MGE detailed information
MGE type: Genomic_island MGE length: 36312 bp
Accession: NZ_CP046019 Location: 898546..934857 Organism: Xanthomonas citri pv. malvacearum strain HD-1 Replicon: chromosome
Accession: NZ_CP046019 Location: 898546..934857 Organism: Xanthomonas citri pv. malvacearum strain HD-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH913_RS03795 () | 893915..894802 | - | 888 | WP_154138569.1 | lytic transglycosylase domain-containing protein | - |
| GH913_RS03800 () | 894813..895835 | - | 1023 | WP_007968768.1 | P-type DNA transfer ATPase VirB11 | - |
| GH913_RS03805 () | 895846..897066 | - | 1221 | WP_154138452.1 | TrbI/VirB10 family protein | - |
| GH913_RS03810 () | 897068..897850 | - | 783 | WP_017157765.1 | P-type conjugative transfer protein VirB9 | - |
| GH913_RS03815 () | 897875..898549 | - | 675 | WP_007968762.1 | type IV secretion system protein | - |
| GH913_RS03820 () | 898546..899406 | - | 861 | WP_017157767.1 | type IV secretion system protein | - |
| GH913_RS03825 () | 899408..899797 | - | 390 | WP_095702120.1 | hypothetical protein | - |
| GH913_RS03830 () | 899790..900008 | - | 219 | WP_017171754.1 | hypothetical protein | - |
| GH913_RS03835 () | 900055..900723 | - | 669 | WP_154138570.1 | hypothetical protein | - |
| GH913_RS03840 () | 900720..903353 | - | 2634 | WP_154138571.1 | type VI secretion protein | - |
| GH913_RS03845 () | 903376..903675 | - | 300 | WP_007968751.1 | VirB3 family type IV secretion system protein | - |
| GH913_RS03850 () | 903672..904049 | - | 378 | WP_011345609.1 | TrbC/VirB2 family protein | - |
| GH913_RS03855 () | 904078..904359 | - | 282 | WP_041854934.1 | hypothetical protein | - |
| GH913_RS03860 () | 904867..905196 | + | 330 | WP_017159849.1 | hypothetical protein | - |
| GH913_RS03865 () | 905687..906088 | + | 402 | Protein_757 | hypothetical protein | - |
| GH913_RS03870 () | 906201..909485 | - | 3285 | WP_154138453.1 | TAL effector repeat-containing protein | - |
| GH913_RS03875 () | 909947..910288 | - | 342 | WP_078586616.1 | hypothetical protein | - |
| GH913_RS03880 () | 910281..910913 | - | 633 | WP_078565906.1 | ParA family protein | - |
| GH913_RS03885 () | 910979..911272 | - | 294 | Protein_761 | recombinase family protein | - |
| GH913_RS03890 () | 911271..911829 | + | 559 | Protein_762 | DNA-binding protein | - |
| GH913_RS03895 () | 912139..912405 | + | 267 | WP_131701573.1 | hypothetical protein | - |
| GH913_RS03900 () | 912806..913159 | - | 354 | WP_154138454.1 | hypothetical protein | - |
| GH913_RS03905 () | 913208..913888 | - | 681 | WP_154138572.1 | plasmid stabilization protein | - |
| GH913_RS03910 () | 913944..914984 | + | 1041 | WP_033474620.1 | IS21 family transposase | - |
| GH913_RS03915 () | 914984..915784 | + | 801 | WP_017154874.1 | IS21-like element helper ATPase IstB | - |
| GH913_RS03920 () | 915890..916336 | - | 447 | WP_154138455.1 | conjugal transfer protein TraD | - |
| GH913_RS03925 () | 916685..917080 | + | 396 | WP_039447651.1 | hypothetical protein | - |
| GH913_RS23045 () | 917080..917253 | + | 174 | WP_164722239.1 | hypothetical protein | - |
| GH913_RS03930 () | 917257..918831 | + | 1575 | WP_095702034.1 | type IV secretion system DNA-binding domain-containing protein | - |
| GH913_RS03935 () | 918845..921820 | + | 2976 | WP_089504402.1 | conjugative relaxase | - |
| GH913_RS03940 () | 921889..922215 | - | 327 | WP_003491151.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| GH913_RS03945 () | 922212..922430 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| GH913_RS03950 () | 922573..922959 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| GH913_RS03955 () | 923036..923455 | - | 420 | WP_078566256.1 | hypothetical protein | - |
| GH913_RS03960 () | 923581..924450 | - | 870 | WP_078566255.1 | transglycosylase SLT domain-containing protein | - |
| GH913_RS03965 () | 924461..925483 | - | 1023 | WP_154138456.1 | P-type DNA transfer ATPase VirB11 | - |
| GH913_RS03970 () | 925494..926714 | - | 1221 | WP_154138457.1 | TrbI/VirB10 family protein | - |
| GH913_RS03975 () | 926716..927498 | - | 783 | WP_017157765.1 | P-type conjugative transfer protein VirB9 | - |
| GH913_RS03980 () | 927523..928197 | - | 675 | WP_007968762.1 | type IV secretion system protein | - |
| GH913_RS03985 () | 928194..929060 | - | 867 | WP_017161285.1 | type IV secretion system protein | - |
| GH913_RS03990 () | 929048..929455 | - | 408 | WP_017161284.1 | hypothetical protein | - |
| GH913_RS03995 () | 929448..929663 | - | 216 | WP_017161283.1 | hypothetical protein | - |
| GH913_RS04000 () | 929714..930379 | - | 666 | WP_154138458.1 | hypothetical protein | - |
| GH913_RS04005 () | 930376..933009 | - | 2634 | WP_154138459.1 | type VI secretion protein | - |
| GH913_RS04010 () | 933032..933331 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| GH913_RS04015 () | 933328..933705 | - | 378 | WP_154138460.1 | TrbC/VirB2 family protein | - |
| GH913_RS04020 () | 933726..934016 | - | 291 | WP_154138573.1 | MobD protein | - |
| GH913_RS04025 () | 934528..934857 | + | 330 | WP_017159849.1 | hypothetical protein | - |
| GH913_RS04030 () | 935352..935666 | + | 315 | Protein_791 | hypothetical protein | - |
| GH913_RS04035 () | 935918..939406 | + | 3489 | WP_089504401.1 | TAL effector repeat-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|