MGE detailed information
MGE type: Prophage MGE length: 38814 bp
Accession: NZ_CP046025 Location: 3575218..3614031 Organism: Escherichia coli strain C439 Replicon: chromosome
Accession: NZ_CP046025 Location: 3575218..3614031 Organism: Escherichia coli strain C439 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJH08_RS17390 () | 3571061..3574135 | + | 3075 | WP_000177906.1 | beta-galactosidase | - |
| GJH08_RS17395 () | 3574187..3575161 | + | 975 | Protein_3399 | lactose permease | - |
| GJH08_RS17400 () | 3575218..3575915 | + | 698 | Protein_3400 | IS1 family transposase IS1A | Transposase |
| GJH08_RS17405 () | 3575924..3576016 | + | 93 | Protein_3401 | sigma factor-binding protein Crl | - |
| GJH08_RS17410 () | 3576055..3577110 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| GJH08_RS17415 () | 3577398..3578501 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| GJH08_RS17420 () | 3578513..3579766 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| GJH08_RS17430 () | 3580338..3580679 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| GJH08_RS17435 () | 3580700..3581017 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| GJH08_RS17440 () | 3581036..3581257 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| GJH08_RS17445 () | 3581266..3581742 | - | 477 | WP_000811693.1 | RadC family protein | - |
| GJH08_RS17450 () | 3581758..3582216 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| GJH08_RS17455 () | 3582314..3582553 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| GJH08_RS17460 () | 3582630..3583097 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| GJH08_RS17465 () | 3583120..3583563 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| GJH08_RS17470 () | 3583563..3583790 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| GJH08_RS17475 () | 3583786..3583977 | - | 192 | Protein_3414 | DeoR family transcriptional regulator | - |
| GJH08_RS17480 () | 3584194..3585015 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| GJH08_RS17485 () | 3585107..3585970 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| GJH08_RS17490 () | 3586299..3587192 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| GJH08_RS17495 () | 3587288..3587545 | + | 258 | Protein_3418 | IS3 family transposase ISEc52 | Transposase |
| GJH08_RS17500 () | 3587613..3588764 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| GJH08_RS17505 () | 3588774..3589199 | + | 426 | Protein_3420 | IS3 family transposase | - |
| GJH08_RS17510 () | 3589872..3590963 | + | 1092 | Protein_3421 | group II intron reverse transcriptase/maturase | - |
| GJH08_RS17515 () | 3591111..3592127 | - | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| GJH08_RS17520 () | 3592335..3593738 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| GJH08_RS17525 () | 3593725..3594657 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| GJH08_RS17530 () | 3594766..3595812 | - | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| GJH08_RS17535 () | 3595824..3596171 | - | 348 | Protein_3426 | ABC transporter permease subunit | - |
| GJH08_RS17540 () | 3596188..3596885 | - | 698 | Protein_3427 | IS1 family transposase IS1R | Transposase |
| GJH08_RS17545 () | 3596941..3597114 | + | 174 | Protein_3428 | IS30 family transposase | - |
| GJH08_RS17550 () | 3597124..3597372 | - | 249 | Protein_3429 | IS3 family transposase ISEhe3 | Transposase |
| GJH08_RS17555 () | 3597395..3597745 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| GJH08_RS17560 () | 3597839..3598993 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| GJH08_RS17565 () | 3599288..3600196 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| GJH08_RS17570 () | 3600211..3602178 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| GJH08_RS17575 () | 3602405..3603787 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| GJH08_RS17580 () | 3603799..3605409 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| GJH08_RS17585 () | 3605414..3606172 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| GJH08_RS17590 () | 3606311..3607315 | - | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| GJH08_RS17595 () | 3607439..3607642 | + | 204 | Protein_3438 | DUF3987 domain-containing protein | - |
| GJH08_RS17600 () | 3607659..3608356 | - | 698 | Protein_3439 | IS1 family transposase IS1R | Transposase |
| GJH08_RS17605 () | 3608411..3609241 | + | 831 | Protein_3440 | type III restriction endonuclease subunit R | - |
| GJH08_RS17610 () | 3609332..3609958 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| GJH08_RS17615 () | 3610230..3610928 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| GJH08_RS17620 () | 3610955..3611809 | - | 855 | WP_000072039.1 | hypothetical protein | - |
| GJH08_RS17625 () | 3611928..3612152 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| GJH08_RS17630 () | 3612149..3612589 | - | 441 | WP_000224818.1 | hypothetical protein | - |
| GJH08_RS17635 () | 3612706..3614106 | - | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GJH08_RS17640 () | 3614391..3614729 | - | 339 | Protein_3447 | LysR family transcriptional regulator | - |
| GJH08_RS17645 () | 3614780..3615736 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| GJH08_RS17650 () | 3615746..3617944 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| GJH08_RS17655 () | 3617941..3618897 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|