MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 114129 bp
Accession: NZ_CP046008 Location: 1..114129 Organism: Escherichia coli strain 1919D62 Replicon: plasmid p1919D62-2
Accession: NZ_CP046008 Location: 1..114129 Organism: Escherichia coli strain 1919D62 Replicon: plasmid p1919D62-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD96_RS01060 () | 1..4572 | + | 4572 | WP_124884814.1 | tape measure protein | - |
| GJD96_RS01065 () | 4615..4950 | + | 336 | WP_000442113.1 | phage tail protein | - |
| GJD96_RS01070 () | 5033..5731 | + | 699 | WP_166494251.1 | phage minor tail protein L | - |
| GJD96_RS01075 () | 5724..6521 | + | 798 | WP_124884812.1 | C40 family peptidase | - |
| GJD96_RS01080 () | 6509..7102 | + | 594 | WP_064674264.1 | tail assembly protein | - |
| GJD96_RS01085 () | 7113..11693 | + | 4581 | WP_124884811.1 | DUF1983 domain-containing protein | - |
| GJD96_RS01090 () | 11829..13853 | + | 2025 | Protein_6 | tail fiber protein | - |
| GJD96_RS01095 () | 14103..15218 | + | 1116 | WP_124884819.1 | tail fiber domain-containing protein | - |
| GJD96_RS01100 () | 15281..16066 | + | 786 | WP_096098950.1 | receptor-recognizing protein | - |
| GJD96_RS01105 () | 16141..16464 | + | 324 | WP_001711185.1 | hypothetical protein | - |
| GJD96_RS01110 () | 16478..17170 | + | 693 | WP_033546097.1 | membrane protein | - |
| GJD96_RS01115 () | 17173..17424 | + | 252 | WP_023135660.1 | hypothetical protein | - |
| GJD96_RS01120 () | 17593..18114 | - | 522 | WP_033870689.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GJD96_RS01125 () | 18122..18391 | - | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GJD96_RS01130 () | 18711..19379 | + | 669 | WP_000161228.1 | AAA family ATPase | - |
| GJD96_RS01135 () | 19385..19738 | + | 354 | WP_160378290.1 | hypothetical protein | - |
| GJD96_RS01140 () | 19791..20558 | - | 768 | WP_033870691.1 | hypothetical protein | - |
| GJD96_RS01145 () | 20841..21566 | + | 726 | WP_023135656.1 | hypothetical protein | - |
| GJD96_RS01150 () | 21627..22967 | + | 1341 | WP_063122790.1 | AAA family ATPase | - |
| GJD96_RS01155 () | 23124..24239 | + | 1116 | WP_166494254.1 | DNA primase | - |
| GJD96_RS01160 () | 24271..24381 | - | 111 | Protein_20 | IS5/IS1182 family transposase | - |
| GJD96_RS01165 () | 24414..24773 | - | 360 | Protein_21 | ABC transporter ATP-binding protein/permease | - |
| GJD96_RS01170 () | 24976..25098 | + | 123 | WP_122633168.1 | hypothetical protein | - |
| GJD96_RS01175 () | 25064..26221 | - | 1158 | WP_154166893.1 | anaerobic sulfatase maturase | - |
| GJD96_RS01180 () | 26273..27955 | - | 1683 | WP_001515303.1 | sulfatase | - |
| GJD96_RS01185 () | 28089..28244 | + | 156 | Protein_25 | IS5/IS1182 family transposase | - |
| GJD96_RS01190 () | 28257..29465 | - | 1209 | WP_001352368.1 | IS4-like element ISVsa5 family transposase | - |
| GJD96_RS01195 () | 29568..30395 | + | 828 | Protein_27 | IS5 family transposase | - |
| GJD96_RS01200 () | 30451..30549 | + | 99 | Protein_28 | transposase | - |
| GJD96_RS01205 () | 30651..31355 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| GJD96_RS01210 () | 31420..31623 | - | 204 | Protein_30 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| GJD96_RS01215 () | 31762..32529 | - | 768 | WP_032319018.1 | thiosulfate reductase cytochrome B subunit | - |
| GJD96_RS01220 () | 32526..33104 | - | 579 | WP_016153548.1 | thiosulfate reductase electron transport protein PhsB | - |
| GJD96_RS01225 () | 33119..35392 | - | 2274 | WP_032319017.1 | thiosulfate reductase PhsA | - |
| GJD96_RS01230 () | 35575..36272 | + | 698 | Protein_34 | IS1 family transposase | - |
| GJD96_RS01235 () | 36386..36934 | + | 549 | WP_072662626.1 | hypothetical protein | - |
| GJD96_RS01240 () | 36925..37341 | + | 417 | WP_032271783.1 | type II toxin-antitoxin system YafO family toxin | - |
| GJD96_RS01245 () | 37641..38744 | + | 1104 | WP_003980691.1 | site-specific integrase | - |
| GJD96_RS01250 () | 38739..39128 | - | 390 | WP_023135736.1 | hypothetical protein | - |
| GJD96_RS01255 () | 39384..39596 | + | 213 | WP_024172742.1 | hypothetical protein | - |
| GJD96_RS01260 () | 39710..41941 | + | 2232 | WP_154166890.1 | porphyrin biosynthesis protein | - |
| GJD96_RS01265 () | 42037..43272 | + | 1236 | WP_063085645.1 | AAA family ATPase | - |
| GJD96_RS01270 () | 43453..46971 | + | 3519 | WP_152922663.1 | DNA polymerase III subunit alpha | - |
| GJD96_RS01280 () | 47669..48100 | + | 432 | WP_053292493.1 | hypothetical protein | - |
| GJD96_RS01285 () | 48220..49236 | + | 1017 | WP_063078632.1 | hypothetical protein | - |
| GJD96_RS01290 () | 49297..50241 | + | 945 | WP_087905091.1 | exonuclease | - |
| GJD96_RS01295 () | 50241..50507 | + | 267 | WP_052930801.1 | hypothetical protein | - |
| GJD96_RS01300 () | 50510..52849 | + | 2340 | WP_154166891.1 | recombinase RecA | - |
| GJD96_RS01305 () | 53151..56228 | - | 3078 | WP_104730527.1 | DEAD/DEAH box helicase family protein | - |
| GJD96_RS01310 () | 56238..58082 | - | 1845 | WP_104730528.1 | site-specific DNA-methyltransferase | - |
| GJD96_RS01315 () | 58157..58843 | - | 687 | WP_023315979.1 | DUF4391 domain-containing protein | - |
| GJD96_RS01320 () | 58847..62179 | - | 3333 | WP_064674285.1 | DEAD/DEAH box helicase family protein | - |
| GJD96_RS01330 () | 62688..62963 | + | 276 | WP_023135696.1 | hypothetical protein | - |
| GJD96_RS01335 () | 63003..63182 | + | 180 | WP_023135695.1 | hypothetical protein | - |
| GJD96_RS01340 () | 63179..63514 | + | 336 | WP_023135694.1 | hypothetical protein | - |
| GJD96_RS01345 () | 63514..63726 | + | 213 | WP_063122723.1 | hypothetical protein | - |
| GJD96_RS01350 () | 64336..65391 | - | 1056 | WP_001711119.1 | replication protein RepA | - |
| GJD96_RS01355 () | 66134..66778 | + | 645 | WP_023135693.1 | hypothetical protein | - |
| GJD96_RS01360 () | 67175..68260 | + | 1086 | WP_032187693.1 | metallophosphoesterase | - |
| GJD96_RS01365 () | 68490..70406 | + | 1917 | WP_032187695.1 | AAA family ATPase | - |
| GJD96_RS01370 () | 70396..71142 | + | 747 | WP_124884828.1 | hypothetical protein | - |
| GJD96_RS01375 () | 71118..71894 | + | 777 | WP_063091564.1 | hypothetical protein | - |
| GJD96_RS01380 () | 71891..72460 | + | 570 | WP_025670519.1 | hypothetical protein | - |
| GJD96_RS01385 () | 72726..73604 | + | 879 | WP_032187593.1 | phosphoribosyl-ATP pyrophosphohydrolase | - |
| GJD96_RS01390 () | 73784..74887 | + | 1104 | WP_033546603.1 | thymidylate synthase | - |
| GJD96_RS01395 () | 74907..75302 | + | 396 | WP_160956520.1 | hypothetical protein | - |
| GJD96_RS01400 () | 75305..75775 | + | 471 | WP_166494814.1 | dihydrofolate reductase | - |
| GJD96_RS01405 () | 75775..76419 | + | 645 | WP_053292503.1 | AAA family ATPase | - |
| GJD96_RS01410 () | 76483..76902 | + | 420 | WP_025670513.1 | hypothetical protein | - |
| GJD96_RS01415 () | 76912..77466 | + | 555 | WP_097476179.1 | 3'-5' exonuclease | - |
| GJD96_RS01420 () | 77595..78467 | + | 873 | WP_166429098.1 | hypothetical protein | - |
| GJD96_RS01425 () | 78623..79216 | + | 594 | WP_063085663.1 | phage N-6-adenine-methyltransferase | - |
| GJD96_RS01430 () | 79419..79649 | + | 231 | WP_025670509.1 | hypothetical protein | - |
| GJD96_RS01435 () | 80243..80851 | + | 609 | WP_063085666.1 | ribonuclease HI | - |
| GJD96_RS01440 () | 80994..81494 | + | 501 | WP_032187601.1 | hypothetical protein | - |
| GJD96_RS01445 () | 81504..81692 | + | 189 | WP_032187602.1 | hypothetical protein | - |
| GJD96_RS01450 () | 81799..82614 | + | 816 | WP_063085673.1 | Rha family transcriptional regulator | - |
| GJD96_RS01455 () | 82723..83295 | + | 573 | WP_089075297.1 | hypothetical protein | - |
| GJD96_RS01460 () | 83536..84516 | + | 981 | WP_000019440.1 | IS5-like element ISKpn26 family transposase | - |
| GJD96_RS01465 () | 84995..88777 | + | 3783 | WP_154166895.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| GJD96_RS01470 () | 88885..89582 | - | 698 | Protein_80 | IS1 family transposase | - |
| GJD96_RS01475 () | 91273..91488 | + | 216 | WP_162521988.1 | hypothetical protein | - |
| GJD96_RS01480 () | 91628..91957 | + | 330 | WP_032187826.1 | hypothetical protein | - |
| GJD96_RS01485 () | 92118..92429 | + | 312 | WP_001711135.1 | hypothetical protein | - |
| GJD96_RS01490 () | 92551..92946 | + | 396 | WP_033546623.1 | hypothetical protein | - |
| GJD96_RS01495 () | 93064..93438 | + | 375 | WP_074014865.1 | hypothetical protein | - |
| GJD96_RS01500 () | 93774..94055 | + | 282 | WP_001711139.1 | hypothetical protein | - |
| GJD96_RS01505 () | 94260..94742 | + | 483 | WP_063122769.1 | hypothetical protein | - |
| GJD96_RS01510 () | 95361..95591 | - | 231 | WP_001711144.1 | hypothetical protein | - |
| GJD96_RS01515 () | 95642..96292 | - | 651 | WP_124062459.1 | hypothetical protein | - |
| GJD96_RS01520 () | 96607..97131 | - | 525 | WP_033870681.1 | transcriptional regulator | - |
| GJD96_RS01525 () | 97131..97721 | - | 591 | Protein_91 | hypothetical protein | - |
| GJD96_RS01530 () | 98020..98556 | - | 537 | WP_089075223.1 | hypothetical protein | - |
| GJD96_RS01535 () | 98622..98900 | - | 279 | WP_089075224.1 | hypothetical protein | - |
| GJD96_RS01540 () | 98903..100462 | - | 1560 | WP_124062460.1 | DEAD/DEAH box helicase | - |
| GJD96_RS01545 () | 100527..101225 | + | 699 | WP_089075226.1 | ParB N-terminal domain-containing protein | - |
| GJD96_RS01550 () | 101225..101893 | + | 669 | WP_000164561.1 | ParB/Srx family N-terminal domain-containing protein | - |
| GJD96_RS01555 () | 101890..102528 | + | 639 | WP_016051719.1 | ATP-binding cassette domain-containing protein | - |
| GJD96_RS01560 () | 102521..102775 | + | 255 | WP_089075227.1 | hypothetical protein | - |
| GJD96_RS01565 () | 102781..103671 | + | 891 | WP_152918843.1 | hypothetical protein | - |
| GJD96_RS01570 () | 103681..103947 | + | 267 | WP_000176291.1 | hypothetical protein | - |
| GJD96_RS01575 () | 104143..104784 | + | 642 | WP_022649943.1 | hypothetical protein | - |
| GJD96_RS01580 () | 104787..106043 | + | 1257 | WP_124062461.1 | phage terminase large subunit | - |
| GJD96_RS01585 () | 106077..107651 | + | 1575 | WP_124884816.1 | hypothetical protein | - |
| GJD96_RS01590 () | 107674..108567 | + | 894 | WP_063122778.1 | hypothetical protein | - |
| GJD96_RS01595 () | 108594..109469 | + | 876 | WP_032187309.1 | hypothetical protein | - |
| GJD96_RS01600 () | 109544..109972 | + | 429 | WP_063085588.1 | Ig-like domain-containing protein | - |
| GJD96_RS01605 () | 110016..110450 | + | 435 | WP_063122779.1 | hypothetical protein | - |
| GJD96_RS01610 () | 110450..111283 | + | 834 | WP_122224849.1 | hypothetical protein | - |
| GJD96_RS01615 () | 111381..111725 | + | 345 | WP_053292521.1 | hypothetical protein | - |
| GJD96_RS01620 () | 111716..112189 | + | 474 | WP_124884815.1 | hypothetical protein | - |
| GJD96_RS01625 () | 112191..112574 | + | 384 | WP_124831680.1 | minor capsid protein | - |
| GJD96_RS01630 () | 112649..113395 | + | 747 | WP_032187301.1 | Ig domain-containing protein | - |
| GJD96_RS01635 () | 113455..113772 | + | 318 | WP_000163862.1 | hypothetical protein | - |
| GJD96_RS01640 () | 113898..114122 | + | 225 | WP_000952684.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|