MGE detailed information
MGE type: IScluster/Tn MGE length: 20592 bp
Accession: NZ_CP045912 Location: 619714..640305 Organism: Xanthomonas oryzae pv. oryzicola strain 0-9 Replicon: chromosome
Accession: NZ_CP045912 Location: 619714..640305 Organism: Xanthomonas oryzae pv. oryzicola strain 0-9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHV42_RS02810 () | 619135..619599 | + | 465 | WP_153816720.1 | hypothetical protein | - |
| GHV42_RS02815 () | 619714..620697 | - | 984 | WP_153816721.1 | IS5 family transposase ISXfu1 | Transposase |
| GHV42_RS02820 () | 620847..622166 | - | 1320 | WP_153816722.1 | IS701 family transposase ISXo15 | Transposase |
| GHV42_RS02825 () | 622324..622455 | - | 132 | Protein_535 | IS5/IS1182 family transposase | - |
| GHV42_RS02830 () | 622492..623508 | + | 1017 | WP_076342622.1 | IS30 family transposase IS1382 | Transposase |
| GHV42_RS02835 () | 623522..624165 | - | 644 | Protein_537 | IS5 family transposase ISCARN33 | Transposase |
| GHV42_RS02840 () | 624195..624689 | + | 495 | WP_153816723.1 | hypothetical protein | - |
| GHV42_RS02845 () | 624686..625087 | + | 402 | WP_149621310.1 | hypothetical protein | - |
| GHV42_RS02850 () | 625087..625308 | + | 222 | WP_149621946.1 | hypothetical protein | - |
| GHV42_RS02855 () | 625437..628628 | + | 3192 | WP_153816724.1 | hemagglutinin repeat-containing protein | - |
| GHV42_RS02860 () | 628639..629607 | + | 969 | WP_011258802.1 | IS5 family transposase ISXo1 | Transposase |
| GHV42_RS02865 () | 629842..630105 | + | 264 | WP_153816725.1 | DUF2384 domain-containing protein | - |
| GHV42_RS02870 () | 630388..631764 | + | 1377 | WP_153817186.1 | IS5 family transposase ISXo4 | Transposase |
| GHV42_RS02875 () | 631786..632436 | + | 651 | Protein_545 | IS30 family transposase ISRme10 | Transposase |
| GHV42_RS02880 () | 632525..632803 | - | 279 | WP_153817187.1 | type I toxin-antitoxin system SymE family toxin | - |
| GHV42_RS02885 () | 633580..635661 | + | 2082 | Protein_547 | 16S rRNA endonuclease CdiA | VF |
| GHV42_RS02890 () | 635715..636200 | + | 486 | Protein_548 | IS30 family transposase IS1112a | Transposase |
| GHV42_RS02895 () | 636575..637840 | + | 1266 | WP_153816726.1 | avirulence protein | Toxin Detail |
| GHV42_RS02900 () | 637858..638154 | + | 297 | WP_044749828.1 | hypothetical protein | Antitoxin Detail |
| GHV42_RS02905 () | 638376..638642 | + | 267 | Protein_551 | IS5 family transposase ISXoo4 | Transposase |
| GHV42_RS02910 () | 638709..639134 | - | 426 | Protein_552 | IS3 family transposase ISAzsp1 | Transposase |
| GHV42_RS02915 () | 639203..640305 | + | 1103 | WP_153816727.1 | IS3 family transposase ISXo17 | Transposase |
| GHV42_RS02920 () | 640335..640412 | + | 78 | Protein_554 | anti-sigma factor antagonist | - |
| GHV42_RS02925 () | 640507..640682 | + | 176 | Protein_555 | HAD family hydrolase | - |
| GHV42_RS02930 () | 640898..641650 | - | 753 | WP_024712407.1 | YceI family protein | - |
| GHV42_RS02935 () | 641861..642451 | - | 591 | WP_014504809.1 | malonic semialdehyde reductase | - |
| GHV42_RS02940 () | 642587..643534 | + | 948 | WP_044751449.1 | mitochondrial fission ELM1 family protein | - |
| GHV42_RS02945 () | 643577..644446 | + | 870 | Protein_559 | DUF2145 domain-containing protein | - |
| GHV42_RS02950 () | 644443..644952 | + | 510 | WP_153816728.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|