MGE detailed information
MGE type: Genomic_island MGE length: 17788 bp
Accession: NZ_CP046025 Location: 3999007..4016794 Organism: Escherichia coli strain C439 Replicon: chromosome
Accession: NZ_CP046025 Location: 3999007..4016794 Organism: Escherichia coli strain C439 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJH08_RS19445 () | 3996004..3996729 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| GJH08_RS19450 () | 3996766..3997305 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| GJH08_RS19455 () | 3997370..3997918 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| GJH08_RS19460 () | 3998400..3999005 | - | 606 | WP_148871294.1 | type 1 fimbria switch DNA invertase FimE | - |
| GJH08_RS19465 () | 3999007..3999704 | - | 698 | Protein_3802 | IS1 family transposase IS1A | Transposase |
| GJH08_RS19470 () | 4000250..4000852 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| GJH08_RS19475 () | 4002308..4003024 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| GJH08_RS19480 () | 4003044..4004150 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| GJH08_RS19485 () | 4004215..4005195 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| GJH08_RS19490 () | 4005778..4007018 | - | 1241 | Protein_3807 | helicase YjhR | - |
| GJH08_RS19495 () | 4007134..4007379 | + | 246 | Protein_3808 | GNAT family N-acetyltransferase | - |
| GJH08_RS19500 () | 4007756..4008013 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| GJH08_RS19505 () | 4008025..4008570 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| GJH08_RS19510 () | 4008626..4009372 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| GJH08_RS19515 () | 4009541..4009759 | + | 219 | Protein_3812 | hypothetical protein | - |
| GJH08_RS19520 () | 4009797..4009913 | + | 117 | Protein_3813 | VOC family protein | - |
| GJH08_RS19525 () | 4010158..4011279 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| GJH08_RS19530 () | 4011276..4011554 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| GJH08_RS19535 () | 4011566..4012879 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| GJH08_RS19540 () | 4012892..4013698 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| GJH08_RS19545 () | 4013829..4014260 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| GJH08_RS19550 () | 4014272..4014904 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| GJH08_RS19555 () | 4014921..4015703 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GJH08_RS19560 () | 4016006..4016794 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| GJH08_RS19565 () | 4016799..4017704 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| GJH08_RS19570 () | 4017715..4019682 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| GJH08_RS19575 () | 4019789..4021138 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|