MGE detailed information
MGE type: Prophage MGE length: 67552 bp
Accession: NZ_CP046114 Location: 1128230..1195781 Organism: Glaesserella parasuis strain SCW0912 Replicon: chromosome
Accession: NZ_CP046114 Location: 1128230..1195781 Organism: Glaesserella parasuis strain SCW0912 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV39_RS05775 () | 1123386..1124378 | - | 993 | WP_021109554.1 | galactose/glucose ABC transporter substrate-binding protein MglB | - |
| GJV39_RS05780 () | 1124503..1126353 | - | 1851 | WP_035498169.1 | tRNA(Met) cytidine acetyltransferase TmcA | - |
| GJV39_RS05785 () | 1126353..1126841 | - | 489 | WP_021109552.1 | rRNA maturation RNase YbeY | - |
| GJV39_RS05790 () | 1126873..1127325 | - | 453 | WP_012621728.1 | molybdopterin synthase catalytic subunit MoaE | - |
| GJV39_RS05795 () | 1127326..1127571 | - | 246 | WP_012621727.1 | molybdopterin synthase sulfur carrier subunit | - |
| GJV39_RS05800 () | 1127637..1128116 | - | 480 | WP_016527857.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| GJV39_RS05805 () | 1128230..1129249 | - | 1020 | WP_035498171.1 | GTP 3',8-cyclase MoaA | - |
| GJV39_RS05810 () | 1129676..1129978 | + | 303 | WP_005712894.1 | type II toxin-antitoxin system HigB family toxin | - |
| GJV39_RS05815 () | 1129988..1130350 | + | 363 | WP_005712896.1 | hypothetical protein | - |
| GJV39_RS05820 () | 1130390..1130536 | + | 147 | WP_020997002.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GJV39_RS05825 () | 1130613..1131011 | + | 399 | WP_005712900.1 | DUF423 domain-containing protein | - |
| GJV39_RS05830 () | 1131011..1131250 | + | 240 | Protein_1115 | methyltransferase | - |
| GJV39_RS05835 () | 1131369..1132193 | + | 825 | WP_016527861.1 | penicillin-insensitive murein endopeptidase | - |
| GJV39_RS05840 () | 1132201..1134120 | + | 1920 | WP_021109548.1 | DNA topoisomerase III | - |
| GJV39_RS05845 () | 1134246..1134575 | + | 330 | WP_005712907.1 | preprotein translocase subunit SecG | - |
| GJV39_RS05855 () | 1134998..1136230 | + | 1233 | WP_021109547.1 | tyrosine-type recombinase/integrase | - |
| GJV39_RS05860 () | 1136295..1136714 | - | 420 | WP_021109546.1 | hypothetical protein | - |
| GJV39_RS05865 () | 1138131..1138793 | + | 663 | WP_021109545.1 | hypothetical protein | - |
| GJV39_RS05870 () | 1138909..1139109 | + | 201 | WP_026916454.1 | AlpA family phage regulatory protein | - |
| GJV39_RS05875 () | 1139563..1140561 | + | 999 | WP_005712908.1 | site-specific integrase | - |
| GJV39_RS05880 () | 1140558..1140848 | - | 291 | WP_005712911.1 | hypothetical protein | - |
| GJV39_RS05885 () | 1140870..1141172 | - | 303 | WP_035498176.1 | hypothetical protein | - |
| GJV39_RS05890 () | 1141193..1141492 | - | 300 | WP_035498173.1 | hypothetical protein | - |
| GJV39_RS05895 () | 1141489..1141998 | - | 510 | WP_021109541.1 | MazG-like family protein | - |
| GJV39_RS05900 () | 1142514..1143794 | - | 1281 | WP_005714408.1 | hypothetical protein | - |
| GJV39_RS05905 () | 1143915..1144322 | - | 408 | WP_005714406.1 | hypothetical protein | - |
| GJV39_RS05910 () | 1144322..1144516 | - | 195 | WP_005714404.1 | hypothetical protein | - |
| GJV39_RS05915 () | 1144683..1145237 | - | 555 | WP_016527906.1 | DUF4760 domain-containing protein | - |
| GJV39_RS05920 () | 1145434..1146231 | - | 798 | WP_021109856.1 | hypothetical protein | - |
| GJV39_RS05925 () | 1146621..1146839 | + | 219 | WP_012621817.1 | hypothetical protein | - |
| GJV39_RS05930 () | 1146983..1147246 | - | 264 | WP_035498484.1 | hypothetical protein | - |
| GJV39_RS05935 () | 1147215..1147859 | - | 645 | WP_021109857.1 | N-6 DNA methylase | - |
| GJV39_RS05940 () | 1147861..1148643 | - | 783 | WP_021109858.1 | hypothetical protein | - |
| GJV39_RS05945 () | 1148680..1149399 | - | 720 | WP_035498712.1 | hypothetical protein | - |
| GJV39_RS05950 () | 1149746..1149934 | + | 189 | WP_012621814.1 | hypothetical protein | - |
| GJV39_RS05955 () | 1149980..1150459 | - | 480 | WP_016527549.1 | single-stranded DNA-binding protein | - |
| GJV39_RS05960 () | 1150459..1151118 | - | 660 | WP_035497980.1 | translocation protein TolB precursor | - |
| GJV39_RS05965 () | 1151181..1152107 | - | 927 | WP_016527551.1 | recombinase RecT | - |
| GJV39_RS05970 () | 1152125..1152352 | - | 228 | WP_021109604.1 | hypothetical protein | - |
| GJV39_RS05975 () | 1152342..1152878 | - | 537 | WP_021109603.1 | hypothetical protein | - |
| GJV39_RS05980 () | 1152875..1153195 | - | 321 | WP_021109602.1 | hypothetical protein | - |
| GJV39_RS05985 () | 1153278..1153922 | - | 645 | WP_035498099.1 | antirepressor | - |
| GJV39_RS05990 () | 1154170..1155195 | - | 1026 | WP_021109600.1 | hypothetical protein | - |
| GJV39_RS05995 () | 1155527..1156060 | - | 534 | WP_010786726.1 | hypothetical protein | - |
| GJV39_RS06000 () | 1156316..1156558 | - | 243 | WP_005713710.1 | hypothetical protein | - |
| GJV39_RS06005 () | 1156902..1157123 | - | 222 | WP_020997039.1 | hypothetical protein | - |
| GJV39_RS06010 () | 1157138..1157323 | + | 186 | WP_020997221.1 | YegP family protein | - |
| GJV39_RS06015 () | 1157349..1157636 | - | 288 | WP_012621801.1 | hypothetical protein | - |
| GJV39_RS06020 () | 1158164..1158583 | - | 420 | WP_021109631.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GJV39_RS06025 () | 1158623..1158805 | - | 183 | WP_012621798.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GJV39_RS06030 () | 1158926..1159717 | - | 792 | WP_021109630.1 | DUF1828 domain-containing protein | - |
| GJV39_RS06035 () | 1159717..1160208 | - | 492 | WP_021109629.1 | hypothetical protein | - |
| GJV39_RS06040 () | 1160260..1160925 | - | 666 | WP_021109628.1 | helix-turn-helix transcriptional regulator | - |
| GJV39_RS06045 () | 1161070..1161285 | + | 216 | WP_035500508.1 | helix-turn-helix domain-containing protein | - |
| GJV39_RS06050 () | 1161565..1162347 | + | 783 | WP_021109626.1 | Rha family transcriptional regulator | - |
| GJV39_RS06055 () | 1162344..1163174 | + | 831 | WP_035497995.1 | hypothetical protein | - |
| GJV39_RS06060 () | 1163174..1163848 | + | 675 | WP_021109624.1 | replication P family protein | - |
| GJV39_RS06065 () | 1163943..1164371 | + | 429 | WP_021109623.1 | recombination protein NinB | - |
| GJV39_RS06070 () | 1164368..1164721 | + | 354 | WP_035490314.1 | hypothetical protein | - |
| GJV39_RS06075 () | 1164866..1165435 | + | 570 | WP_026916882.1 | recombination protein NinG | - |
| GJV39_RS06080 () | 1165432..1165809 | + | 378 | WP_021109611.1 | ECF sigma factor family protein | - |
| GJV39_RS06085 () | 1165818..1166003 | - | 186 | WP_021109610.1 | hypothetical protein | - |
| GJV39_RS06090 () | 1166835..1167422 | + | 588 | Protein_1166 | phage antirepressor N-terminal domain-containing protein | - |
| GJV39_RS06095 () | 1167898..1168077 | + | 180 | WP_021109607.1 | hypothetical protein | - |
| GJV39_RS06100 () | 1168070..1168534 | - | 465 | WP_005714705.1 | hypothetical protein | - |
| GJV39_RS06105 () | 1168638..1168913 | + | 276 | WP_012621834.1 | hypothetical protein | - |
| GJV39_RS06110 () | 1168888..1169433 | + | 546 | WP_035498038.1 | lysozyme | - |
| GJV39_RS06115 () | 1169406..1169750 | + | 345 | WP_035498041.1 | DUF2570 family protein | - |
| GJV39_RS06120 () | 1169644..1169916 | + | 273 | WP_187325695.1 | hypothetical protein | - |
| GJV39_RS06125 () | 1170079..1170594 | + | 516 | WP_020996990.1 | terminase small subunit | - |
| GJV39_RS06130 () | 1170578..1171813 | + | 1236 | WP_035498043.1 | PBSX family phage terminase large subunit | - |
| GJV39_RS06135 () | 1171823..1173220 | + | 1398 | WP_035498045.1 | DUF4055 domain-containing protein | - |
| GJV39_RS06140 () | 1173177..1174589 | + | 1413 | WP_021109531.1 | minor capsid protein | - |
| GJV39_RS06145 () | 1174586..1174975 | + | 390 | WP_016527887.1 | hypothetical protein | - |
| GJV39_RS06150 () | 1175171..1175692 | + | 522 | WP_005714627.1 | phage antirepressor N-terminal domain-containing protein | - |
| GJV39_RS06155 () | 1175818..1176576 | + | 759 | WP_035498047.1 | hypothetical protein | - |
| GJV39_RS06160 () | 1176588..1177526 | + | 939 | WP_021109529.1 | Ig domain-containing protein | - |
| GJV39_RS06165 () | 1177612..1177953 | + | 342 | WP_016527890.1 | hypothetical protein | - |
| GJV39_RS06170 () | 1177928..1178389 | + | 462 | WP_016527891.1 | hypothetical protein | - |
| GJV39_RS06175 () | 1178391..1178741 | + | 351 | WP_035498007.1 | hypothetical protein | - |
| GJV39_RS06180 () | 1178743..1179156 | + | 414 | WP_021109525.1 | HK97 gp10 family phage protein | - |
| GJV39_RS06185 () | 1179156..1179557 | + | 402 | WP_005714381.1 | hypothetical protein | - |
| GJV39_RS06190 () | 1179560..1180564 | + | 1005 | WP_021109524.1 | hypothetical protein | - |
| GJV39_RS06195 () | 1180659..1181063 | + | 405 | WP_005714383.1 | hypothetical protein | - |
| GJV39_RS06200 () | 1181072..1181407 | + | 336 | WP_021109523.1 | hypothetical protein | - |
| GJV39_RS06205 () | 1181409..1181735 | + | 327 | WP_005714385.1 | phage tail protein | - |
| GJV39_RS06210 () | 1181789..1182049 | + | 261 | WP_021109522.1 | hypothetical protein | - |
| GJV39_RS06215 () | 1182124..1185363 | + | 3240 | WP_021109521.1 | tape measure protein | - |
| GJV39_RS06220 () | 1185373..1186110 | + | 738 | WP_021109520.1 | phage minor tail protein L | - |
| GJV39_RS06225 () | 1186107..1186388 | - | 282 | WP_005714478.1 | HigA family addiction module antidote protein | - |
| GJV39_RS06230 () | 1186400..1186678 | - | 279 | WP_021109519.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GJV39_RS06235 () | 1186749..1187087 | + | 339 | Protein_1195 | Mov34/MPN/PAD-1 family protein | - |
| GJV39_RS06240 () | 1187156..1187632 | + | 477 | WP_005714474.1 | hypothetical protein | - |
| GJV39_RS06245 () | 1187855..1188325 | + | 471 | WP_016527934.1 | YhcH/YjgK/YiaL family protein | - |
| GJV39_RS06250 () | 1188327..1189193 | + | 867 | WP_021109517.1 | MurR/RpiR family transcriptional regulator | - |
| GJV39_RS06255 () | 1189277..1190158 | + | 882 | WP_021109516.1 | N-acetylneuraminate lyase | - |
| GJV39_RS06260 () | 1190222..1191409 | - | 1188 | WP_021109515.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| GJV39_RS06265 () | 1191583..1191858 | - | 276 | WP_035498611.1 | hypothetical protein | - |
| GJV39_RS06270 () | 1192197..1195781 | + | 3585 | WP_051502688.1 | YadA-like family protein | - |
| GJV39_RS06275 () | 1196046..1196219 | + | 174 | Protein_1203 | EamA family transporter | - |
| GJV39_RS06280 () | 1196322..1197512 | - | 1191 | WP_005712565.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| GJV39_RS06285 () | 1197763..1198032 | + | 270 | WP_016527940.1 | antitoxin ChpS | - |
| GJV39_RS06290 () | 1198026..1198388 | + | 363 | WP_026916477.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GJV39_RS06295 () | 1198476..1199366 | + | 891 | WP_010786958.1 | acetyl-CoA carboxylase, carboxyltransferase subunit beta | - |
| GJV39_RS06300 () | 1199366..1200664 | + | 1299 | WP_021109511.1 | bifunctional tetrahydrofolate synthase/dihydrofolate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|