MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93865 bp
Accession: NZ_CP045950 Location: 1..93865 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010529 Replicon: plasmid pAUSMDU00010529_01
Accession: NZ_CP045950 Location: 1..93865 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010529 Replicon: plasmid pAUSMDU00010529_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE11_RS23560 () | 1..990 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| GJE11_RS23565 () | 1249..1693 | - | 445 | Protein_1 | site-specific integrase | - |
| GJE11_RS23570 () | 1862..2243 | - | 382 | Protein_2 | YgiW/YdeI family stress tolerance OB fold protein | - |
| GJE11_RS23575 () | 2962..3264 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| GJE11_RS23580 () | 3539..4057 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| GJE11_RS23585 () | 4285..6693 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| GJE11_RS23590 () | 6686..7378 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| GJE11_RS23595 () | 7393..7950 | + | 558 | WP_010999940.1 | membrane protein | - |
| GJE11_RS23600 () | 8203..9078 | + | 876 | WP_020979169.1 | hypothetical protein | - |
| GJE11_RS23605 () | 9510..9722 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| GJE11_RS23610 () | 9707..10057 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| GJE11_RS23615 () | 10302..10955 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| GJE11_RS24670 () | 10945..11091 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| GJE11_RS23620 () | 11088..11987 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| GJE11_RS23625 () | 12077..12634 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| GJE11_RS23630 () | 12901..13659 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| GJE11_RS23635 () | 13756..13977 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| GJE11_RS23640 () | 14837..15718 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| GJE11_RS23645 () | 15699..15776 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| GJE11_RS23650 () | 16026..16292 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| GJE11_RS23655 () | 16471..16913 | - | 443 | Protein_20 | phospholipase | - |
| GJE11_RS23660 () | 17079..17234 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| GJE11_RS23665 () | 17247..17531 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| GJE11_RS23670 () | 17646..18209 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| GJE11_RS23675 () | 18264..19004 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| GJE11_RS23680 () | 19024..24282 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| GJE11_RS23685 () | 24364..24591 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| GJE11_RS23690 () | 24591..24989 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| GJE11_RS23695 () | 24998..27160 | - | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| GJE11_RS23700 () | 27537..28268 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| GJE11_RS23705 () | 28304..28798 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| GJE11_RS23710 () | 28814..31636 | - | 2823 | WP_001007087.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GJE11_RS23715 () | 31633..33015 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| GJE11_RS23720 () | 33005..33553 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GJE11_RS23725 () | 33540..33833 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GJE11_RS23730 () | 34047..34796 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GJE11_RS23735 () | 34808..35023 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| GJE11_RS23740 () | 35034..36860 | - | 1827 | WP_000827529.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GJE11_RS23745 () | 36857..37276 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| GJE11_RS23750 () | 37313..37951 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GJE11_RS23755 () | 37936..38244 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| GJE11_RS23760 () | 38263..39255 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| GJE11_RS23765 () | 39252..39884 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| GJE11_RS23770 () | 39881..40267 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| GJE11_RS23775 () | 40242..42890 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| GJE11_RS23780 () | 42906..43169 | - | 264 | WP_001239255.1 | hypothetical protein | - |
| GJE11_RS23785 () | 43286..43753 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| GJE11_RS23790 () | 43746..43967 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| GJE11_RS23795 () | 44102..44617 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GJE11_RS23800 () | 44614..44859 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| GJE11_RS23805 () | 44837..45433 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| GJE11_RS23810 () | 45423..46844 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| GJE11_RS23815 () | 46844..47584 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| GJE11_RS23820 () | 47571..48137 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| GJE11_RS23825 () | 48159..48470 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| GJE11_RS23830 () | 48485..48847 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| GJE11_RS23835 () | 48889..49116 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| GJE11_RS23840 () | 49210..49896 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| GJE11_RS23845 () | 50089..50469 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| GJE11_RS23850 () | 50884..51354 | + | 471 | WP_014344446.1 | transglycosylase SLT domain-containing protein | - |
| GJE11_RS24675 () | 51665..52483 | - | 819 | Protein_60 | DUF945 domain-containing protein | - |
| GJE11_RS24680 () | 52586..52744 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| GJE11_RS23865 () | 52993..53730 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| GJE11_RS23870 () | 53727..54161 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| GJE11_RS23875 () | 54201..56198 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| GJE11_RS23880 () | 56267..56509 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| GJE11_RS23885 () | 56564..57082 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| GJE11_RS23890 () | 57676..57843 | - | 168 | WP_154074060.1 | hypothetical protein | - |
| GJE11_RS23895 () | 57807..58130 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| GJE11_RS23900 () | 58366..58800 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| GJE11_RS23905 () | 58867..59301 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| GJE11_RS23915 () | 59797..60561 | - | 765 | WP_001246548.1 | membrane protein | - |
| GJE11_RS23920 () | 60633..61046 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| GJE11_RS23925 () | 61102..61323 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| GJE11_RS23930 () | 61323..62003 | - | 681 | WP_000088645.1 | DNA methylase | - |
| GJE11_RS23935 () | 62385..62741 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| GJE11_RS23940 () | 62734..63204 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| GJE11_RS23945 () | 63715..64137 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GJE11_RS23950 () | 64137..65411 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| GJE11_RS23955 () | 65493..66467 | - | 975 | WP_000064272.1 | ParB/RepB/Spo0J family partition protein | - |
| GJE11_RS23960 () | 66467..67672 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| GJE11_RS23965 () | 68087..69028 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| GJE11_RS23970 () | 69060..69626 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| GJE11_RS23975 () | 69683..70018 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| GJE11_RS23980 () | 70202..70618 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| GJE11_RS23985 () | 70704..71819 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| GJE11_RS23990 () | 72078..72566 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| GJE11_RS23995 () | 73221..73961 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| GJE11_RS24000 () | 74168..74728 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| GJE11_RS24005 () | 74712..76376 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| GJE11_RS24010 () | 76309..77334 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| GJE11_RS24015 () | 77523..78560 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| GJE11_RS24020 () | 79169..80062 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| GJE11_RS24025 () | 80236..80400 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| GJE11_RS24030 () | 80574..81341 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| GJE11_RS24685 () | 81304..81471 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| GJE11_RS24035 () | 81523..83298 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| GJE11_RS24040 () | 83579..84304 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| GJE11_RS24045 () | 84565..85215 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| GJE11_RS24050 () | 85342..85766 | - | 425 | Protein_99 | IS200/IS605 family transposase | - |
| GJE11_RS24055 () | 85823..86173 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| GJE11_RS24060 () | 86240..86800 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| GJE11_RS24065 () | 87529..88014 | - | 486 | WP_000905606.1 | membrane protein | - |
| GJE11_RS24070 () | 88008..88517 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| GJE11_RS24080 () | 88521..89234 | - | 714 | Protein_104 | EAL domain-containing protein | - |
| GJE11_RS24085 () | 89243..90025 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| GJE11_RS24090 () | 90060..90581 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| GJE11_RS24095 () | 90578..90868 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| GJE11_RS24100 () | 90870..91175 | - | 306 | WP_147161526.1 | type II toxin-antitoxin system toxin CcdB | - |
| GJE11_RS24105 () | 91177..91395 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| GJE11_RS24110 () | 92071..92592 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| GJE11_RS24115 () | 93076..93372 | + | 297 | WP_001687482.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|