MGE detailed information
MGE type: IScluster/Tn MGE length: 12239 bp
Accession: NZ_CP046019 Location: 4081427..4093665 Organism: Xanthomonas citri pv. malvacearum strain HD-1 Replicon: chromosome
Accession: NZ_CP046019 Location: 4081427..4093665 Organism: Xanthomonas citri pv. malvacearum strain HD-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH913_RS17765 () | 4076621..4076797 | - | 177 | WP_033836587.1 | DUF3606 domain-containing protein | - |
| GH913_RS17770 () | 4077017..4077418 | + | 402 | WP_005913011.1 | H-NS histone family protein | - |
| GH913_RS17780 () | 4077706..4078797 | + | 1092 | WP_033836588.1 | site-specific integrase | - |
| GH913_RS17785 () | 4079698..4081365 | + | 1668 | Protein_3480 | DotA/TraY family protein | - |
| GH913_RS17790 () | 4081427..4082583 | + | 1157 | WP_087942126.1 | IS3-like element ISXc8 family transposase | - |
| GH913_RS17795 () | 4082588..4082830 | - | 243 | Protein_3482 | IS3 family transposase | - |
| GH913_RS17800 () | 4083083..4083946 | + | 864 | Protein_3483 | TAL effector repeat-containing protein | - |
| GH913_RS17810 () | 4085272..4087275 | + | 2004 | Protein_3485 | TAL effector repeat-containing protein | - |
| GH913_RS17815 () | 4087387..4087922 | - | 536 | Protein_3486 | transposase | - |
| GH913_RS17820 () | 4088135..4088314 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| GH913_RS17825 () | 4088585..4088905 | - | 321 | WP_099522003.1 | hypothetical protein | - |
| GH913_RS17830 () | 4088902..4089192 | - | 291 | WP_033836591.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GH913_RS17835 () | 4089180..4089458 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| GH913_RS23265 () | 4089539..4089971 | - | 433 | Protein_3491 | relaxase | - |
| GH913_RS17840 () | 4089943..4090104 | - | 162 | WP_108350140.1 | hypothetical protein | - |
| GH913_RS17845 () | 4090180..4091336 | + | 1157 | WP_089504557.1 | IS3 family transposase | - |
| GH913_RS17850 () | 4091840..4092055 | + | 216 | Protein_3494 | SAM-dependent DNA methyltransferase | - |
| GH913_RS17855 () | 4092578..4093665 | + | 1088 | WP_089504397.1 | IS3-like element ISXac2 family transposase | - |
| GH913_RS23270 () | 4093752..4093919 | + | 168 | WP_005913009.1 | hypothetical protein | - |
| GH913_RS17860 () | 4094211..4095317 | + | 1107 | WP_179119000.1 | diguanylate cyclase | - |
| GH913_RS17865 () | 4095360..4095869 | - | 510 | WP_003485975.1 | chemotaxis protein CheW | - |
| GH913_RS17870 () | 4095881..4097539 | - | 1659 | WP_078566317.1 | MCP four helix bundle domain-containing protein | - |
| GH913_RS17875 () | 4097850..4098455 | + | 606 | WP_179119001.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|