antitoxin system YafO family toxin | - |
| GJV39_RS05270 () | 1013037..1013234 | - | 198 | WP_005713959.1 | hypothetical protein | - |
| GJV39_RS05275 () | 1013293..1013487 | - | 195 | WP_005713960.1 | hypothetical protein | - |
| GJV39_RS05280 () | 1013696..1014163 | - | 468 | WP_005713962.1 | hypothetical protein | - |
| GJV39_RS05285 () | 1014148..1014672 | - | 525 | WP_005713963.1 | lysozyme | - |
| GJV39_RS05290 () | 1014656..1014793 | - | 138 | WP_010786754.1 | hypothetical protein | - |
| GJV39_RS05295 () | 1014828..1015481 | - | 654 | WP_012621779.1 | terminase | - |
| GJV39_RS05300 () | 1015481..1015684 | - | 204 | WP_016528073.1 | hypothetical protein | - |
| GJV39_RS05305 () | 1015697..1016512 | - | 816 | WP_016528072.1 | GPO family capsid scaffolding protein | - |
| GJV39_RS05310 () | 1016680..1016976 | + | 297 | WP_005713972.1 | helix-turn-helix domain-containing protein | - |
| GJV39_RS05315 () | 1017197..1017941 | + | 745 | Protein_1015 | transposase | - |
| GJV39_RS05320 () | 1018130..1018315 | - | 186 | WP_005713975.1 | zf-HC2 domain-containing protein | - |
| GJV39_RS05325 () | 1018312..1018884 | - | 573 | WP_005713976.1 | sigma-70 family RNA polymerase sigma factor | - |
| GJV39_RS05330 () | 1019026..1019388 | + | 363 | WP_005713977.1 | hypothetical protein | - |
| GJV39_RS05335 () | 1019492..1020562 | + | 1071 | WP_035494346.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| GJV39_RS05340 () | 1020564..1021214 | + | 651 | WP_005713980.1 | cytochrome c biogenesis protein CcdA | - |
| GJV39_RS05345 () | 1021232..1021711 | + | 480 | WP_010786761.1 | redoxin family protein | - |
| GJV39_RS05350 () | 1021880..1022182 | - | 303 | Protein_1022 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|