MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 175438 bp
Accession: NZ_CP045913 Location: 4389126..4564563 Organism: Serratia proteamaculans strain 336X Replicon: chromosome
Accession: NZ_CP045913 Location: 4389126..4564563 Organism: Serratia proteamaculans strain 336X Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHV41_RS20815 () | 4384826..4386268 | - | 1443 | WP_153859914.1 | serine/threonine protein kinase | - |
| GHV41_RS20820 () | 4386317..4388980 | - | 2664 | WP_153859915.1 | type VI secretion system ATPase TssH | - |
| GHV41_RS20825 () | 4389038..4390111 | - | 1074 | WP_153859916.1 | type VI secretion system baseplate subunit TssG | - |
| GHV41_RS20830 () | 4390108..4391994 | - | 1887 | WP_153859917.1 | hypothetical protein | VF |
| GHV41_RS20835 () | 4391999..4392574 | - | 576 | WP_017893256.1 | hypothetical protein | VF |
| GHV41_RS20840 () | 4392577..4393374 | - | 798 | WP_153860950.1 | hypothetical protein | VF |
| GHV41_RS20845 () | 4393410..4394396 | - | 987 | WP_153859918.1 | type VI secretion system-associated protein | - |
| GHV41_RS20850 () | 4394427..4395200 | - | 774 | WP_153859919.1 | protein phosphatase 2C domain-containing protein | - |
| GHV41_RS20855 () | 4395200..4396948 | - | 1749 | WP_153859920.1 | hypothetical protein | VF |
| GHV41_RS20860 () | 4397170..4397652 | - | 483 | WP_012145727.1 | Protein hcp1 | VF |
| GHV41_RS20865 () | 4397850..4398290 | - | 441 | WP_112349603.1 | hypothetical protein | - |
| GHV41_RS20870 () | 4398287..4398793 | - | 507 | WP_153859921.1 | type VI secretion system amidase effector protein Tae4 | - |
| GHV41_RS20875 () | 4398850..4400355 | - | 1506 | WP_012145726.1 | hypothetical protein | VF |
| GHV41_RS20880 () | 4400359..4400895 | - | 537 | WP_012145725.1 | hypothetical protein | VF |
| GHV41_RS20885 () | 4401000..4402025 | - | 1026 | WP_153859922.1 | hypothetical protein | VF |
| GHV41_RS20890 () | 4402049..4402768 | - | 720 | WP_153860951.1 | type VI secretion system-associated protein TagF | - |
| GHV41_RS20895 () | 4402787..4406425 | - | 3639 | WP_153859923.1 | hypothetical protein | VF |
| GHV41_RS20900 () | 4406425..4407627 | - | 1203 | WP_153860952.1 | Motility protein B | VF |
| GHV41_RS20905 () | 4407649..4408995 | - | 1347 | WP_153859924.1 | hypothetical protein | VF |
| GHV41_RS20910 () | 4409036..4409566 | - | 531 | WP_153859925.1 | hypothetical protein | VF |
| GHV41_RS20915 () | 4409593..4410093 | - | 501 | WP_153859926.1 | hypothetical protein | - |
| GHV41_RS20920 () | 4410160..4410447 | - | 288 | WP_153859927.1 | hypothetical protein | - |
| GHV41_RS20925 () | 4411207..4412139 | - | 933 | WP_153859928.1 | LysR family transcriptional regulator | - |
| GHV41_RS20930 () | 4412237..4412884 | + | 648 | WP_153859929.1 | pyroglutamyl-peptidase I | - |
| GHV41_RS20935 () | 4412928..4413962 | - | 1035 | WP_153859930.1 | NADP-dependent oxidoreductase | - |
| GHV41_RS20940 () | 4414039..4414458 | - | 420 | WP_135317048.1 | universal stress protein UspC | - |
| GHV41_RS20945 () | 4414610..4414825 | - | 216 | WP_012145712.1 | transcription modulator YdgT | - |
| GHV41_RS20950 () | 4416215..4416565 | + | 351 | WP_044552100.1 | Flagellar transcriptional regulator FlhD | VF |
| GHV41_RS20955 () | 4416568..4417149 | + | 582 | WP_037418921.1 | Flagellar transcriptional regulator FlhC | VF |
| GHV41_RS20960 () | 4417308..4418198 | + | 891 | WP_017893240.1 | Motility protein A | VF |
| GHV41_RS20965 () | 4418195..4419160 | + | 966 | WP_153859931.1 | Motility protein B | VF |
| GHV41_RS20970 () | 4419165..4421138 | + | 1974 | WP_153859932.1 | Chemotaxis protein CheA | VF |
| GHV41_RS20975 () | 4421171..4421671 | + | 501 | WP_012145706.1 | Chemotaxis protein CheW | VF |
| GHV41_RS20980 () | 4421844..4423514 | + | 1671 | WP_153859933.1 | Methyl-accepting chemotaxis protein I | VF |
| GHV41_RS20985 () | 4423614..4425239 | + | 1626 | WP_153859934.1 | Methyl-accepting chemotaxis protein IV | VF |
| GHV41_RS20990 () | 4425268..4426140 | + | 873 | WP_026142427.1 | Chemotaxis protein methyltransferase | VF |
| GHV41_RS20995 () | 4426140..4427189 | + | 1050 | WP_153859935.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| GHV41_RS21000 () | 4427441..4427830 | + | 390 | WP_012145701.1 | Chemotaxis protein CheY | VF |
| GHV41_RS21005 () | 4427842..4428486 | + | 645 | WP_153859936.1 | Protein phosphatase CheZ | VF |
| GHV41_RS21010 () | 4428614..4428847 | + | 234 | WP_153859937.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GHV41_RS21015 () | 4428847..4429245 | + | 399 | WP_153859938.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GHV41_RS21020 () | 4429374..4430525 | + | 1152 | WP_153859939.1 | Flagellar biosynthetic protein FlhB | VF |
| GHV41_RS21025 () | 4430518..4432596 | + | 2079 | WP_153859940.1 | Flagellar biosynthesis protein FlhA | VF |
| GHV41_RS21030 () | 4432596..4433000 | + | 405 | WP_153859941.1 | Flagellar protein FlhE | VF |
| GHV41_RS21035 () | 4433005..4433307 | - | 303 | WP_153859942.1 | helix-turn-helix domain-containing protein | - |
| GHV41_RS21040 () | 4433553..4433987 | - | 435 | WP_153859943.1 | Flagella synthesis protein FlgN | VF |
| GHV41_RS21045 () | 4434034..4434360 | - | 327 | WP_153859944.1 | Negative regulator of flagellin synthesis | VF |
| GHV41_RS21050 () | 4434482..4435135 | - | 654 | WP_153859945.1 | Flagella basal body P-ring formation protein FlgA | VF |
| GHV41_RS21055 () | 4435296..4435709 | + | 414 | WP_153859946.1 | Flagellar basal body rod protein FlgB | VF |
| GHV41_RS21060 () | 4435715..4436119 | + | 405 | WP_017893228.1 | Flagellar basal-body rod protein FlgC | VF |
| GHV41_RS21065 () | 4436132..4436809 | + | 678 | WP_012145690.1 | Basal-body rod modification protein FlgD | VF |
| GHV41_RS21070 () | 4436878..4438101 | + | 1224 | WP_153859947.1 | Flagellar hook protein FlgE | VF |
| GHV41_RS21075 () | 4438114..4438869 | + | 756 | WP_153859948.1 | Flagellar basal-body rod protein FlgF | VF |
| GHV41_RS21080 () | 4438888..4439670 | + | 783 | WP_012145687.1 | Flagellar basal-body rod protein FlgG | VF |
| GHV41_RS21085 () | 4439759..4440460 | + | 702 | WP_085117289.1 | Flagellar L-ring protein | VF |
| GHV41_RS21090 () | 4440471..4441571 | + | 1101 | WP_153859949.1 | Flagellar P-ring protein | VF |
| GHV41_RS21095 () | 4441571..4442527 | + | 957 | WP_153859950.1 | Peptidoglycan hydrolase FlgJ | VF |
| GHV41_RS21100 () | 4442801..4444447 | + | 1647 | WP_153859951.1 | Flagellar hook-associated protein 1 | VF |
| GHV41_RS21105 () | 4444506..4445465 | + | 960 | WP_153859952.1 | Flagellar hook-associated protein 3 | VF |
| GHV41_RS21110 () | 4445837..4447279 | - | 1443 | WP_153859953.1 | DUF1996 domain-containing protein | - |
| GHV41_RS21115 () | 4447723..4448502 | - | 780 | WP_153859954.1 | Surface presentation of antigens protein SpaR | VF |
| GHV41_RS21120 () | 4448505..4448774 | - | 270 | WP_037419012.1 | hypothetical protein | VF |
| GHV41_RS21125 () | 4448787..4449521 | - | 735 | WP_153860953.1 | Flagellar biosynthetic protein FliP | VF |
| GHV41_RS21130 () | 4449620..4450024 | - | 405 | WP_153859955.1 | Flagellar protein FliO | VF |
| GHV41_RS21135 () | 4450024..4450437 | - | 414 | WP_153859956.1 | Flagellar motor switch protein FliN | VF |
| GHV41_RS21140 () | 4450434..4451435 | - | 1002 | WP_012145676.1 | Flagellar motor switch protein FliM | VF |
| GHV41_RS21145 () | 4451441..4451926 | - | 486 | WP_153859957.1 | hypothetical protein | VF |
| GHV41_RS21150 () | 4452063..4453286 | - | 1224 | WP_153859958.1 | Flagellar hook-length control protein | VF |
| GHV41_RS21155 () | 4453283..4453729 | - | 447 | WP_153859959.1 | Flagellar FliJ protein | VF |
| GHV41_RS21160 () | 4453752..4455113 | - | 1362 | WP_153859960.1 | Flagellum-specific ATP synthase | VF |
| GHV41_RS21165 () | 4455113..4455817 | - | 705 | WP_153859961.1 | Flagellar assembly protein FliH | VF |
| GHV41_RS21170 () | 4455810..4456820 | - | 1011 | WP_071593025.1 | Flagellar motor switch protein FliG | VF |
| GHV41_RS21175 () | 4456799..4458490 | - | 1692 | WP_153859962.1 | Flagellar M-ring protein | VF |
| GHV41_RS21180 () | 4458925..4459239 | + | 315 | WP_153859963.1 | Flagellar hook-basal body complex protein FliE | VF |
| GHV41_RS21185 () | 4459382..4460695 | - | 1314 | WP_153859964.1 | hypothetical protein | - |
| GHV41_RS26750 () | 4461586..4461791 | - | 206 | Protein_4126 | hypothetical protein | - |
| GHV41_RS21190 () | 4461816..4462682 | - | 867 | WP_153859965.1 | helix-turn-helix transcriptional regulator | - |
| GHV41_RS21195 () | 4463029..4463397 | - | 369 | WP_153859966.1 | Flagellar protein FliT | VF |
| GHV41_RS21200 () | 4463397..4463807 | - | 411 | WP_153859967.1 | Flagellar secretion chaperone FliS | VF |
| GHV41_RS21205 () | 4463835..4465232 | - | 1398 | WP_153859968.1 | Flagellar hook-associated protein 2 | VF |
| GHV41_RS21210 () | 4465514..4466752 | + | 1239 | WP_044552034.1 | Flagellin | VF |
| GHV41_RS21215 () | 4467083..4467805 | + | 723 | WP_153859969.1 | RNA polymerase sigma factor FliA | VF |
| GHV41_RS21220 () | 4467863..4468372 | + | 510 | WP_130016327.1 | Regulator of sigma S factor FliZ | VF |
| GHV41_RS21225 () | 4468500..4469492 | + | 993 | WP_153859970.1 | D-cysteine desulfhydrase | - |
| GHV41_RS21230 () | 4469607..4470407 | + | 801 | WP_153859971.1 | cystine ABC transporter substrate-binding protein | - |
| GHV41_RS21235 () | 4470407..4471069 | + | 663 | WP_037419074.1 | cystine ABC transporter permease | - |
| GHV41_RS21240 () | 4471073..4471825 | + | 753 | WP_012145656.1 | Arginine transport ATP-binding protein ArtM | VF |
| GHV41_RS21245 () | 4471857..4472270 | - | 414 | WP_153859972.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GHV41_RS21250 () | 4472300..4472482 | - | 183 | WP_153859973.1 | type II toxin-antitoxin system HicA family toxin | - |
| GHV41_RS21255 () | 4472649..4476620 | - | 3972 | WP_153859974.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| GHV41_RS21260 () | 4477165..4478649 | + | 1485 | WP_153859975.1 | sodium/proline symporter PutP | - |
| GHV41_RS21265 () | 4479042..4479887 | + | 846 | WP_153859976.1 | FTR1 family protein | - |
| GHV41_RS21270 () | 4479906..4481042 | + | 1137 | WP_153859977.1 | iron uptake system protein EfeO | - |
| GHV41_RS21275 () | 4481053..4482345 | + | 1293 | WP_153859978.1 | deferrochelatase/peroxidase EfeB | - |
| GHV41_RS21280 () | 4482558..4484705 | + | 2148 | WP_153859979.1 | TonB-dependent receptor | - |
| GHV41_RS21285 () | 4485390..4486175 | + | 786 | WP_004945903.1 | phosphate starvation-inducible protein PhoH | - |
| GHV41_RS21290 () | 4486248..4487117 | - | 870 | WP_153859980.1 | dimethyl sulfoxide reductase anchor subunit | - |
| GHV41_RS21295 () | 4487123..4487677 | - | 555 | WP_206194486.1 | 4Fe-4S binding protein | - |
| GHV41_RS21300 () | 4487680..4490013 | - | 2334 | WP_153859981.1 | molybdopterin-dependent oxidoreductase | - |
| GHV41_RS21305 () | 4490422..4491324 | + | 903 | WP_153859982.1 | lipid A hydroxylase LpxO | - |
| GHV41_RS21310 () | 4491375..4492475 | - | 1101 | WP_153859983.1 | sodium-potassium/proton antiporter ChaA | - |
| GHV41_RS21315 () | 4492790..4493608 | - | 819 | WP_153859984.1 | siderophore-interacting protein | - |
| GHV41_RS21320 () | 4493739..4493966 | + | 228 | WP_129936661.1 | putative cation transport regulator ChaB | - |
| GHV41_RS21325 () | 4494423..4495118 | + | 696 | WP_153859985.1 | gamma-glutamylcyclotransferase | - |
| GHV41_RS21330 () | 4495418..4496371 | + | 954 | WP_012145640.1 | HTH-type transcriptional regulator Cbl | - |
| GHV41_RS21335 () | 4496548..4498116 | + | 1569 | WP_153859986.1 | ABC transporter substrate-binding protein | - |
| GHV41_RS21340 () | 4498116..4499168 | + | 1053 | WP_153859987.1 | ABC transporter permease | - |
| GHV41_RS21345 () | 4499165..4500034 | + | 870 | WP_153859988.1 | ABC transporter permease | - |
| GHV41_RS21350 () | 4500024..4500860 | + | 837 | WP_153859989.1 | Dipeptide transport ATP-binding protein DppD | VF |
| GHV41_RS21355 () | 4500857..4501528 | + | 672 | WP_153859990.1 | putative D,D-dipeptide transport ATP-binding protein DdpF | VF |
| GHV41_RS21360 () | 4501677..4503251 | + | 1575 | WP_153859991.1 | ABC transporter substrate-binding protein | - |
| GHV41_RS21365 () | 4503309..4504589 | + | 1281 | WP_153859992.1 | nitrate regulatory protein | - |
| GHV41_RS21370 () | 4505094..4506353 | + | 1260 | WP_153859993.1 | ABC transporter substrate-binding protein | - |
| GHV41_RS21375 () | 4506362..4507258 | + | 897 | WP_153859994.1 | nitrate ABC transporter permease | - |
| GHV41_RS21380 () | 4507269..4508057 | + | 789 | WP_153859995.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| GHV41_RS21385 () | 4508068..4512213 | + | 4146 | WP_153859996.1 | nitrite reductase large subunit NirB | - |
| GHV41_RS21390 () | 4512210..4514861 | + | 2652 | WP_153859997.1 | nitrate reductase | - |
| GHV41_RS21395 () | 4514875..4515690 | + | 816 | WP_153859998.1 | uroporphyrinogen-III C-methyltransferase | - |
| GHV41_RS21400 () | 4515695..4516351 | - | 657 | WP_153859999.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| GHV41_RS21405 () | 4516880..4518382 | + | 1503 | WP_153860000.1 | Invasin | VF |
| GHV41_RS21410 () | 4518379..4519029 | - | 651 | WP_153860001.1 | Nitrate/nitrite response regulator protein NarL | VF |
| GHV41_RS21415 () | 4519041..4520824 | - | 1784 | Protein_4172 | nitrate/nitrite two-component system sensor histidine kinase NarX | - |
| GHV41_RS21420 () | 4521187..4522575 | + | 1389 | WP_153860002.1 | NarK family nitrate/nitrite MFS transporter | - |
| GHV41_RS21425 () | 4523469..4524368 | + | 900 | WP_153860003.1 | winged helix-turn-helix domain-containing protein | - |
| GHV41_RS21430 () | 4524550..4525506 | + | 957 | WP_153860004.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GHV41_RS21435 () | 4525715..4526764 | + | 1050 | WP_153860005.1 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase | VF |
| GHV41_RS21440 () | 4527014..4528147 | + | 1134 | WP_153860006.1 | hypothetical protein | VF |
| GHV41_RS21445 () | 4528176..4530359 | + | 2184 | WP_153860007.1 | Tyrosine-protein kinase wzc | VF |
| GHV41_RS21450 () | 4530364..4531653 | + | 1290 | WP_153860008.1 | flippase | - |
| GHV41_RS21455 () | 4531643..4532491 | + | 849 | WP_153860009.1 | hypothetical protein | VF |
| GHV41_RS21460 () | 4532633..4533538 | + | 906 | WP_153860010.1 | glycosyltransferase | - |
| GHV41_RS21465 () | 4533540..4534601 | + | 1062 | WP_153860011.1 | glycosyltransferase family 4 protein | - |
| GHV41_RS21470 () | 4534603..4535346 | + | 744 | WP_153860012.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| GHV41_RS21475 () | 4535343..4537220 | + | 1878 | WP_153860013.1 | carbohydrate-binding protein CenC | - |
| GHV41_RS21480 () | 4537227..4538216 | + | 990 | WP_153860014.1 | glycosyltransferase family 2 protein | - |
| GHV41_RS21485 () | 4538221..4539123 | + | 903 | WP_153860015.1 | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase | VF |
| GHV41_RS21490 () | 4539297..4540550 | + | 1254 | WP_153860016.1 | EpsG family protein | - |
| GHV41_RS21495 () | 4540997..4544758 | + | 3762 | WP_153860017.1 | nitrate reductase subunit alpha | - |
| GHV41_RS21500 () | 4544755..4546299 | + | 1545 | WP_153860018.1 | nitrate reductase subunit beta | - |
| GHV41_RS21505 () | 4546296..4547018 | + | 723 | WP_153860019.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| GHV41_RS21510 () | 4547021..4547698 | + | 678 | WP_153860020.1 | respiratory nitrate reductase subunit gamma | - |
| GHV41_RS21515 () | 4547767..4548288 | - | 522 | WP_153860021.1 | Transcriptional regulatory protein RcsB | VF |
| GHV41_RS21520 () | 4548621..4549154 | - | 534 | WP_153860022.1 | Protein FimF | VF |
| GHV41_RS21525 () | 4549168..4549587 | - | 420 | Protein_4194 | fimbrial protein | - |
| GHV41_RS21530 () | 4550163..4552673 | - | 2511 | WP_153860955.1 | putative outer membrane usher protein ElfC | VF |
| GHV41_RS21535 () | 4552751..4553425 | - | 675 | WP_153860023.1 | putative fimbrial chaperone LpfB | VF |
| GHV41_RS21540 () | 4553475..4554023 | - | 549 | WP_153860024.1 | Type-1 fimbrial protein, A chain | VF |
| GHV41_RS21545 () | 4554442..4555038 | - | 597 | WP_153860025.1 | Tyrosine recombinase XerD | VF |
| GHV41_RS21550 () | 4555349..4555573 | + | 225 | WP_153860026.1 | hypothetical protein | - |
| GHV41_RS21555 () | 4555570..4555836 | + | 267 | WP_153860027.1 | hypothetical protein | - |
| GHV41_RS21560 () | 4556060..4557067 | + | 1008 | WP_153860028.1 | ketoacyl-ACP synthase III | - |
| GHV41_RS21565 () | 4557064..4558080 | + | 1017 | WP_153860029.1 | NAD(P)-dependent oxidoreductase | - |
| GHV41_RS21570 () | 4558073..4558879 | + | 807 | WP_153860030.1 | MBL fold metallo-hydrolase | - |
| GHV41_RS21575 () | 4558876..4560159 | + | 1284 | WP_153860031.1 | CoF synthetase | - |
| GHV41_RS21580 () | 4560159..4560776 | + | 618 | WP_167519993.1 | phosphatase PAP2 family protein | - |
| GHV41_RS21585 () | 4560773..4561906 | + | 1134 | WP_153860033.1 | sterol desaturase family protein | - |
| GHV41_RS21590 () | 4561899..4562981 | + | 1083 | WP_153860034.1 | acyl-CoA desaturase | - |
| GHV41_RS21595 () | 4562978..4564063 | + | 1086 | WP_153860035.1 | acyl-CoA desaturase | - |
| GHV41_RS21600 () | 4564113..4564262 | - | 150 | WP_153860036.1 | DUF2474 domain-containing protein | - |
| GHV41_RS21605 () | 4564277..4565284 | - | 1008 | WP_153860037.1 | cytochrome d ubiquinol oxidase subunit II | - |
| GHV41_RS21610 () | 4565287..4566687 | - | 1401 | WP_037419213.1 | cytochrome ubiquinol oxidase subunit I | - |
| GHV41_RS21615 () | 4566832..4568250 | + | 1419 | WP_153860038.1 | PLP-dependent aminotransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|