MGE detailed information
MGE type: Prophage MGE length: 40213 bp
Accession: NZ_CP046114 Location: 573448..613660 Organism: Glaesserella parasuis strain SCW0912 Replicon: chromosome
Accession: NZ_CP046114 Location: 573448..613660 Organism: Glaesserella parasuis strain SCW0912 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV39_RS02885 () | 569696..570787 | + | 1092 | WP_035492395.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| GJV39_RS02890 () | 570789..571433 | + | 645 | WP_010786213.1 | riboflavin synthase | - |
| GJV39_RS02895 () | 571565..572764 | + | 1200 | WP_016527538.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| GJV39_RS02900 () | 572863..573324 | + | 462 | WP_010786211.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| GJV39_RS02905 () | 573448..574239 | - | 792 | WP_016527540.1 | ABC transporter ATP-binding protein | - |
| GJV39_RS02910 () | 574239..575174 | - | 936 | WP_016527541.1 | ABC transporter inner membrane subunit | - |
| GJV39_RS02915 () | 575368..575586 | + | 219 | WP_005712153.1 | YgjV family protein | - |
| GJV39_RS11940 () | 575700..575840 | - | 141 | WP_005712155.1 | hypothetical protein | - |
| GJV39_RS02920 () | 575865..577286 | - | 1422 | WP_021109850.1 | membrane-bound lytic murein transglycosylase MltF | - |
| GJV39_RS02925 () | 577414..578268 | - | 855 | WP_010786207.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| GJV39_RS02940 () | 578671..579726 | - | 1056 | WP_021109851.1 | site-specific integrase | - |
| GJV39_RS02945 () | 579630..579935 | - | 306 | WP_016527543.1 | helix-turn-helix domain-containing protein | - |
| GJV39_RS02950 () | 580025..580828 | - | 804 | WP_021109852.1 | hypothetical protein | - |
| GJV39_RS02955 () | 581281..581661 | - | 381 | WP_005712166.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GJV39_RS02960 () | 582027..582239 | + | 213 | WP_005712169.1 | hypothetical protein | - |
| GJV39_RS02965 () | 582258..582521 | - | 264 | WP_005712171.1 | hypothetical protein | - |
| GJV39_RS02970 () | 582545..583264 | - | 720 | WP_021109859.1 | hypothetical protein | - |
| GJV39_RS02975 () | 583608..583796 | + | 189 | WP_010786201.1 | hypothetical protein | - |
| GJV39_RS02980 () | 583838..584452 | - | 615 | WP_021109860.1 | YqaJ viral recombinase family protein | - |
| GJV39_RS02985 () | 584449..585315 | - | 867 | WP_021109861.1 | phage recombination protein Bet | - |
| GJV39_RS11945 () | 585325..585951 | - | 627 | WP_021109862.1 | hypothetical protein | - |
| GJV39_RS02995 () | 585958..587166 | - | 1209 | WP_035498286.1 | IS256 family transposase | - |
| GJV39_RS03000 () | 587209..587592 | + | 384 | WP_035494815.1 | antitermination protein | - |
| GJV39_RS03005 () | 587614..588051 | - | 438 | WP_005714900.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GJV39_RS03010 () | 588081..588266 | - | 186 | WP_005714898.1 | type II toxin-antitoxin system HicA family toxin | - |
| GJV39_RS03015 () | 588507..588782 | + | 276 | WP_012621834.1 | hypothetical protein | - |
| GJV39_RS03020 () | 588757..589302 | + | 546 | WP_020996993.1 | lysozyme | - |
| GJV39_RS03025 () | 589275..589619 | + | 345 | WP_026916566.1 | DUF2570 family protein | - |
| GJV39_RS11950 () | 589513..589797 | + | 285 | WP_187325700.1 | hypothetical protein | - |
| GJV39_RS03035 () | 590113..590580 | + | 468 | WP_005714379.1 | DUF1441 family protein | - |
| GJV39_RS03040 () | 590580..592700 | + | 2121 | WP_005714376.1 | phage terminase large subunit family protein | - |
| GJV39_RS03045 () | 592718..592939 | + | 222 | WP_005714374.1 | hypothetical protein | - |
| GJV39_RS03050 () | 592940..594439 | + | 1500 | WP_005714372.1 | phage portal protein | - |
| GJV39_RS03055 () | 594465..596432 | + | 1968 | WP_005714371.1 | Clp protease ClpP | - |
| GJV39_RS03060 () | 596500..596826 | + | 327 | WP_021109618.1 | DUF2190 family protein | - |
| GJV39_RS03065 () | 596819..597124 | + | 306 | WP_005714563.1 | phage tail protein | - |
| GJV39_RS03070 () | 597128..597661 | + | 534 | WP_005714565.1 | phage tail protein | - |
| GJV39_RS03075 () | 597661..598080 | + | 420 | WP_005714567.1 | phage tail protein | - |
| GJV39_RS03080 () | 598083..598748 | + | 666 | WP_010786321.1 | hypothetical protein | - |
| GJV39_RS03085 () | 598822..599223 | + | 402 | WP_005714571.1 | hypothetical protein | - |
| GJV39_RS03090 () | 599268..599495 | + | 228 | WP_005714573.1 | DUF4035 domain-containing protein | - |
| GJV39_RS03095 () | 599565..599831 | + | 267 | WP_005714576.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GJV39_RS03100 () | 599835..600104 | + | 270 | WP_005714578.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| GJV39_RS03105 () | 600250..600818 | - | 569 | Protein_583 | transposase | - |
| GJV39_RS03110 () | 600922..601137 | + | 216 | WP_035498906.1 | hypothetical protein | - |
| GJV39_RS03115 () | 601340..601615 | + | 276 | WP_005714514.1 | hypothetical protein | - |
| GJV39_RS03120 () | 601671..605045 | + | 3375 | WP_021110225.1 | phage tail tape measure protein | - |
| GJV39_RS03125 () | 605090..605422 | + | 333 | WP_020997028.1 | phage tail protein | - |
| GJV39_RS03130 () | 605422..606159 | + | 738 | WP_021110224.1 | phage minor tail protein L | - |
| GJV39_RS03135 () | 606239..606985 | + | 747 | WP_021110223.1 | tetratricopeptide repeat family protein | - |
| GJV39_RS03140 () | 606985..607365 | + | 381 | WP_005713886.1 | hypothetical protein | - |
| GJV39_RS03145 () | 607409..608170 | + | 762 | WP_005713885.1 | C40 family peptidase | - |
| GJV39_RS03150 () | 608200..608712 | + | 513 | WP_021110222.1 | tail assembly protein | - |
| GJV39_RS03155 () | 608766..611999 | + | 3234 | WP_021110221.1 | putative phage tail protein | - |
| GJV39_RS03160 () | 611962..612840 | + | 879 | WP_020997072.1 | DUF1983 domain-containing protein | - |
| GJV39_RS03165 () | 612869..613660 | + | 792 | WP_005713882.1 | transferrin-binding protein-like solute binding protein | - |
| GJV39_RS03175 () | 614001..614957 | - | 957 | WP_005713881.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| GJV39_RS03180 () | 615095..616462 | - | 1368 | WP_021110220.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|