MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59353 bp
Accession: NZ_CP045998 Location: 1..59353 Organism: Escherichia coli strain 1916D18 Replicon: plasmid p1916D18-1
Accession: NZ_CP045998 Location: 1..59353 Organism: Escherichia coli strain 1916D18 Replicon: plasmid p1916D18-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD92_RS00005 () | 1..450 | + | 450 | WP_001282381.1 | H-NS histone family protein | - |
| GJD92_RS00010 () | 513..917 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| GJD92_RS00015 () | 1112..1816 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJD92_RS00020 () | 1880..2122 | + | 243 | Protein_3 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| GJD92_RS00025 () | 2126..5158 | + | 3033 | WP_124354296.1 | Tn3 family transposase ISPsy42 | Transposase |
| GJD92_RS00030 () | 5182..5796 | - | 615 | Protein_5 | IS6 family transposase | - |
| GJD92_RS00035 () | 5860..6300 | + | 441 | Protein_6 | MFS transporter | - |
| GJD92_RS00040 () | 6300..6884 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| GJD92_RS00045 () | 7377..8141 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| GJD92_RS23865 () | 8259..8324 | - | 66 | Protein_9 | EAL domain-containing protein | - |
| GJD92_RS00050 () | 8478..10055 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| GJD92_RS00055 () | 10383..11144 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GJD92_RS00060 () | 11165..12025 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| GJD92_RS00065 () | 12162..12866 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJD92_RS00070 () | 12918..13244 | - | 327 | Protein_14 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GJD92_RS00075 () | 13672..15231 | + | 1560 | WP_103859199.1 | putative ABC transporter ATP-binding protein YheS | VF |
| GJD92_RS00080 () | 15320..15901 | + | 582 | Protein_16 | Tn3 family transposase | - |
| GJD92_RS00085 () | 15959..16201 | + | 243 | WP_000844627.1 | transposase | - |
| GJD92_RS00090 () | 16233..16868 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GJD92_RS00095 () | 16974..18173 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| GJD92_RS00100 () | 18140..18328 | - | 189 | Protein_20 | IS91 family transposase | - |
| GJD92_RS00105 () | 18440..18745 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GJD92_RS00110 () | 18773..19987 | - | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| GJD92_RS00115 () | 20204..21088 | - | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| GJD92_RS00120 () | 21119..22612 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GJD92_RS00125 () | 22951..24108 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| GJD92_RS00130 () | 24098..25015 | - | 918 | WP_094309312.1 | alpha/beta fold hydrolase | - |
| GJD92_RS00135 () | 25290..25994 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GJD92_RS00140 () | 26006..26818 | - | 813 | WP_065799592.1 | hypothetical protein | ARG |
| GJD92_RS00145 () | 26950..27741 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GJD92_RS00150 () | 27887..28489 | + | 603 | Protein_30 | IS91 family transposase ISAzo26 | Transposase |
| GJD92_RS00155 () | 28542..29246 | - | 705 | WP_033545665.1 | IS6 family transposase IS26 | Transposase |
| GJD92_RS00160 () | 29311..29838 | + | 528 | Protein_32 | Tn3 family transposase | - |
| GJD92_RS00165 () | 30044..30682 | - | 639 | WP_024245155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GJD92_RS00170 () | 30968..31588 | + | 621 | WP_000864791.1 | ParA family protein | - |
| GJD92_RS00175 () | 31640..31870 | + | 231 | WP_000051064.1 | partitioning protein | - |
| GJD92_RS00180 () | 31886..32179 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| GJD92_RS00185 () | 32181..33149 | + | 969 | WP_195714615.1 | IS5 family transposase IS903B | Transposase |
| GJD92_RS00190 () | 33209..33631 | - | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| GJD92_RS00195 () | 33699..34145 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| GJD92_RS00200 () | 34185..35021 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| GJD92_RS00205 () | 36277..36528 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| GJD92_RS00210 () | 36518..36799 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJD92_RS00215 () | 36945..37268 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| GJD92_RS00220 () | 37313..37558 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| GJD92_RS00225 () | 37548..37763 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| GJD92_RS00230 () | 37856..38185 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| GJD92_RS23870 () | 38472..38621 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| GJD92_RS00235 () | 38634..38906 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| GJD92_RS00240 () | 39233..39778 | + | 546 | WP_038976855.1 | hypothetical protein | - |
| GJD92_RS00245 () | 39781..40938 | + | 1158 | WP_000538023.1 | hypothetical protein | - |
| GJD92_RS00250 () | 41299..41790 | + | 492 | WP_000872475.1 | transcription termination factor NusG | - |
| GJD92_RS00255 () | 42015..42659 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| GJD92_RS00260 () | 42643..42933 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| GJD92_RS00265 () | 42957..45716 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| GJD92_RS00270 () | 45718..46455 | + | 738 | WP_000737859.1 | pilus assembly protein | - |
| GJD92_RS00275 () | 46465..46725 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| GJD92_RS00280 () | 46737..47792 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| GJD92_RS00285 () | 47982..48704 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| GJD92_RS00290 () | 48710..49639 | + | 930 | WP_025755764.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| GJD92_RS00295 () | 49636..50850 | + | 1215 | WP_025755765.1 | Type IV secretion system protein virB10 | VF |
| GJD92_RS00300 () | 50868..51578 | + | 711 | WP_154139455.1 | Type IV secretion system protein PtlH | VF |
| GJD92_RS00305 () | 51584..52797 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD92_RS00310 () | 52838..53218 | + | 381 | Protein_63 | Type IV secretion system protein PtlH | VF |
| GJD92_RS00315 () | 53223..55058 | + | 1836 | WP_025755766.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GJD92_RS00320 () | 55055..55450 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| GJD92_RS00325 () | 55576..55785 | + | 210 | WP_024256774.1 | hypothetical protein | - |
| GJD92_RS00330 () | 55868..56338 | + | 471 | WP_025755767.1 | thermonuclease family protein | - |
| GJD92_RS00335 () | 56753..56998 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| GJD92_RS00340 () | 57018..59342 | + | 2325 | WP_025755768.1 | type IA DNA topoisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|