MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103298 bp
Accession: NZ_CP045916 Location: 5478545..5581842 Organism: Pseudomonas aeruginosa strain CF39S Replicon: chromosome
Accession: NZ_CP045916 Location: 5478545..5581842 Organism: Pseudomonas aeruginosa strain CF39S Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIY05_RS25525 () | 5474171..5478316 | + | 4146 | WP_003103857.1 | two-partner secretion system exoprotein TpsA4 | - |
| GIY05_RS25530 () | 5478682..5479542 | + | 861 | WP_003158180.1 | ParA family protein | - |
| GIY05_RS25535 () | 5479544..5480269 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| GIY05_RS25540 () | 5480266..5480763 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| GIY05_RS25545 () | 5480769..5481515 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| GIY05_RS25550 () | 5481512..5482198 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| GIY05_RS25555 () | 5482198..5482899 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| GIY05_RS25560 () | 5482896..5483603 | + | 708 | WP_003103848.1 | HNH endonuclease | - |
| GIY05_RS25565 () | 5483587..5483805 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| GIY05_RS25570 () | 5483802..5485145 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| GIY05_RS25575 () | 5485584..5486030 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| GIY05_RS25580 () | 5486208..5486393 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| GIY05_RS25585 () | 5486383..5486910 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| GIY05_RS25590 () | 5486907..5487164 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| GIY05_RS25595 () | 5487157..5487654 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| GIY05_RS25600 () | 5487647..5487880 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| GIY05_RS25605 () | 5487880..5488896 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| GIY05_RS25610 () | 5488899..5489147 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| GIY05_RS25615 () | 5489144..5490877 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| GIY05_RS25620 () | 5490905..5491660 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| GIY05_RS25625 () | 5491663..5492988 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| GIY05_RS25630 () | 5493958..5494155 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| GIY05_RS25635 () | 5494311..5495039 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| GIY05_RS25640 () | 5495045..5495593 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| GIY05_RS25645 () | 5495640..5496479 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| GIY05_RS25650 () | 5496509..5496997 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| GIY05_RS25655 () | 5497105..5497350 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| GIY05_RS25660 () | 5497416..5497634 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| GIY05_RS25665 () | 5497834..5498094 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| GIY05_RS25670 () | 5498116..5498526 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| GIY05_RS25675 () | 5498526..5498756 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| GIY05_RS25680 () | 5499012..5500931 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| GIY05_RS25685 () | 5501239..5501448 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| GIY05_RS25690 () | 5501669..5503558 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| GIY05_RS25695 () | 5503555..5505528 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| GIY05_RS25700 () | 5505650..5506432 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| GIY05_RS25705 () | 5506465..5507718 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| GIY05_RS25710 () | 5507892..5509016 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| GIY05_RS25715 () | 5509016..5510725 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| GIY05_RS25720 () | 5510729..5512054 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| GIY05_RS25725 () | 5512044..5512577 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| GIY05_RS25730 () | 5512586..5514166 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| GIY05_RS25735 () | 5514166..5515245 | + | 1080 | WP_003099764.1 | hypothetical protein | VF |
| GIY05_RS25740 () | 5515267..5515797 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| GIY05_RS25745 () | 5515794..5516750 | + | 957 | WP_003117051.1 | hypothetical protein | VF |
| GIY05_RS25750 () | 5516743..5518122 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| GIY05_RS25755 () | 5518140..5518577 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| GIY05_RS34465 () | 5519640..5519885 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| GIY05_RS25765 () | 5519960..5520133 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| GIY05_RS25770 () | 5520594..5521073 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| GIY05_RS25775 () | 5521211..5521369 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| GIY05_RS25780 () | 5521443..5521640 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| GIY05_RS25785 () | 5522125..5522832 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| GIY05_RS25790 () | 5523068..5523418 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| GIY05_RS25795 () | 5523475..5524107 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| GIY05_RS25800 () | 5524104..5524379 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| GIY05_RS25805 () | 5524449..5524811 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| GIY05_RS25810 () | 5524879..5525133 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| GIY05_RS25815 () | 5525226..5525831 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| GIY05_RS25820 () | 5525861..5527306 | + | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| GIY05_RS25825 () | 5527274..5527606 | - | 333 | WP_003158167.1 | hypothetical protein | - |
| GIY05_RS25830 () | 5527599..5528030 | - | 432 | WP_003158166.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GIY05_RS25835 () | 5528135..5528818 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| GIY05_RS25840 () | 5529682..5530056 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| GIY05_RS25845 () | 5530081..5530665 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| GIY05_RS25850 () | 5530650..5531246 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| GIY05_RS25855 () | 5531798..5532190 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| GIY05_RS25860 () | 5532209..5532532 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| GIY05_RS25865 () | 5533359..5533631 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| GIY05_RS25870 () | 5533849..5534547 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| GIY05_RS25875 () | 5534558..5535313 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| GIY05_RS25880 () | 5535298..5535879 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| GIY05_RS25885 () | 5535876..5536376 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| GIY05_RS25890 () | 5536448..5536654 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| GIY05_RS25895 () | 5536658..5538889 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| GIY05_RS25900 () | 5538889..5539635 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| GIY05_RS25905 () | 5539653..5540144 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| GIY05_RS25910 () | 5540386..5541867 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| GIY05_RS25915 () | 5541999..5543108 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| GIY05_RS25920 () | 5543154..5543465 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| GIY05_RS25925 () | 5543638..5543937 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| GIY05_RS25930 () | 5544031..5544369 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| GIY05_RS25935 () | 5544366..5544605 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| GIY05_RS25940 () | 5544623..5544979 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| GIY05_RS25945 () | 5544990..5545376 | + | 387 | WP_003158156.1 | TIGR03750 family conjugal transfer protein | - |
| GIY05_RS25950 () | 5545373..5546032 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| GIY05_RS25955 () | 5546029..5546913 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| GIY05_RS25960 () | 5546897..5548402 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| GIY05_RS25965 () | 5548380..5548823 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| GIY05_RS25970 () | 5548823..5551765 | + | 2943 | WP_015060177.1 | conjugative transfer ATPase | - |
| GIY05_RS25975 () | 5551762..5552046 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| GIY05_RS25980 () | 5552043..5552699 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| GIY05_RS25985 () | 5552696..5552914 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| GIY05_RS25990 () | 5553473..5554660 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| GIY05_RS25995 () | 5554683..5555105 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| GIY05_RS26000 () | 5555095..5555961 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| GIY05_RS26005 () | 5556099..5556530 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| GIY05_RS26010 () | 5556530..5557468 | + | 939 | WP_003158146.1 | TIGR03756 family integrating conjugative element protein | - |
| GIY05_RS26015 () | 5557486..5558868 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| GIY05_RS26020 () | 5558868..5559215 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| GIY05_RS26025 () | 5559212..5560747 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GIY05_RS26030 () | 5560777..5561130 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| GIY05_RS26035 () | 5561249..5561521 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GIY05_RS26040 () | 5561525..5561875 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GIY05_RS26045 () | 5562253..5570766 | - | 8514 | WP_003125103.1 | hypothetical protein | VF |
| GIY05_RS26050 () | 5571331..5571594 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| GIY05_RS26055 () | 5571608..5571832 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| GIY05_RS26060 () | 5572038..5572766 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| GIY05_RS26065 () | 5572837..5573199 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| GIY05_RS26070 () | 5573303..5573797 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| GIY05_RS26075 () | 5573906..5575924 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| GIY05_RS26080 () | 5576080..5577273 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| GIY05_RS26085 () | 5577661..5578017 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| GIY05_RS26090 () | 5578078..5578230 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| GIY05_RS26095 () | 5578229..5580148 | + | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| GIY05_RS26100 () | 5580145..5581428 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GIY05_RS26120 () | 5582280..5584844 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| GIY05_RS26125 () | 5585000..5585728 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| GIY05_RS26130 () | 5585725..5586687 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|