MGE detailed information
MGE type: Mobilizable plasmid MGE length: 57073 bp
Accession: NZ_CP045935 Location: 1..57073 Organism: Shigella sonnei strain AUSMDU00010534 Replicon: plasmid pAUSMDU00010534_03
Accession: NZ_CP045935 Location: 1..57073 Organism: Shigella sonnei strain AUSMDU00010534 Replicon: plasmid pAUSMDU00010534_03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE15_RS25245 (GJE15_25245) | 1..1029 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| GJE15_RS26355 | 2375..2527 | + | 153 | Protein_1 | DUF5431 family protein | - |
| GJE15_RS25250 (GJE15_25250) | 2472..2594 | + | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| GJE15_RS25255 (GJE15_25255) | 2744..3340 | + | 597 | WP_000125164.1 | ProQ/FINO family protein | - |
| GJE15_RS26360 | 3358..3642 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| GJE15_RS25265 (GJE15_25265) | 3716..4381 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| GJE15_RS25270 (GJE15_25270) | 4980..5309 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| GJE15_RS26365 | 5417..5563 | - | 147 | WP_001356709.1 | hypothetical protein | - |
| GJE15_RS25275 (GJE15_25275) | 5889..6212 | + | 324 | WP_000427402.1 | hypothetical protein | - |
| GJE15_RS25280 (GJE15_25280) | 6253..6462 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| GJE15_RS25285 (GJE15_25285) | 6560..6784 | + | 225 | WP_000814384.1 | hypothetical protein | - |
| GJE15_RS25290 (GJE15_25290) | 6836..7096 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| GJE15_RS25295 (GJE15_25295) | 7086..7337 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| GJE15_RS25300 (GJE15_25300) | 7887..8165 | + | 279 | WP_135171922.1 | cobalamin biosynthesis protein CbiX | - |
| GJE15_RS26370 | 8553..8996 | - | 444 | WP_000192626.1 | hypothetical protein | - |
| GJE15_RS25310 (GJE15_25310) | 9293..9475 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| GJE15_RS25315 (GJE15_25315) | 9500..9937 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GJE15_RS25320 (GJE15_25320) | 10068..10388 | - | 321 | WP_135171923.1 | hypothetical protein | - |
| GJE15_RS25325 (GJE15_25325) | 10392..10679 | - | 288 | WP_000212745.1 | hypothetical protein | - |
| GJE15_RS26375 | 11011..11133 | - | 123 | Protein_19 | hypothetical protein | - |
| GJE15_RS25335 (GJE15_25335) | 11153..11752 | - | 600 | WP_000091423.1 | hypothetical protein | - |
| GJE15_RS25340 (GJE15_25340) | 11799..12500 | - | 702 | WP_000280996.1 | StbB family protein | - |
| GJE15_RS25345 (GJE15_25345) | 12506..12985 | - | 480 | WP_001058980.1 | hypothetical protein | - |
| GJE15_RS25350 (GJE15_25350) | 13315..13656 | + | 342 | WP_000727176.1 | hypothetical protein | Relaxase |
| GJE15_RS25355 (GJE15_25355) | 13653..17810 | + | 4158 | WP_000637172.1 | hypothetical protein | - |
| GJE15_RS25360 (GJE15_25360) | 17853..18293 | - | 441 | WP_154074675.1 | hypothetical protein | - |
| GJE15_RS26380 | 18538..18969 | - | 432 | WP_000465832.1 | hypothetical protein | - |
| GJE15_RS25370 (GJE15_25370) | 19115..19321 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| GJE15_RS25375 (GJE15_25375) | 19390..21555 | - | 2166 | WP_032249640.1 | type IA DNA topoisomerase | - |
| GJE15_RS25380 (GJE15_25380) | 21567..22154 | - | 588 | WP_000275457.1 | DUF6012 family protein | - |
| GJE15_RS25385 (GJE15_25385) | 22295..22699 | - | 405 | WP_001218542.1 | hypothetical protein | - |
| GJE15_RS25390 (GJE15_25390) | 22715..23250 | - | 536 | Protein_31 | thermonuclease family protein | - |
| GJE15_RS25395 (GJE15_25395) | 23280..23933 | - | 654 | WP_000572548.1 | hypothetical protein | - |
| GJE15_RS25400 (GJE15_25400) | 23945..25069 | - | 1125 | WP_000486719.1 | site-specific integrase | - |
| GJE15_RS25405 (GJE15_25405) | 27142..28386 | - | 1245 | WP_000750517.1 | hypothetical protein | VF |
| GJE15_RS25410 (GJE15_25410) | 28399..29034 | - | 636 | WP_154074676.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| GJE15_RS25415 (GJE15_25415) | 29038..29520 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| GJE15_RS25420 (GJE15_25420) | 29587..30144 | - | 558 | WP_000095047.1 | type 4 pilus major pilin | - |
| GJE15_RS25425 (GJE15_25425) | 30189..31298 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| GJE15_RS25430 (GJE15_25430) | 31289..32827 | - | 1539 | WP_000466224.1 | Type II secretion system protein E | VF |
| GJE15_RS25435 (GJE15_25435) | 32852..33346 | - | 495 | WP_097739096.1 | hypothetical protein | VF |
| GJE15_RS25440 (GJE15_25440) | 33330..34652 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| GJE15_RS25445 (GJE15_25445) | 34691..36334 | - | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| GJE15_RS25450 (GJE15_25450) | 36385..38343 | - | 1959 | WP_000338976.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GJE15_RS25455 (GJE15_25455) | 38359..39414 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| GJE15_RS25460 (GJE15_25460) | 39433..40572 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| GJE15_RS25465 (GJE15_25465) | 40562..41332 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| GJE15_RS25470 (GJE15_25470) | 41329..42063 | - | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| GJE15_RS25475 (GJE15_25475) | 42229..44586 | - | 2358 | WP_000548953.1 | VirB4 family type IV secretion system protein | - |
| GJE15_RS25480 (GJE15_25480) | 44592..44912 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| GJE15_RS26385 | 44983..45273 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| GJE15_RS25490 (GJE15_25490) | 45273..45857 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| GJE15_RS25495 (GJE15_25495) | 45878..46276 | - | 399 | WP_001153666.1 | hypothetical protein | - |
| GJE15_RS25500 (GJE15_25500) | 46395..46832 | - | 438 | WP_000539664.1 | type IV pilus biogenesis protein PilM | - |
| GJE15_RS25505 (GJE15_25505) | 46838..48073 | - | 1236 | WP_000733398.1 | hypothetical protein | VF |
| GJE15_RS25510 (GJE15_25510) | 48076..48363 | - | 288 | WP_001326593.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| GJE15_RS25515 (GJE15_25515) | 48535..49170 | - | 636 | WP_000835770.1 | hypothetical protein | - |
| GJE15_RS25520 (GJE15_25520) | 49218..50027 | + | 810 | WP_001005148.1 | DUF5710 domain-containing protein | - |
| GJE15_RS25525 (GJE15_25525) | 50250..50474 | - | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| GJE15_RS25530 (GJE15_25530) | 50483..51127 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| GJE15_RS25535 (GJE15_25535) | 51133..52128 | - | 996 | WP_001028541.1 | hypothetical protein | VF |
| GJE15_RS25540 (GJE15_25540) | 52132..52389 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| GJE15_RS25545 (GJE15_25545) | 52386..52739 | - | 354 | WP_236918887.1 | hypothetical protein | - |
| GJE15_RS25550 (GJE15_25550) | 52951..53607 | - | 657 | WP_001243161.1 | hypothetical protein | - |
| GJE15_RS25555 (GJE15_25555) | 53792..54235 | - | 444 | WP_000964332.1 | NfeD family protein | - |
| GJE15_RS25560 (GJE15_25560) | 54298..55251 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| GJE15_RS25565 (GJE15_25565) | 55297..55491 | - | 195 | WP_001127356.1 | DUF1187 family protein | - |
| GJE15_RS25570 (GJE15_25570) | 55484..55936 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|