MGE detailed information
MGE type: Genomic_island MGE length: 35345 bp
Accession: NZ_CP045857 Location: 1141352..1176696 Organism: Shewanella chilikensis strain DC57 Replicon: chromosome
Accession: NZ_CP045857 Location: 1141352..1176696 Organism: Shewanella chilikensis strain DC57 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII14_RS05320 () | 1136931..1139033 | + | 2103 | WP_165564593.1 | polyribonucleotide nucleotidyltransferase | - |
| GII14_RS05325 () | 1139187..1140086 | + | 900 | WP_165564594.1 | lipoprotein NlpI | - |
| GII14_RS05330 () | 1141039..1141359 | + | 321 | WP_000122829.1 | helix-turn-helix transcriptional regulator | - |
| GII14_RS05335 () | 1141352..1142566 | + | 1215 | WP_165564595.1 | Serine/threonine-protein kinase toxin HipA | VF |
| GII14_RS05340 () | 1142783..1142977 | + | 195 | WP_000127614.1 | DNA-binding protein | - |
| GII14_RS05345 () | 1142989..1144230 | - | 1242 | WP_145573938.1 | Prophage integrase IntS ; Integrase | Integrase |
| GII14_RS05350 () | 1144232..1144501 | - | 270 | WP_040513628.1 | hypothetical protein | - |
| GII14_RS05355 () | 1144504..1145478 | - | 975 | WP_165564596.1 | ParM/StbA family protein | - |
| GII14_RS05360 () | 1145943..1146386 | + | 444 | WP_165564597.1 | hypothetical protein | - |
| GII14_RS05365 () | 1146397..1147665 | - | 1269 | WP_165564598.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| GII14_RS05370 () | 1147673..1148122 | - | 450 | WP_165564599.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GII14_RS05375 () | 1148763..1149668 | + | 906 | WP_165564600.1 | DNA polymerase III subunit epsilon | - |
| GII14_RS05380 () | 1149882..1150181 | + | 300 | WP_165564601.1 | hypothetical protein | - |
| GII14_RS05385 () | 1150499..1151452 | + | 954 | WP_165564602.1 | WYL domain-containing protein | - |
| GII14_RS05390 () | 1151512..1153071 | + | 1560 | WP_165564603.1 | type I restriction-modification system subunit M | - |
| GII14_RS05395 () | 1153068..1154291 | + | 1224 | WP_165564604.1 | restriction endonuclease subunit S | - |
| GII14_RS05400 () | 1154380..1155381 | + | 1002 | WP_165564605.1 | Fic family protein | - |
| GII14_RS05405 () | 1155445..1158558 | + | 3114 | WP_165564606.1 | type I restriction endonuclease subunit R | - |
| GII14_RS05410 () | 1158671..1158967 | + | 297 | WP_165564607.1 | winged helix-turn-helix transcriptional regulator | - |
| GII14_RS05415 () | 1159087..1161237 | + | 2151 | WP_165564608.1 | TraI domain-containing protein | - |
| GII14_RS05420 () | 1161286..1163121 | + | 1836 | WP_165564609.1 | conjugative transfer system coupling protein TraD | - |
| GII14_RS05425 () | 1163131..1163691 | + | 561 | WP_165564610.1 | conjugative transfer protein | - |
| GII14_RS05430 () | 1163678..1164313 | + | 636 | WP_032481061.1 | DUF4400 domain-containing protein | - |
| GII14_RS05435 () | 1164452..1165558 | + | 1107 | WP_145573977.1 | Fic family protein | - |
| GII14_RS05440 () | 1165748..1166029 | + | 282 | WP_145573979.1 | type IV conjugative transfer system protein TraL | - |
| GII14_RS05445 () | 1166026..1166652 | + | 627 | WP_025441422.1 | pilus assembly protein | - |
| GII14_RS05450 () | 1166636..1167532 | + | 897 | WP_165565980.1 | type-F conjugative transfer system secretin TraK | - |
| GII14_RS05455 () | 1167535..1168824 | + | 1290 | WP_165564611.1 | TraB/VirB10 family protein | - |
| GII14_RS05460 () | 1168899..1169471 | + | 573 | WP_165564612.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GII14_RS05465 () | 1169468..1169854 | + | 387 | WP_165564613.1 | hypothetical protein | - |
| GII14_RS05470 () | 1169895..1170401 | - | 507 | WP_065274325.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GII14_RS05475 () | 1170392..1170658 | - | 267 | WP_032481064.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GII14_RS05480 () | 1171033..1171980 | + | 948 | WP_021024261.1 | IS30 family transposase ISSde3 | Transposase |
| GII14_RS05485 () | 1172017..1172463 | - | 447 | Protein_1045 | hypothetical protein | - |
| GII14_RS05490 () | 1172891..1173829 | - | 939 | WP_029627976.1 | Abi family protein | - |
| GII14_RS05495 () | 1174171..1174866 | + | 696 | WP_165564614.1 | DsbC family protein | - |
| GII14_RS05500 () | 1174866..1175858 | + | 993 | Protein_1048 | conjugal transfer protein TraC | - |
| GII14_RS05505 () | 1175953..1176696 | - | 744 | WP_206194633.1 | IS21 family transposase ISAs29 | Transposase |
| GII14_RS05510 () | 1176708..1178228 | - | 1521 | WP_165564615.1 | IS21 family transposase | - |
| GII14_RS05515 () | 1178456..1179883 | + | 1428 | Protein_1051 | ATP-binding protein | - |
| GII14_RS05520 () | 1179946..1181049 | - | 1104 | WP_165564616.1 | transposase | - |
| GII14_RS05525 () | 1181179..1181526 | + | 348 | WP_001044650.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|