MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59351 bp
Accession: NZ_CP046002 Location: 1..59351 Organism: Escherichia coli strain 1916D6 Replicon: plasmid p1916D6-2
Accession: NZ_CP046002 Location: 1..59351 Organism: Escherichia coli strain 1916D6 Replicon: plasmid p1916D6-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD94_RS00400 () | 1..450 | + | 450 | WP_001282381.1 | H-NS histone family protein | - |
| GJD94_RS00405 () | 513..917 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| GJD94_RS00410 () | 1112..1816 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJD94_RS00415 () | 1880..2122 | + | 243 | Protein_3 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| GJD94_RS00420 () | 2126..5158 | + | 3033 | WP_124354296.1 | Tn3 family transposase ISPsy42 | Transposase |
| GJD94_RS00425 () | 5182..5796 | - | 615 | Protein_5 | IS6 family transposase | - |
| GJD94_RS00430 () | 5860..6300 | + | 441 | Protein_6 | MFS transporter | - |
| GJD94_RS00435 () | 6300..6884 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| GJD94_RS00440 () | 7377..8141 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| GJD94_RS23600 () | 8259..8324 | - | 66 | Protein_9 | EAL domain-containing protein | - |
| GJD94_RS00445 () | 8478..10055 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| GJD94_RS00450 () | 10383..11144 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GJD94_RS00455 () | 11165..12025 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| GJD94_RS00460 () | 12162..12866 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJD94_RS00465 () | 12918..13244 | - | 327 | Protein_14 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GJD94_RS00470 () | 13672..15231 | + | 1560 | WP_103859199.1 | putative ABC transporter ATP-binding protein YheS | VF |
| GJD94_RS00475 () | 15320..15901 | + | 582 | Protein_16 | Tn3 family transposase | - |
| GJD94_RS00480 () | 15959..16201 | + | 243 | WP_000844627.1 | transposase | - |
| GJD94_RS00485 () | 16233..16868 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GJD94_RS00490 () | 16974..18173 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| GJD94_RS00495 () | 18140..18328 | - | 189 | Protein_20 | IS91 family transposase | - |
| GJD94_RS00500 () | 18440..18745 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GJD94_RS00505 () | 18773..19987 | - | 1215 | WP_034167813.1 | Inner membrane transport protein YdhC | ARG |
| GJD94_RS00510 () | 20204..21088 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| GJD94_RS00515 () | 21119..22612 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GJD94_RS00520 () | 22951..24108 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| GJD94_RS00525 () | 24098..24943 | - | 846 | WP_164538741.1 | alpha/beta fold hydrolase | - |
| GJD94_RS00530 () | 25288..25992 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GJD94_RS00535 () | 26004..26816 | - | 813 | WP_065799592.1 | hypothetical protein | ARG |
| GJD94_RS00540 () | 26948..27739 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GJD94_RS00545 () | 27885..28487 | + | 603 | Protein_30 | IS91 family transposase ISAzo26 | Transposase |
| GJD94_RS00550 () | 28540..29244 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GJD94_RS00555 () | 29309..29836 | + | 528 | Protein_32 | Tn3 family transposase | - |
| GJD94_RS00560 () | 30042..30680 | - | 639 | WP_024245155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GJD94_RS00565 () | 30966..31586 | + | 621 | WP_000864791.1 | ParA family protein | - |
| GJD94_RS00570 () | 31638..31868 | + | 231 | WP_000051064.1 | partitioning protein | - |
| GJD94_RS00575 () | 31884..32177 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| GJD94_RS00580 () | 32179..33147 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| GJD94_RS00585 () | 33207..33629 | - | 423 | WP_195686758.1 | DNA distortion polypeptide 3 | - |
| GJD94_RS00590 () | 33697..34143 | - | 447 | Protein_39 | hypothetical protein | - |
| GJD94_RS00595 () | 34183..35019 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| GJD94_RS00600 () | 36275..36526 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| GJD94_RS00605 () | 36516..36797 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJD94_RS00610 () | 36943..37266 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| GJD94_RS00615 () | 37311..37556 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| GJD94_RS00620 () | 37546..37761 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| GJD94_RS00625 () | 37854..38183 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| GJD94_RS23605 () | 38470..38619 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| GJD94_RS00630 () | 38632..38904 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| GJD94_RS00635 () | 39231..39776 | + | 546 | WP_038976855.1 | hypothetical protein | - |
| GJD94_RS00640 () | 39779..40936 | + | 1158 | WP_000538023.1 | hypothetical protein | - |
| GJD94_RS00645 () | 41297..41788 | + | 492 | WP_000872475.1 | transcription termination factor NusG | - |
| GJD94_RS00650 () | 42013..42657 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| GJD94_RS00655 () | 42641..42931 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| GJD94_RS00660 () | 42955..45714 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| GJD94_RS00665 () | 45716..46453 | + | 738 | WP_000737859.1 | pilus assembly protein | - |
| GJD94_RS00670 () | 46463..46723 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| GJD94_RS00675 () | 46735..47790 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| GJD94_RS00680 () | 47980..48702 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| GJD94_RS00685 () | 48708..49637 | + | 930 | WP_025755764.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| GJD94_RS00690 () | 49634..50848 | + | 1215 | WP_025755765.1 | Type IV secretion system protein virB10 | VF |
| GJD94_RS00695 () | 50866..51576 | + | 711 | WP_154139455.1 | Type IV secretion system protein PtlH | VF |
| GJD94_RS00700 () | 51582..52795 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD94_RS00705 () | 52836..53216 | + | 381 | Protein_63 | Type IV secretion system protein PtlH | VF |
| GJD94_RS00710 () | 53221..55056 | + | 1836 | WP_025755766.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GJD94_RS00715 () | 55053..55448 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| GJD94_RS00720 () | 55574..55783 | + | 210 | WP_024256774.1 | hypothetical protein | - |
| GJD94_RS00725 () | 55866..56336 | + | 471 | WP_025755767.1 | thermonuclease family protein | - |
| GJD94_RS00730 () | 56751..56996 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| GJD94_RS00735 () | 57016..59340 | + | 2325 | WP_025755768.1 | type IA DNA topoisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|