MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94640 bp
Accession: NZ_CP045976 Location: 1..94640 Organism: Escherichia coli strain AUSMDU00002545 Replicon: plasmid pAUSMDU00002545_01
Accession: NZ_CP045976 Location: 1..94640 Organism: Escherichia coli strain AUSMDU00002545 Replicon: plasmid pAUSMDU00002545_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD97_RS27490 () | 1..978 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| GJD97_RS27495 () | 1263..2003 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| GJD97_RS27500 () | 2124..2354 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| GJD97_RS28205 () | 2485..2977 | - | 493 | Protein_3 | Transcriptional repressor MprA | VF |
| GJD97_RS27515 () | 3098..4537 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| GJD97_RS27520 () | 4541..6661 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| GJD97_RS27525 () | 6711..9707 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| GJD97_RS27530 () | 9709..10224 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| GJD97_RS27535 () | 10765..11936 | - | 1172 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| GJD97_RS27540 () | 12115..12516 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| GJD97_RS27545 () | 12608..13441 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| GJD97_RS27550 () | 13499..14011 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| GJD97_RS27555 () | 13998..15170 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| GJD97_RS27560 () | 15209..16186 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| GJD97_RS27565 () | 16183..16782 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| GJD97_RS27570 () | 16779..17126 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| GJD97_RS27575 () | 17141..17695 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| GJD97_RS27580 () | 17692..18126 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| GJD97_RS27585 () | 18157..19380 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| GJD97_RS27590 () | 19382..20887 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| GJD97_RS27595 () | 20887..22854 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| GJD97_RS27600 () | 22855..23730 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| GJD97_RS27605 () | 23817..26513 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| GJD97_RS28210 () | 26952..27038 | + | 87 | Protein_23 | IS3 family transposase ISEhe3 | Transposase |
| GJD97_RS27610 () | 27142..27330 | - | 189 | Protein_24 | hypothetical protein | - |
| GJD97_RS27615 () | 27383..28381 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| GJD97_RS27620 () | 28455..30176 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| GJD97_RS27625 () | 30266..31372 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| GJD97_RS27630 () | 31372..32193 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| GJD97_RS27640 () | 33634..34115 | + | 482 | Protein_29 | IS1 family transposase IS1N | Transposase |
| GJD97_RS27645 () | 34371..35648 | - | 1278 | Protein_30 | Serine protease EspP | VF |
| GJD97_RS27650 () | 35741..36121 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| GJD97_RS27655 () | 36118..36465 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| GJD97_RS27660 () | 36515..38053 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| GJD97_RS27665 () | 38090..39412 | - | 1323 | Protein_34 | Serine protease EspP | VF |
| GJD97_RS27670 () | 39468..40681 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD97_RS27675 () | 40723..42036 | - | 1314 | Protein_36 | Serine protease EspP | VF |
| GJD97_RS27685 () | 42217..43205 | - | 989 | Protein_37 | IS3 family transposase IS629 | Transposase |
| GJD97_RS27690 () | 43262..43651 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| GJD97_RS27695 () | 43695..45905 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| GJD97_RS27700 () | 46082..46267 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| GJD97_RS27705 () | 46267..46683 | + | 417 | Protein_41 | IS91 family transposase | - |
| GJD97_RS27710 () | 46683..47249 | + | 567 | Protein_42 | IS3 family transposase ISSd1 | Transposase |
| GJD97_RS27715 () | 47293..47508 | + | 216 | Protein_43 | transposase | - |
| GJD97_RS27720 () | 47608..47814 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| GJD97_RS27725 () | 47909..48184 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJD97_RS27730 () | 48184..48468 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GJD97_RS27735 () | 49382..50239 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| GJD97_RS27740 () | 50232..50306 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| GJD97_RS27745 () | 50542..50796 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| GJD97_RS27750 () | 51036..51374 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| GJD97_RS27755 () | 51412..51621 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| GJD97_RS27760 () | 51667..52128 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| GJD97_RS27765 () | 52373..52585 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| GJD97_RS27770 () | 52718..53278 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| GJD97_RS27775 () | 53381..54241 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| GJD97_RS27780 () | 54300..55046 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| GJD97_RS27785 () | 55066..56454 | - | 1389 | Protein_57 | Multifunctional conjugation protein TraI | Relaxase |
| GJD97_RS27790 () | 56511..56762 | + | 252 | Protein_58 | IS3 family transposase IS1203 | Transposase |
| GJD97_RS27795 () | 56769..56939 | + | 171 | Protein_59 | IS3 family transposase IS1203 | Transposase |
| GJD97_RS27800 () | 57007..57231 | - | 225 | Protein_60 | IS3 family transposase IS3H | Transposase |
| GJD97_RS27805 () | 57305..66814 | - | 9510 | WP_000581721.1 | Toxin B | VF |
| GJD97_RS27810 () | 66921..67073 | - | 153 | Protein_62 | IS1 family transposase | - |
| GJD97_RS27815 () | 67070..67190 | - | 121 | Protein_63 | IS21 family transposase ISEc62 | Transposase |
| GJD97_RS27820 () | 67230..67493 | - | 264 | Protein_64 | IS21 family transposase ISEc62 | Transposase |
| GJD97_RS27825 () | 67587..67936 | + | 350 | Protein_65 | IS3 family transposase IS3H | Transposase |
| GJD97_RS27830 () | 68566..68997 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| GJD97_RS27835 () | 69065..71086 | - | 2022 | Protein_67 | hypothetical protein | Relaxase |
| GJD97_RS27840 () | 71220..71378 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 71443..71641 | - | 199 | NuclAT_0 | - | - |
| - () | 71443..71641 | - | 199 | NuclAT_0 | - | - |
| - () | 71443..71641 | - | 199 | NuclAT_0 | - | - |
| - () | 71443..71641 | - | 199 | NuclAT_0 | - | - |
| GJD97_RS27845 () | 71610..72469 | - | 860 | Protein_69 | plasmid SOS inhibition protein A | - |
| GJD97_RS27850 () | 72466..72900 | - | 435 | WP_000845909.1 | conjugation system SOS inhibitor PsiB | - |
| GJD97_RS27855 () | 72955..74913 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| GJD97_RS27860 () | 74979..75212 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| GJD97_RS27865 () | 75269..75721 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| GJD97_RS28215 () | 75747..75953 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| GJD97_RS27870 () | 76023..76460 | + | 438 | WP_001310283.1 | hypothetical protein | - |
| GJD97_RS27875 () | 76546..77109 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| GJD97_RS27880 () | 77156..78517 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| GJD97_RS27885 () | 78569..78799 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| GJD97_RS28220 () | 79316..79825 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| GJD97_RS27895 () | 79795..79986 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| GJD97_RS27900 () | 79983..80405 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| GJD97_RS27905 () | 80452..80754 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| GJD97_RS28225 () | 81295..82071 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| GJD97_RS27920 () | 82117..82671 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| GJD97_RS27925 () | 82565..82786 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| GJD97_RS27930 () | 82787..83470 | - | 684 | WP_000085945.1 | DNA methylase | - |
| GJD97_RS27935 () | 83547..83852 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| GJD97_RS27940 () | 83856..84758 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| GJD97_RS27945 () | 85453..86424 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GJD97_RS27950 () | 86424..87590 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| GJD97_RS27955 () | 88178..88933 | - | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| GJD97_RS27960 () | 89009..90222 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GJD97_RS27970 () | 90945..91751 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| GJD97_RS27975 () | 91752..92057 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| GJD97_RS27980 () | 92059..92277 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| GJD97_RS27985 () | 92736..93419 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| GJD97_RS27990 () | 93416..94036 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| GJD97_RS27995 () | 94033..94233 | + | 201 | WP_000708307.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|