MGE detailed information
MGE type: Prophage MGE length: 65799 bp
Accession: NZ_CP046028 Location: 1842949..1908747 Organism: Staphylococcus chromogenes strain 1401 Replicon: chromosome
Accession: NZ_CP046028 Location: 1842949..1908747 Organism: Staphylococcus chromogenes strain 1401 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJU84_RS08930 () | 1838008..1838445 | - | 438 | WP_151365081.1 | DUF86 domain-containing protein | - |
| GJU84_RS08935 () | 1838543..1838809 | + | 267 | WP_103158895.1 | DUF3055 domain-containing protein | - |
| GJU84_RS08940 () | 1838952..1839704 | - | 753 | WP_165885813.1 | membrane protein insertase YidC | - |
| GJU84_RS08945 () | 1840233..1840598 | - | 366 | WP_145401245.1 | DUF1027 domain-containing protein | - |
| GJU84_RS08950 () | 1840616..1841533 | - | 918 | WP_037572352.1 | lipoyl synthase | - |
| GJU84_RS08955 () | 1841617..1842936 | - | 1320 | WP_165885814.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| GJU84_RS08960 () | 1842949..1843773 | - | 825 | WP_105985895.1 | sulfite exporter TauE/SafE family protein | - |
| GJU84_RS08965 () | 1843789..1844637 | - | 849 | WP_165885815.1 | DUF72 domain-containing protein | - |
| GJU84_RS08970 () | 1844761..1845456 | + | 696 | WP_103158891.1 | alpha/beta fold hydrolase | - |
| GJU84_RS08975 () | 1845548..1846618 | - | 1071 | WP_165885816.1 | nitronate monooxygenase | - |
| GJU84_RS08980 () | 1846760..1847755 | - | 996 | WP_037572362.1 | DUF21 domain-containing protein | - |
| GJU84_RS08985 () | 1848208..1848609 | - | 402 | WP_165885817.1 | hypothetical protein | - |
| GJU84_RS12305 () | 1848601..1848798 | - | 198 | Protein_1740 | hypothetical protein | - |
| GJU84_RS08990 () | 1849195..1849437 | - | 243 | WP_165885818.1 | hypothetical protein | - |
| GJU84_RS08995 () | 1850196..1851653 | - | 1458 | WP_165885819.1 | SH3 domain-containing protein | - |
| GJU84_RS09000 () | 1851643..1852068 | - | 426 | WP_165885820.1 | phage holin | - |
| GJU84_RS09005 () | 1852113..1853426 | - | 1314 | WP_165885821.1 | BppU family phage baseplate upper protein | - |
| GJU84_RS09010 () | 1853442..1855349 | - | 1908 | WP_165885822.1 | Bifunctional autolysin | VF |
| GJU84_RS09015 () | 1855489..1855776 | - | 288 | WP_165885823.1 | DUF2951 family protein | - |
| GJU84_RS09020 () | 1855823..1855960 | - | 138 | WP_165885824.1 | XkdX family protein | - |
| GJU84_RS09025 () | 1855961..1856305 | - | 345 | WP_165885825.1 | hypothetical protein | - |
| GJU84_RS09030 () | 1856307..1857848 | - | 1542 | WP_165885826.1 | BppU family phage baseplate upper protein | - |
| GJU84_RS09035 () | 1857848..1860511 | - | 2664 | WP_165885827.1 | peptidase G2 | - |
| GJU84_RS09040 () | 1860523..1862376 | - | 1854 | WP_165885828.1 | phage tail protein | - |
| GJU84_RS09045 () | 1862388..1863323 | - | 936 | WP_165885829.1 | phage tail family protein | - |
| GJU84_RS09050 () | 1863336..1866272 | - | 2937 | WP_165885830.1 | terminase | - |
| GJU84_RS09055 () | 1866276..1866560 | - | 285 | WP_165885831.1 | hypothetical protein | - |
| GJU84_RS09060 () | 1866605..1867108 | - | 504 | WP_165885832.1 | hypothetical protein | - |
| GJU84_RS09065 () | 1867173..1867715 | - | 543 | WP_165885833.1 | phage major tail protein, TP901-1 family | - |
| GJU84_RS09070 () | 1867719..1868141 | - | 423 | WP_165885834.1 | DUF3168 domain-containing protein | - |
| GJU84_RS09075 () | 1868153..1868560 | - | 408 | WP_165885835.1 | HK97 gp10 family phage protein | - |
| GJU84_RS09080 () | 1868547..1868882 | - | 336 | WP_165885836.1 | phage head closure protein | - |
| GJU84_RS09085 () | 1868893..1869243 | - | 351 | WP_107370744.1 | phage head-tail adapter protein | - |
| GJU84_RS09090 () | 1869249..1869392 | - | 144 | WP_165805170.1 | hypothetical protein | - |
| GJU84_RS09095 () | 1869385..1870320 | - | 936 | WP_165885837.1 | phage major capsid protein | - |
| GJU84_RS09100 () | 1870337..1870921 | - | 585 | WP_165885838.1 | DUF4355 domain-containing protein | - |
| GJU84_RS09105 () | 1871026..1871250 | - | 225 | WP_165885839.1 | hypothetical protein | - |
| GJU84_RS09110 () | 1871252..1872205 | - | 954 | WP_165885840.1 | phage head morphogenesis protein | - |
| GJU84_RS09115 () | 1872168..1873598 | - | 1431 | WP_165885970.1 | phage portal protein | - |
| GJU84_RS09120 () | 1873595..1874818 | - | 1224 | WP_165885841.1 | PBSX family phage terminase large subunit | - |
| GJU84_RS09125 () | 1874811..1875305 | - | 495 | WP_165885842.1 | terminase | - |
| GJU84_RS09130 () | 1875759..1876178 | - | 420 | WP_165885843.1 | transcriptional regulator | - |
| GJU84_RS09135 () | 1876178..1876327 | - | 150 | WP_165885844.1 | hypothetical protein | - |
| GJU84_RS09140 () | 1876449..1876655 | - | 207 | WP_107378810.1 | hypothetical protein | - |
| GJU84_RS09145 () | 1876846..1877349 | - | 504 | WP_107377318.1 | dUTPase | - |
| GJU84_RS09150 () | 1877350..1877709 | - | 360 | WP_165885845.1 | thermonuclease family protein | - |
| GJU84_RS09155 () | 1877696..1878025 | - | 330 | WP_206187644.1 | hypothetical protein | - |
| GJU84_RS09160 () | 1878022..1878420 | - | 399 | WP_165885846.1 | hypothetical protein | - |
| GJU84_RS09165 () | 1878433..1878645 | - | 213 | WP_165885847.1 | hypothetical protein | - |
| GJU84_RS09170 () | 1878645..1878872 | - | 228 | WP_165885972.1 | DUF3310 domain-containing protein | - |
| GJU84_RS09175 () | 1878946..1879137 | - | 192 | WP_105985981.1 | hypothetical protein | - |
| GJU84_RS09180 () | 1879134..1879553 | - | 420 | WP_165885848.1 | hypothetical protein | - |
| GJU84_RS09185 () | 1879555..1879863 | - | 309 | WP_037567959.1 | VRR-NUC domain-containing protein | - |
| GJU84_RS09190 () | 1879860..1880063 | - | 204 | WP_037567961.1 | hypothetical protein | - |
| GJU84_RS09195 () | 1880357..1882675 | - | 2319 | WP_165885849.1 | DNA primase | - |
| GJU84_RS09200 () | 1882707..1883207 | - | 501 | WP_165885850.1 | DUF669 domain-containing protein | - |
| GJU84_RS09205 () | 1883224..1884558 | - | 1335 | WP_165885851.1 | DEAD/DEAH box helicase | - |
| GJU84_RS09210 () | 1884542..1885252 | - | 711 | WP_165885852.1 | AAA family ATPase | - |
| GJU84_RS09215 () | 1885252..1885470 | - | 219 | WP_165885853.1 | DUF2483 family protein | - |
| GJU84_RS09220 () | 1885467..1885733 | - | 267 | WP_157950523.1 | DUF1108 family protein | - |
| GJU84_RS09225 () | 1885815..1885991 | - | 177 | WP_165885854.1 | hypothetical protein | - |
| GJU84_RS09230 () | 1885981..1886160 | - | 180 | WP_107362511.1 | hypothetical protein | - |
| GJU84_RS09235 () | 1886261..1886500 | + | 240 | WP_057510934.1 | hypothetical protein | - |
| GJU84_RS09240 () | 1886490..1886669 | - | 180 | WP_057510935.1 | hypothetical protein | - |
| GJU84_RS09245 () | 1886682..1886927 | - | 246 | WP_107372884.1 | helix-turn-helix domain-containing protein | - |
| GJU84_RS09250 () | 1887119..1887448 | + | 330 | WP_107372887.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| GJU84_RS09255 () | 1887461..1887925 | + | 465 | WP_165885855.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| GJU84_RS09260 () | 1887941..1888477 | + | 537 | WP_165885856.1 | Ltp family lipoprotein | - |
| GJU84_RS09265 () | 1888596..1889111 | + | 516 | WP_165885857.1 | hypothetical protein | - |
| GJU84_RS09270 () | 1889173..1890222 | + | 1050 | WP_165885858.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GJU84_RS09275 () | 1890290..1891687 | - | 1398 | WP_037572364.1 | Fe-S cluster assembly protein SufB | - |
| GJU84_RS09280 () | 1891762..1892211 | - | 450 | WP_037572365.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| GJU84_RS09285 () | 1892201..1893442 | - | 1242 | WP_037573049.1 | cysteine desulfurase | - |
| GJU84_RS09290 () | 1893558..1894865 | - | 1308 | WP_165885859.1 | Fe-S cluster assembly protein SufD | - |
| GJU84_RS09295 () | 1894887..1895657 | - | 771 | WP_037572369.1 | Fe-S cluster assembly ATPase SufC | - |
| GJU84_RS09300 () | 1895961..1896812 | + | 852 | WP_151365144.1 | DUF368 domain-containing protein | - |
| GJU84_RS09305 () | 1897109..1897939 | - | 831 | WP_145401258.1 | Methionine-binding lipoprotein MetQ | VF |
| GJU84_RS09310 () | 1897964..1898659 | - | 696 | WP_037572375.1 | ABC transporter permease | - |
| GJU84_RS09315 () | 1898652..1899680 | - | 1029 | WP_145401260.1 | Methionine import ATP-binding protein MetN 2 | VF |
| GJU84_RS09320 () | 1899919..1900239 | - | 321 | WP_037572379.1 | thioredoxin family protein | - |
| GJU84_RS09325 () | 1900205..1900600 | - | 396 | WP_037572380.1 | toprim domain-containing protein | - |
| GJU84_RS09330 () | 1900683..1901063 | - | 381 | WP_105985886.1 | glycine cleavage system protein GcvH | - |
| GJU84_RS09335 () | 1901134..1901487 | - | 354 | WP_165885860.1 | arsenate reductase family protein | - |
| GJU84_RS09340 () | 1901657..1901977 | + | 321 | WP_145401262.1 | thioredoxin family protein | - |
| GJU84_RS09345 () | 1902069..1902575 | - | 507 | WP_145401264.1 | IS3 family transposase | - |
| GJU84_RS09350 () | 1902569..1902910 | - | 342 | WP_145401266.1 | IS3 family transposase | - |
| GJU84_RS09355 () | 1902919..1903620 | - | 702 | WP_107364330.1 | IS3 family transposase ISSau2 | Transposase |
| GJU84_RS09360 () | 1903718..1904263 | - | 546 | WP_145401268.1 | nitroreductase | - |
| GJU84_RS09365 () | 1904297..1905040 | - | 744 | WP_151365147.1 | type I 3-dehydroquinate dehydratase | - |
| GJU84_RS09370 () | 1905167..1905586 | + | 420 | WP_165885861.1 | organic hydroperoxide resistance protein | - |
| GJU84_RS09375 () | 1905772..1906275 | + | 504 | WP_165885862.1 | GNAT family N-acetyltransferase | - |
| GJU84_RS09380 () | 1906284..1906655 | + | 372 | WP_151365150.1 | DUF1722 domain-containing protein | - |
| GJU84_RS09385 () | 1906783..1908225 | + | 1443 | WP_194747730.1 | MFS transporter | - |
| GJU84_RS09390 () | 1908565..1908747 | - | 183 | WP_151365151.1 | CsbD family protein | - |
| GJU84_RS09395 () | 1908863..1910053 | - | 1191 | WP_151365152.1 | cation:proton antiporter | - |
| GJU84_RS09400 () | 1910316..1910498 | + | 183 | WP_107358621.1 | hypothetical protein | - |
| GJU84_RS09405 () | 1910547..1910777 | + | 231 | WP_145401274.1 | hypothetical protein | - |
| GJU84_RS09415 () | 1911292..1911756 | - | 465 | WP_037572408.1 | SsrA-binding protein SmpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|