MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 43707 bp
Accession: NZ_CP046020 Location: 1..43707 Organism: Xanthomonas citri pv. malvacearum strain HD-1 Replicon: plasmid unnamed1
Accession: NZ_CP046020 Location: 1..43707 Organism: Xanthomonas citri pv. malvacearum strain HD-1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH913_RS22645 () | 253..648 | + | 396 | WP_005931747.1 | hypothetical protein | - |
| GH913_RS22650 () | 744..1013 | + | 270 | WP_003490597.1 | hypothetical protein | - |
| GH913_RS22655 () | 1010..1303 | + | 294 | WP_005931751.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GH913_RS23325 () | 1416..1559 | + | 144 | WP_195724175.1 | hypothetical protein | - |
| GH913_RS22660 () | 1556..2182 | - | 627 | Protein_5 | IS3 family transposase ISXac2 | Transposase |
| GH913_RS22670 () | 3449..3649 | + | 201 | Protein_7 | IS3 family transposase IS1389-B | Transposase |
| GH913_RS22675 () | 3711..4867 | + | 1157 | WP_089504557.1 | IS3 family transposase ISXc8 | Transposase |
| GH913_RS22680 () | 5047..8643 | - | 3597 | WP_154138584.1 | TAL effector repeat-containing protein | - |
| GH913_RS22685 () | 8860..9480 | + | 621 | WP_089504562.1 | hypothetical protein | - |
| GH913_RS22690 () | 9679..10020 | + | 342 | WP_078566025.1 | hypothetical protein | - |
| GH913_RS22695 () | 10161..11735 | + | 1575 | WP_089504560.1 | type IV secretion system DNA-binding domain-containing protein | - |
| GH913_RS22700 () | 11749..14733 | + | 2985 | WP_089504561.1 | Multifunctional conjugation protein TraI | Relaxase |
| GH913_RS22705 () | 15023..15307 | + | 285 | WP_003490829.1 | hypothetical protein | - |
| GH913_RS22710 () | 15493..15906 | - | 414 | Protein_15 | hypothetical protein | - |
| GH913_RS22720 () | 17397..17633 | - | 237 | WP_015463816.1 | hypothetical protein | - |
| GH913_RS22725 () | 17630..18259 | - | 630 | WP_039583105.1 | AAA family ATPase | - |
| GH913_RS22730 () | 18379..19059 | - | 681 | WP_078565925.1 | DNA-binding protein | - |
| GH913_RS22735 () | 19111..20198 | + | 1088 | WP_089504397.1 | IS3 family transposase ISXac2 | Transposase |
| GH913_RS22740 () | 20595..21650 | - | 1056 | WP_033836455.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| GH913_RS22745 () | 21834..23108 | + | 1275 | WP_005923972.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| GH913_RS22750 () | 23117..26113 | + | 2997 | WP_078566280.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| GH913_RS22755 () | 26161..26580 | - | 420 | Protein_24 | hypothetical protein | - |
| GH913_RS22765 () | 28332..29558 | - | 1227 | WP_089504549.1 | replication protein | - |
| GH913_RS22770 () | 29838..31025 | - | 1188 | WP_078566343.1 | zeta toxin family protein | - |
| GH913_RS22775 () | 31032..31295 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| GH913_RS22780 () | 31320..31721 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GH913_RS22785 () | 31718..31978 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GH913_RS22790 () | 32328..35921 | + | 3594 | WP_095702115.1 | TAL effector repeat-containing protein | - |
| GH913_RS22795 () | 36702..39788 | + | 3087 | WP_154138585.1 | TAL effector repeat-containing protein | - |
| GH913_RS22800 () | 39899..40330 | + | 432 | Protein_33 | avirulence protein | - |
| GH913_RS22805 () | 40421..41698 | - | 1278 | WP_005918469.1 | lytic murein transglycosylase | - |
| GH913_RS22810 () | 41831..43390 | - | 1560 | Protein_35 | Tn3 family transposase TnpA_TnXax1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|