MGE detailed information
MGE type: Genomic_island MGE length: 26925 bp
Accession: NZ_CP045837 Location: 660392..687316 Organism: Citrobacter sp. H12-3-2 Replicon: chromosome
Accession: NZ_CP045837 Location: 660392..687316 Organism: Citrobacter sp. H12-3-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHC22_RS03165 () | 655552..657450 | - | 1899 | WP_153752186.1 | hypothetical protein | - |
| GHC22_RS03170 () | 657501..658772 | - | 1272 | WP_153752188.1 | hypothetical protein | - |
| GHC22_RS03175 () | 658791..659738 | - | 948 | WP_115470127.1 | ATP-binding protein | - |
| GHC22_RS03180 () | 660079..660327 | + | 249 | Protein_621 | transposase | - |
| GHC22_RS03185 () | 660392..661543 | + | 1152 | WP_039025592.1 | IS30 family transposase IS30H | Transposase |
| GHC22_RS03190 () | 661553..662448 | + | 896 | Protein_623 | IS3 family transposase | - |
| GHC22_RS03195 () | 662464..662616 | + | 153 | Protein_624 | integrase | - |
| GHC22_RS03200 () | 662621..663235 | + | 615 | WP_182945211.1 | Adenosine monophosphate-protein transferase VbhT | VF |
| GHC22_RS03205 () | 663232..663378 | - | 147 | WP_153752190.1 | hypothetical protein | - |
| GHC22_RS03210 () | 663532..664320 | + | 789 | WP_153752192.1 | hypothetical protein | - |
| GHC22_RS03215 () | 664534..664770 | + | 237 | WP_153752194.1 | AlpA family phage regulatory protein | - |
| GHC22_RS03220 () | 664884..666308 | + | 1425 | WP_153752196.1 | DUF3987 domain-containing protein | - |
| GHC22_RS03225 () | 666433..667059 | + | 627 | WP_153752197.1 | inovirus Gp2 family protein | - |
| GHC22_RS03230 () | 667237..669426 | - | 2190 | WP_153752199.1 | DEAD/DEAH box helicase | - |
| GHC22_RS03235 () | 669423..671039 | - | 1617 | WP_153752201.1 | anti-bacteriophage protein AbpA | - |
| GHC22_RS03240 () | 671359..673284 | - | 1926 | WP_153752203.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| GHC22_RS03245 () | 673271..674611 | - | 1341 | WP_153752205.1 | DUF262 domain-containing protein | - |
| GHC22_RS03250 () | 674801..677917 | - | 3117 | WP_153752207.1 | HsdR family type I site-specific deoxyribonuclease | - |
| GHC22_RS03255 () | 678005..679288 | - | 1284 | WP_153752209.1 | restriction endonuclease subunit S | - |
| GHC22_RS03260 () | 679285..680862 | - | 1578 | WP_153752210.1 | type I restriction-modification system subunit M | - |
| GHC22_RS03265 () | 681114..681977 | + | 864 | WP_153752212.1 | GTPase family protein | - |
| GHC22_RS03270 () | 682069..682890 | + | 822 | WP_153752214.1 | DUF945 domain-containing protein | - |
| GHC22_RS03275 () | 683107..683808 | + | 702 | WP_153752216.1 | WYL domain-containing protein | - |
| GHC22_RS03280 () | 683849..684085 | + | 237 | WP_032181217.1 | hypothetical protein | - |
| GHC22_RS03285 () | 684085..684528 | + | 444 | WP_153752218.1 | hypothetical protein | - |
| GHC22_RS03290 () | 684552..685019 | + | 468 | WP_106929591.1 | hypothetical protein | - |
| GHC22_RS03295 () | 685096..685335 | + | 240 | WP_106929593.1 | DUF905 domain-containing protein | - |
| GHC22_RS03300 () | 685437..685895 | + | 459 | WP_106929595.1 | antirestriction protein | - |
| GHC22_RS03305 () | 685911..686387 | + | 477 | WP_106929597.1 | RadC family protein | - |
| GHC22_RS03310 () | 686396..686617 | + | 222 | WP_106929599.1 | DUF987 domain-containing protein | - |
| GHC22_RS03315 () | 686637..686954 | + | 318 | WP_106929602.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GHC22_RS03320 () | 686975..687316 | + | 342 | WP_106929604.1 | TA system toxin CbtA family protein | Toxin Detail |
| GHC22_RS03330 () | 687679..688185 | + | 507 | WP_008785849.1 | G/U mismatch-specific DNA glycosylase | - |
| GHC22_RS03335 () | 688231..690078 | - | 1848 | WP_003024699.1 | RNA polymerase sigma factor RpoD | - |
| GHC22_RS03340 () | 690363..692108 | - | 1746 | WP_003828467.1 | DNA primase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|