MGE detailed information
MGE type: Prophage MGE length: 33898 bp
Accession: NZ_CP045932 Location: 1869211..1903108 Organism: Shigella sonnei strain AUSMDU00010534 Replicon: chromosome
Accession: NZ_CP045932 Location: 1869211..1903108 Organism: Shigella sonnei strain AUSMDU00010534 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE15_RS09405 () | 1865294..1865935 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GJE15_RS09410 () | 1865991..1867169 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GJE15_RS09415 () | 1867303..1867593 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| GJE15_RS09420 () | 1867660..1868016 | + | 357 | WP_001295500.1 | protein YebF | - |
| GJE15_RS09425 () | 1868343..1869002 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| GJE15_RS09430 () | 1869211..1871271 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| GJE15_RS09435 () | 1871268..1871930 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| GJE15_RS09440 () | 1871954..1872610 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| GJE15_RS09445 () | 1872712..1872942 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| GJE15_RS09450 () | 1873081..1873455 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| GJE15_RS09455 () | 1873459..1874331 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| GJE15_RS09460 () | 1874344..1874685 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 1874713..1874947 | - | 235 | - | - | Antitoxin Detail |
| - | 1874843..1874946 | + | 104 | - | - | Toxin Detail |
| GJE15_RS09465 () | 1875078..1876154 | - | 1077 | WP_001189101.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| GJE15_RS09470 () | 1876191..1876436 | - | 246 | Protein_1875 | IS1 family transposase | - |
| GJE15_RS09480 () | 1877770..1878224 | - | 455 | Protein_1877 | IS1-like element IS1A family transposase | - |
| GJE15_RS09485 () | 1878253..1878513 | - | 261 | WP_077447296.1 | excisionase | - |
| GJE15_RS09490 () | 1878658..1879814 | + | 1157 | WP_087879964.1 | IS3-like element IS600 family transposase | - |
| GJE15_RS09495 () | 1879930..1881645 | - | 1716 | WP_134811233.1 | T3SS effector E3 ubiquitin-protein ligase IpaH3 | - |
| GJE15_RS09505 () | 1883654..1883827 | + | 174 | Protein_1882 | metallophosphoesterase | - |
| GJE15_RS09515 () | 1884593..1884898 | + | 306 | Protein_1884 | serine/threonine-protein phosphatase | - |
| GJE15_RS09520 () | 1884956..1886112 | + | 1157 | WP_087879964.1 | IS3-like element IS600 family transposase | - |
| GJE15_RS09525 () | 1886154..1886354 | + | 201 | Protein_1886 | serine/threonine-protein phosphatase | - |
| GJE15_RS09530 () | 1886355..1886546 | - | 192 | WP_001296140.1 | YebW family protein | - |
| GJE15_RS09535 () | 1886651..1886809 | - | 159 | Protein_1888 | DUF1480 family protein | - |
| GJE15_RS09540 () | 1886867..1887564 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| GJE15_RS25950 () | 1887581..1887664 | - | 84 | Protein_1890 | DUF1480 family protein | - |
| GJE15_RS09545 () | 1887782..1889221 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GJE15_RS09550 () | 1889302..1891935 | - | 2634 | WP_005138565.1 | lipid-binding membrane homeostasis protein YebT | - |
| GJE15_RS09555 () | 1891904..1893187 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| GJE15_RS09560 () | 1893317..1893814 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| GJE15_RS09565 () | 1893911..1894609 | + | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| GJE15_RS09570 () | 1894629..1896677 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| GJE15_RS09575 () | 1896869..1897750 | + | 882 | WP_000984517.1 | protease HtpX | - |
| GJE15_RS09580 () | 1897796..1898859 | - | 1064 | Protein_1898 | MFS transporter | - |
| GJE15_RS09585 () | 1899036..1899827 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| GJE15_RS09590 () | 1899970..1900209 | - | 240 | WP_001211011.1 | YobH family protein | - |
| GJE15_RS09595 () | 1900368..1900511 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GJE15_RS09600 () | 1900679..1901659 | - | 981 | WP_000019473.1 | IS5-like element ISKpn26 family transposase | - |
| GJE15_RS09605 () | 1901786..1902073 | + | 288 | WP_001006860.1 | YebO family protein | - |
| GJE15_RS09610 () | 1902743..1902886 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| GJE15_RS09615 () | 1902899..1903108 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GJE15_RS09620 () | 1903274..1904083 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GJE15_RS09625 () | 1904080..1904646 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| GJE15_RS09630 () | 1905075..1905533 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| GJE15_RS09635 () | 1905588..1906439 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| GJE15_RS09640 () | 1906452..1907252 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|