MGE detailed information
MGE type: Prophage MGE length: 51760 bp
Accession: NZ_CP045977 Location: 4369322..4421081 Organism: Escherichia coli strain INSC1002 Replicon: chromosome
Accession: NZ_CP045977 Location: 4369322..4421081 Organism: Escherichia coli strain INSC1002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GI529_RS20990 () | 4364404..4364847 | - | 444 | WP_000786393.1 | DNA polymerase III subunit chi | - |
| GI529_RS20995 () | 4365201..4366712 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| GI529_RS21000 () | 4366979..4368079 | + | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| GI529_RS21005 () | 4368079..4369161 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| GI529_RS21010 () | 4369322..4370824 | - | 1503 | WP_001294573.1 | DUF853 domain-containing protein | - |
| GI529_RS21015 () | 4370902..4371900 | - | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| GI529_RS21020 () | 4371967..4373286 | - | 1320 | WP_001128347.1 | gnt-II system L-idonate transporter | - |
| GI529_RS21025 () | 4373349..4374113 | - | 765 | WP_000998695.1 | hypothetical protein | VF |
| GI529_RS21030 () | 4374137..4375168 | - | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| GI529_RS21035 () | 4375385..4375948 | + | 564 | WP_000896738.1 | gluconokinase | - |
| GI529_RS21040 () | 4375952..4376971 | - | 1020 | WP_001318460.1 | NADPH-dependent aldehyde reductase Ahr | - |
| GI529_RS21050 () | 4377437..4378702 | + | 1266 | Protein_4087 | hypothetical protein ; Integrase | Integrase |
| GI529_RS21055 () | 4379019..4380199 | - | 1181 | Protein_4088 | phosphoethanolamine transferase | - |
| GI529_RS21060 () | 4380786..4381015 | + | 230 | Protein_4089 | transposase domain-containing protein | - |
| GI529_RS21065 () | 4381529..4382875 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| GI529_RS21070 () | 4383484..4384701 | + | 1218 | WP_000179691.1 | MFS transporter | - |
| GI529_RS21075 () | 4384713..4385831 | + | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| GI529_RS21080 () | 4385874..4385999 | + | 126 | WP_000594405.1 | hypothetical protein | - |
| GI529_RS21085 () | 4386052..4386309 | - | 258 | WP_000254999.1 | hypothetical protein | - |
| GI529_RS21090 () | 4386299..4386535 | + | 237 | Protein_4095 | MFS transporter | - |
| GI529_RS21095 () | 4386623..4387790 | + | 1168 | WP_085948656.1 | IS3 family transposase ISLad1 | Transposase |
| GI529_RS21100 () | 4387725..4388138 | - | 414 | WP_000625671.1 | DUF2254 domain-containing protein | - |
| GI529_RS21105 () | 4388201..4390198 | - | 1998 | WP_001293436.1 | choline BCCT transporter BetT | - |
| GI529_RS21115 () | 4391575..4392359 | + | 785 | Protein_4100 | IS3 family transposase ISEc52 | Transposase |
| GI529_RS21120 () | 4392442..4392699 | + | 258 | WP_000177057.1 | hypothetical protein | - |
| GI529_RS21125 () | 4393256..4394023 | - | 768 | WP_000175457.1 | hypothetical protein | VF |
| GI529_RS21130 () | 4394024..4394980 | - | 957 | WP_000684856.1 | hypothetical protein | VF |
| GI529_RS21135 () | 4394977..4395975 | - | 999 | WP_000125187.1 | hypothetical protein | VF |
| GI529_RS21140 () | 4395972..4396874 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| GI529_RS21145 () | 4396919..4399243 | - | 2325 | WP_000188262.1 | Fe(3+) dicitrate transport protein FecA | - |
| GI529_RS21150 () | 4399330..4400283 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| GI529_RS21155 () | 4400280..4400801 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| GI529_RS21160 () | 4401093..4401790 | + | 698 | Protein_4109 | IS1 family transposase | - |
| GI529_RS21165 () | 4401810..4401875 | - | 66 | Protein_4110 | omptin family outer membrane protease | - |
| GI529_RS21170 () | 4402108..4402212 | + | 105 | Protein_4111 | IS3 family transposase | - |
| GI529_RS21175 () | 4402551..4402808 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| GI529_RS21180 () | 4402891..4403588 | - | 698 | Protein_4113 | IS1 family transposase IS1A | Transposase |
| GI529_RS21185 () | 4403778..4404560 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GI529_RS21190 () | 4404577..4405209 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| GI529_RS21195 () | 4405221..4405652 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| GI529_RS21200 () | 4405783..4406589 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| GI529_RS21205 () | 4406602..4407915 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| GI529_RS21210 () | 4407927..4408205 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| GI529_RS21215 () | 4408202..4409323 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| GI529_RS21920 () | 4409568..4409684 | - | 117 | Protein_4121 | VOC family protein | - |
| GI529_RS21220 () | 4409722..4409940 | - | 219 | Protein_4122 | hypothetical protein | - |
| GI529_RS21225 () | 4410109..4410855 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| GI529_RS21230 () | 4410911..4411456 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| GI529_RS21235 () | 4411468..4411725 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| GI529_RS21240 () | 4412102..4412347 | - | 246 | Protein_4126 | GNAT family N-acetyltransferase | - |
| GI529_RS21245 () | 4412463..4413703 | + | 1241 | Protein_4127 | helicase YjhR | - |
| GI529_RS21250 () | 4414286..4415266 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| GI529_RS21255 () | 4415331..4416437 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| GI529_RS21260 () | 4416457..4417173 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| GI529_RS21265 () | 4418629..4419111 | + | 483 | Protein_4131 | hypothetical protein | VF |
| GI529_RS21270 () | 4419120..4419817 | - | 698 | Protein_4132 | IS1 family transposase IS1A | Transposase |
| GI529_RS21275 () | 4419873..4420007 | + | 135 | Protein_4133 | integrase | - |
| GI529_RS21280 () | 4420485..4421081 | + | 597 | WP_000044711.1 | hypothetical protein | VF |
| GI529_RS21285 () | 4421563..4422111 | + | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| GI529_RS21290 () | 4422176..4422715 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| GI529_RS21295 () | 4422752..4423477 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|