MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39887 bp
Accession: NZ_CP045965 Location: 1..39887 Organism: Mycobacterium intracellulare subsp. chimaera strain AUSMDU00007395 Replicon: plasmid pAUSMDU00007395_02
Accession: NZ_CP045965 Location: 1..39887 Organism: Mycobacterium intracellulare subsp. chimaera strain AUSMDU00007395 Replicon: plasmid pAUSMDU00007395_02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE02_RS29360 () | 1316..1570 | - | 255 | WP_142383129.1 | antitoxin VbhA family protein | - |
| GJE02_RS29365 () | 1806..4640 | + | 2835 | WP_054585406.1 | Multifunctional conjugation protein TraI | Relaxase |
| GJE02_RS29370 () | 4785..5582 | + | 798 | WP_046182240.1 | sigma 54 modulation/S30EA ribosomal C-terminal domain-containing protein | - |
| GJE02_RS29375 () | 5651..6040 | + | 390 | Protein_4 | pyridoxamine 5'-phosphate oxidase family protein | - |
| GJE02_RS29380 () | 6269..6553 | + | 285 | WP_082122855.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GJE02_RS29385 () | 6550..6825 | + | 276 | WP_046182242.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJE02_RS29390 () | 6943..7158 | - | 216 | WP_046182243.1 | hypothetical protein | - |
| GJE02_RS29395 () | 7235..7510 | + | 276 | WP_046182244.1 | hypothetical protein | - |
| GJE02_RS29400 () | 7659..8225 | + | 567 | WP_046182262.1 | Tn3 family transposase TnBth3 | Transposase |
| GJE02_RS30085 () | 8701..9453 | + | 753 | WP_172417609.1 | 1-aminocyclopropane-1-carboxylate synthase | - |
| GJE02_RS29410 () | 9687..10643 | + | 957 | WP_082122856.1 | fatty acid desaturase | - |
| GJE02_RS29415 () | 10658..11953 | - | 1296 | WP_046182245.1 | glycosyltransferase | - |
| GJE02_RS29420 () | 12080..22348 | - | 10269 | WP_046182246.1 | Linear gramicidin synthase subunit D | VF |
| GJE02_RS29425 () | 22891..23343 | - | 453 | WP_046182247.1 | transposase | - |
| GJE02_RS29430 () | 23252..23929 | - | 678 | WP_142383130.1 | IS1380 family transposase ISCku8 | Transposase |
| GJE02_RS29435 () | 24164..25597 | + | 1434 | WP_082122853.1 | DUF2156 domain-containing protein | - |
| GJE02_RS29440 () | 26227..27399 | - | 1173 | WP_080691094.1 | DDE-type integrase/transposase/recombinase | - |
| GJE02_RS29445 () | 27321..27611 | - | 291 | WP_042910035.1 | helix-turn-helix domain-containing protein | - |
| GJE02_RS29450 () | 27831..28520 | + | 690 | WP_046182264.1 | Crp/Fnr family transcriptional regulator | - |
| GJE02_RS29455 () | 28662..30059 | - | 1398 | WP_046182251.1 | IS1380 family transposase ISMav7 | Transposase |
| GJE02_RS29460 () | 30565..31014 | - | 450 | WP_046182252.1 | hypothetical protein | - |
| GJE02_RS29465 () | 31011..31619 | - | 609 | WP_052742708.1 | Chromosome-partitioning ATPase Soj | VF |
| GJE02_RS29470 () | 31717..31977 | + | 261 | WP_046182265.1 | hypothetical protein | - |
| GJE02_RS29475 () | 32032..32391 | + | 360 | WP_052742707.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| GJE02_RS29480 () | 32994..33272 | + | 279 | WP_046182254.1 | hypothetical protein | - |
| GJE02_RS29485 () | 33557..35398 | + | 1842 | WP_046182255.1 | Long-chain-fatty-acid--AMP ligase FadD32 | VF |
| GJE02_RS29490 () | 35481..35801 | - | 321 | WP_046182256.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GJE02_RS29495 () | 35798..36007 | - | 210 | WP_046182257.1 | antitoxin MazE family protein | - |
| GJE02_RS29500 () | 36112..36693 | + | 582 | WP_046182267.1 | hypothetical protein | - |
| GJE02_RS29505 () | 36835..38064 | + | 1230 | WP_172417610.1 | hypothetical protein | - |
| GJE02_RS29510 () | 38421..38930 | - | 510 | WP_046182258.1 | hypothetical protein | - |
| GJE02_RS29515 () | 39427..39633 | + | 207 | WP_046182259.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|