MGE detailed information
MGE type: Prophage MGE length: 40207 bp
Accession: NZ_CP045941 Location: 1900625..1940831 Organism: Shigella flexneri 2a strain AUSMDU00010535 Replicon: chromosome
Accession: NZ_CP045941 Location: 1900625..1940831 Organism: Shigella flexneri 2a strain AUSMDU00010535 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE14_RS09265 () | 1895751..1897378 | + | 1628 | Protein_1809 | toxic metabolite efflux MATE transporter YeeO | - |
| GJE14_RS09275 () | 1898010..1898726 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GJE14_RS09280 () | 1899069..1900523 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| GJE14_RS09285 () | 1900625..1900831 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| GJE14_RS09290 () | 1900832..1902031 | - | 1200 | Protein_1813 | IS3 family transposase IS600 | Transposase |
| GJE14_RS09295 () | 1902096..1902602 | - | 507 | Protein_1814 | MFS transporter | - |
| GJE14_RS09300 () | 1902658..1903826 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| GJE14_RS09305 () | 1903933..1905195 | - | 1263 | Protein_1816 | Prophage integrase IntA ; Integrase | Integrase |
| GJE14_RS09315 () | 1905533..1906330 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| GJE14_RS09325 () | 1906541..1907591 | - | 1051 | Protein_1818 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GJE14_RS09330 () | 1907591..1907731 | - | 141 | Protein_1819 | DUF4224 domain-containing protein | - |
| GJE14_RS09335 () | 1907758..1908174 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 1908756..1908814 | - | 59 | - | - | Antitoxin Detail |
| GJE14_RS09340 () | 1908826..1908981 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| GJE14_RS09350 () | 1909149..1909427 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| GJE14_RS09355 () | 1909429..1910487 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| GJE14_RS09360 () | 1910488..1910853 | + | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GJE14_RS09365 () | 1910850..1911538 | + | 689 | Protein_1825 | bacteriophage antitermination protein Q | - |
| GJE14_RS09390 () | 1912334..1912549 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| GJE14_RS09395 () | 1912648..1913322 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| GJE14_RS09400 () | 1913319..1913669 | + | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| GJE14_RS09405 () | 1913666..1914478 | + | 813 | Protein_1829 | IS66 family transposase ISSfl3 | Transposase |
| GJE14_RS09410 () | 1914544..1915700 | + | 1157 | WP_094105050.1 | IS3 family transposase IS600 | Transposase |
| GJE14_RS09415 () | 1915725..1916084 | + | 360 | Protein_1831 | hypothetical protein | - |
| GJE14_RS09420 () | 1916094..1916255 | + | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| GJE14_RS09425 () | 1916252..1917748 | + | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| GJE14_RS09430 () | 1917748..1918104 | + | 357 | WP_001062338.1 | phage tail tube protein | - |
| GJE14_RS09435 () | 1918104..1918439 | + | 336 | WP_001251340.1 | phage tail assembly protein | - |
| GJE14_RS09440 () | 1918524..1920473 | + | 1950 | WP_000785377.1 | phage tail tape measure protein | - |
| GJE14_RS09445 () | 1920541..1921023 | + | 483 | WP_000594909.1 | hypothetical protein | - |
| GJE14_RS09455 () | 1921871..1922728 | + | 858 | Protein_1839 | IS3 family transposase ISSd1 | Transposase |
| GJE14_RS09460 () | 1922769..1923248 | + | 480 | Protein_1840 | DUF4376 domain-containing protein | - |
| GJE14_RS09465 () | 1923428..1925071 | - | 1644 | WP_014532281.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| GJE14_RS09470 () | 1925387..1926055 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| GJE14_RS09475 () | 1926112..1926381 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| GJE14_RS09480 () | 1927459..1928109 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| GJE14_RS09485 () | 1928367..1929002 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| GJE14_RS09490 () | 1929003..1930007 | - | 1005 | Protein_1846 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| GJE14_RS09495 () | 1930116..1930529 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| GJE14_RS09500 () | 1930662..1931333 | + | 672 | WP_001347103.1 | putative transcriptional regulatory protein YedW | VF |
| GJE14_RS09505 () | 1931333..1932691 | + | 1359 | WP_000826714.1 | two-component system sensor histidine kinase HprS | - |
| GJE14_RS09510 () | 1932799..1933650 | - | 852 | WP_000218218.1 | protein deglycase HchA | - |
| GJE14_RS09520 () | 1935021..1935191 | - | 171 | Protein_1852 | porin | - |
| GJE14_RS09525 () | 1935294..1936522 | + | 1229 | WP_111778310.1 | IS3 family transposase IS2 | Transposase |
| GJE14_RS09530 () | 1936534..1937244 | - | 711 | Protein_1854 | porin | - |
| GJE14_RS09535 () | 1937361..1938508 | + | 1148 | WP_085949497.1 | IS3 family transposase ISEhe3 | Transposase |
| GJE14_RS09540 () | 1938509..1938766 | + | 258 | WP_032155863.1 | cell division protein DrpB | - |
| GJE14_RS09545 () | 1938845..1939346 | + | 502 | Protein_1857 | HD domain-containing protein | - |
| GJE14_RS09550 () | 1939413..1940831 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| GJE14_RS09555 () | 1940812..1941282 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| GJE14_RS09560 () | 1941271..1942191 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| GJE14_RS09565 () | 1942364..1943281 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| GJE14_RS09570 () | 1943360..1943542 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| GJE14_RS09575 () | 1943713..1945407 | + | 1695 | Protein_1863 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|