MGE detailed information
MGE type: Prophage MGE length: 70715 bp
Accession: NZ_CP045941 Location: 2536254..2606968 Organism: Shigella flexneri 2a strain AUSMDU00010535 Replicon: chromosome
Accession: NZ_CP045941 Location: 2536254..2606968 Organism: Shigella flexneri 2a strain AUSMDU00010535 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE14_RS12685 () | 2531332..2532132 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| GJE14_RS12690 () | 2532145..2532996 | + | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| GJE14_RS12695 () | 2533051..2533527 | + | 477 | WP_000156246.1 | DUF986 family protein | - |
| GJE14_RS12700 () | 2533556..2534253 | + | 698 | WP_252970279.1 | IS1 family transposase | - |
| GJE14_RS12705 () | 2534716..2535282 | + | 567 | WP_001668667.1 | manganese efflux pump MntP | - |
| GJE14_RS12710 () | 2535279..2536088 | - | 810 | WP_000010128.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GJE14_RS12715 () | 2536254..2536463 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GJE14_RS12720 () | 2536476..2536619 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| GJE14_RS12725 () | 2537289..2537576 | - | 288 | WP_001006860.1 | YebO family protein | - |
| GJE14_RS12730 () | 2537651..2537794 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GJE14_RS12735 () | 2537953..2538192 | + | 240 | WP_001211010.1 | YobH family protein | - |
| GJE14_RS12740 () | 2538335..2539126 | - | 792 | WP_001262181.1 | DNA-binding transcriptional regulator KdgR | - |
| GJE14_RS12745 () | 2539303..2540676 | + | 1374 | WP_001127218.1 | MFS transporter | - |
| GJE14_RS12750 () | 2540722..2541603 | - | 882 | WP_000984517.1 | protease HtpX | - |
| GJE14_RS12755 () | 2541795..2543843 | - | 2049 | WP_001055799.1 | carboxy terminal-processing peptidase | - |
| GJE14_RS12760 () | 2543863..2544561 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| GJE14_RS12765 () | 2544658..2545155 | - | 498 | WP_001043881.1 | L-methionine (R)-S-oxide reductase | - |
| GJE14_RS12770 () | 2545285..2546568 | + | 1284 | WP_112324878.1 | membrane integrity lipid transport subunit YebS | - |
| GJE14_RS12775 () | 2546537..2549157 | + | 2621 | Protein_2502 | hypothetical protein | VF |
| GJE14_RS12780 () | 2549237..2550676 | + | 1440 | Protein_2503 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GJE14_RS12785 () | 2550794..2551030 | + | 237 | WP_001295499.1 | YebV family protein | - |
| GJE14_RS12790 () | 2551135..2551326 | + | 192 | WP_005049838.1 | YebW family protein | - |
| GJE14_RS12795 () | 2551351..2551539 | - | 189 | Protein_2506 | serine/threonine-protein phosphatase | - |
| GJE14_RS12805 () | 2552804..2553250 | - | 447 | Protein_2508 | metallophosphoesterase | - |
| GJE14_RS12815 () | 2554764..2556407 | + | 1644 | WP_154074684.1 | hypothetical protein | VF |
| GJE14_RS12820 () | 2556587..2557210 | - | 624 | WP_000551130.1 | DUF4376 domain-containing protein | - |
| GJE14_RS25730 () | 2557161..2557328 | - | 168 | Protein_2512 | IS66 family transposase ISSfl3 | Transposase |
| GJE14_RS25735 () | 2557330..2557710 | - | 381 | Protein_2513 | IS66 family transposase ISSfl3 | Transposase |
| GJE14_RS12830 () | 2558934..2559822 | + | 889 | Protein_2514 | Rha family transcriptional regulator | - |
| GJE14_RS12835 () | 2559819..2561092 | + | 1274 | WP_094105053.1 | IS3 family transposase IS2 | Transposase |
| GJE14_RS12840 () | 2561169..2561390 | + | 222 | WP_000560226.1 | killing protein KilR | - |
| GJE14_RS12845 () | 2561390..2561560 | + | 171 | WP_001359121.1 | YdaE family protein | - |
| GJE14_RS12850 () | 2561635..2561910 | + | 276 | WP_005049830.1 | hypothetical protein | - |
| GJE14_RS12855 () | 2562010..2563425 | + | 1416 | Protein_2519 | exodeoxyribonuclease VIII | - |
| GJE14_RS12860 () | 2563482..2564638 | - | 1157 | Protein_2520 | IS3 family transposase IS600 | Transposase |
| GJE14_RS12865 () | 2564737..2564997 | + | 261 | WP_005135630.1 | host-nuclease inhibitor Gam family protein | - |
| GJE14_RS12870 () | 2565003..2565359 | + | 357 | WP_232111817.1 | hypothetical protein | - |
| GJE14_RS12875 () | 2565401..2566629 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| GJE14_RS25740 () | 2566654..2567436 | + | 783 | WP_232111823.1 | hypothetical protein | - |
| GJE14_RS12890 () | 2567511..2568720 | + | 1210 | Protein_2525 | IS3 family transposase IS629 | Transposase |
| GJE14_RS12895 () | 2568768..2568935 | + | 168 | WP_005049823.1 | excisionase family protein | - |
| GJE14_RS12900 () | 2568937..2569107 | + | 171 | Protein_2527 | DUF3596 domain-containing protein | - |
| GJE14_RS12910 () | 2569875..2570516 | + | 642 | Protein_2529 | hypothetical protein ; Integrase | Integrase |
| GJE14_RS12915 () | 2570948..2571862 | + | 915 | WP_000555620.1 | hypothetical protein | VF |
| GJE14_RS12920 () | 2571862..2572689 | + | 828 | WP_000983722.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| GJE14_RS12925 () | 2572686..2573543 | + | 858 | WP_001101728.1 | hypothetical protein | ARG |
| GJE14_RS12930 () | 2573540..2574397 | + | 858 | WP_000968134.1 | hypothetical protein | ARG |
| GJE14_RS12935 () | 2574598..2575221 | - | 624 | WP_154074685.1 | DUF4376 domain-containing protein | - |
| GJE14_RS12940 () | 2575172..2576436 | - | 1265 | Protein_2535 | prophage tail fiber N-terminal domain-containing protein | - |
| GJE14_RS12945 () | 2576460..2577005 | - | 546 | WP_000902877.1 | tail fiber assembly protein | - |
| GJE14_RS25745 () | 2577008..2577397 | - | 390 | WP_047205378.1 | hypothetical protein | - |
| GJE14_RS12950 () | 2577425..2578330 | - | 906 | Protein_2538 | IS3 family transposase ISSd1 | Transposase |
| GJE14_RS12960 () | 2579102..2579254 | - | 153 | Protein_2540 | Rha family transcriptional regulator | - |
| GJE14_RS12965 () | 2579632..2580120 | - | 489 | Protein_2541 | IS3 family transposase ISLad1 | Transposase |
| GJE14_RS12970 () | 2580201..2581709 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| GJE14_RS12980 () | 2582382..2582962 | - | 581 | Protein_2543 | IS3-like element IS911 family transposase | - |
| GJE14_RS12985 () | 2582993..2584564 | - | 1572 | WP_000381321.1 | IS66 family transposase ISCro1 | Transposase |
| GJE14_RS12990 () | 2584584..2584931 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| GJE14_RS12995 () | 2584931..2585608 | - | 678 | WP_001340280.1 | IS66 family transposase ISCro1 | Transposase |
| GJE14_RS13000 () | 2585661..2585777 | - | 117 | Protein_2547 | IS3 family transposase IS911 | Transposase |
| GJE14_RS13005 () | 2586599..2588203 | - | 1605 | WP_000615491.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GJE14_RS13030 () | 2588837..2589319 | - | 483 | WP_000068107.1 | ORF6N domain-containing protein | - |
| GJE14_RS13040 () | 2590608..2590781 | - | 174 | WP_000504450.1 | hypothetical protein | - |
| GJE14_RS13045 () | 2590934..2591488 | - | 555 | WP_000640143.1 | DUF1133 family protein | - |
| GJE14_RS13050 () | 2591485..2591775 | - | 291 | WP_073828270.1 | DUF1364 domain-containing protein | - |
| GJE14_RS13055 () | 2591775..2592374 | - | 600 | WP_000940329.1 | DUF1367 family protein | - |
| GJE14_RS13060 () | 2592508..2593205 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| GJE14_RS13070 () | 2593711..2593866 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2593878..2593936 | + | 59 | - | - | Antitoxin Detail |
| GJE14_RS13075 () | 2594321..2594686 | - | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| GJE14_RS13080 () | 2594686..2595351 | - | 666 | WP_000208062.1 | hypothetical protein | - |
| GJE14_RS13085 () | 2595348..2595713 | - | 366 | WP_001229297.1 | HNH endonuclease signature motif containing protein | - |
| GJE14_RS13090 () | 2595715..2595933 | - | 219 | WP_000256998.1 | DUF4014 family protein | - |
| GJE14_RS13095 () | 2596026..2596382 | - | 357 | WP_005048249.1 | hypothetical protein | - |
| GJE14_RS13100 () | 2596440..2596862 | - | 423 | WP_001118167.1 | DUF977 family protein | - |
| GJE14_RS13105 () | 2596877..2597623 | - | 747 | WP_000788996.1 | ATP-binding protein | - |
| GJE14_RS26240 () | 2597769..2597938 | - | 170 | Protein_2564 | hypothetical protein | - |
| GJE14_RS13115 () | 2598417..2599690 | + | 1274 | WP_094105053.1 | IS3 family transposase IS2 | Transposase |
| GJE14_RS13120 () | 2599704..2600114 | - | 411 | Protein_2566 | YdaU family protein | - |
| GJE14_RS13125 () | 2600218..2601374 | + | 1157 | WP_094081493.1 | IS3 family transposase IS600 | Transposase |
| GJE14_RS13130 () | 2601419..2601853 | - | 435 | Protein_2568 | HTH-type transcriptional regulator ArgP | VF |
| GJE14_RS13135 () | 2601991..2602911 | + | 921 | WP_000981715.1 | alpha/beta hydrolase | - |
| GJE14_RS25755 () | 2602911..2603270 | + | 360 | Protein_2570 | alpha/beta hydrolase | - |
| GJE14_RS13145 () | 2603287..2604483 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| GJE14_RS13150 () | 2604712..2605293 | + | 582 | Protein_2572 | alpha/beta hydrolase | - |
| GJE14_RS13155 () | 2605311..2605949 | + | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| GJE14_RS13160 () | 2606240..2606968 | + | 729 | WP_005049761.1 | murein tripeptide amidase MpaA | - |
| GJE14_RS13165 () | 2606943..2607908 | - | 966 | WP_005049759.1 | L-Ala-D/L-Glu epimerase | - |
| GJE14_RS13170 () | 2608027..2608533 | + | 507 | WP_000084387.1 | thiol peroxidase | - |
| GJE14_RS13175 () | 2608577..2610118 | - | 1542 | WP_001306544.1 | transcriptional regulator TyrR | - |
| GJE14_RS13180 () | 2610266..2611327 | - | 1062 | WP_000138745.1 | YcjF family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|