MGE detailed information
MGE type: Genomic_island MGE length: 66836 bp
Accession: NZ_CP045827 Location: 4967591..5034426 Organism: Escherichia coli strain AUSMDU00014361 Replicon: chromosome
Accession: NZ_CP045827 Location: 4967591..5034426 Organism: Escherichia coli strain AUSMDU00014361 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIJ02_RS25065 () | 4963686..4964261 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| GIJ02_RS25075 () | 4964641..4965906 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| GIJ02_RS25080 () | 4966023..4967594 | - | 1572 | WP_153781757.1 | IS66 family transposase | - |
| GIJ02_RS25085 () | 4967591..4969210 | - | 1620 | WP_001375513.1 | ISL3 family transposase ISEc38 | Transposase |
| GIJ02_RS25090 () | 4969306..4970085 | + | 780 | Protein_4925 | IS4 family transposase ISEc13 | Transposase |
| GIJ02_RS25095 () | 4970873..4972522 | + | 1650 | WP_153781758.1 | hypothetical protein | VF |
| GIJ02_RS25100 () | 4972740..4972889 | + | 150 | Protein_4927 | IS1 family transposase | - |
| GIJ02_RS25105 () | 4973130..4974119 | + | 990 | WP_000953025.1 | hypothetical protein | VF |
| GIJ02_RS25110 () | 4974168..4974842 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| GIJ02_RS25115 () | 4975178..4976119 | + | 942 | Protein_4930 | IS630 family transposase ISEc33 | Transposase |
| GIJ02_RS25120 () | 4976720..4986391 | + | 9672 | WP_153781759.1 | Toxin B | VF |
| GIJ02_RS25125 () | 4986563..4986913 | + | 351 | Protein_4932 | IS256 family transposase ISEic2 | Transposase |
| GIJ02_RS25130 () | 4987326..4987949 | - | 624 | WP_001443729.1 | Secreted effector protein EspF(U) | VF |
| GIJ02_RS25135 () | 4988165..4988443 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| GIJ02_RS25140 () | 4988449..4988670 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| GIJ02_RS25145 () | 4988707..4989114 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| GIJ02_RS25150 () | 4989121..4990065 | - | 945 | WP_001092012.1 | Protein EaeB | VF |
| GIJ02_RS25155 () | 4990086..4991228 | - | 1143 | WP_000935768.1 | hypothetical protein | VF |
| GIJ02_RS25160 () | 4991241..4991819 | - | 579 | WP_000381555.1 | Secreted effector protein SseB | VF |
| GIJ02_RS25165 () | 4991877..4992932 | - | 1056 | WP_001273459.1 | hypothetical protein | VF |
| GIJ02_RS25170 () | 4993075..4994295 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| GIJ02_RS25175 () | 4994510..4997329 | - | 2820 | WP_000627895.1 | Intimin | VF |
| GIJ02_RS25180 () | 4997390..4997860 | - | 471 | WP_000098786.1 | Tir chaperone | VF |
| GIJ02_RS25185 () | 4997993..4999609 | - | 1617 | WP_001121330.1 | Translocated intimin receptor Tir | VF |
| GIJ02_RS25190 () | 5000056..5000667 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| GIJ02_RS25195 () | 5000918..5001277 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| GIJ02_RS25200 () | 5001496..5002011 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| GIJ02_RS25205 () | 5002042..5002959 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| GIJ02_RS25210 () | 5002922..5003338 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| GIJ02_RS25215 () | 5003331..5003651 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| GIJ02_RS25220 () | 5003711..5005051 | - | 1341 | WP_000599711.1 | putative ATP synthase YscN | VF |
| GIJ02_RS25225 () | 5005035..5007062 | - | 2028 | WP_001037820.1 | Secretion system apparatus protein SsaV | VF |
| GIJ02_RS25230 () | 5007059..5007412 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| GIJ02_RS25235 () | 5007596..5007898 | + | 303 | WP_000338348.1 | hypothetical protein | VF |
| GIJ02_RS25240 () | 5007982..5008359 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| GIJ02_RS25245 () | 5008361..5008933 | + | 573 | WP_001233824.1 | Yop proteins translocation lipoprotein J | VF |
| GIJ02_RS25250 () | 5008939..5009394 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| GIJ02_RS25255 () | 5009394..5010932 | + | 1539 | WP_000723928.1 | Type III secretion system outer membrane protein SpiA | VF |
| GIJ02_RS25260 () | 5010946..5011401 | + | 456 | WP_000087469.1 | Chaperone protein SicA | VF |
| GIJ02_RS25265 () | 5011787..5012200 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| GIJ02_RS25270 () | 5012275..5012631 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| GIJ02_RS25275 () | 5012828..5013286 | + | 459 | WP_153781798.1 | hypothetical protein | VF |
| GIJ02_RS25280 () | 5013283..5014320 | - | 1038 | WP_001291687.1 | Yop proteins translocation protein U | VF |
| GIJ02_RS25285 () | 5014313..5015089 | - | 777 | WP_001002808.1 | Surface presentation of antigens protein SpaR | VF |
| GIJ02_RS25290 () | 5015089..5015358 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| GIJ02_RS25295 () | 5015358..5016011 | - | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| GIJ02_RS25300 () | 5016016..5016669 | - | 654 | WP_024219786.1 | hypothetical protein | VF |
| GIJ02_RS25305 () | 5016656..5017255 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| GIJ02_RS25310 () | 5017252..5017566 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| GIJ02_RS25315 () | 5017579..5017797 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| GIJ02_RS25320 () | 5017812..5018183 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| GIJ02_RS25325 () | 5019391..5020536 | + | 1146 | WP_000606968.1 | Cysteine protease-like VirA | VF |
| GIJ02_RS25330 () | 5020683..5021501 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| GIJ02_RS25335 () | 5021707..5022282 | + | 576 | Protein_4974 | hypothetical protein | VF |
| GIJ02_RS25340 () | 5022329..5022879 | + | 551 | Protein_4975 | IS3 family transposase IS2 | Transposase |
| GIJ02_RS25345 () | 5022864..5023013 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| GIJ02_RS25350 () | 5023509..5024722 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| GIJ02_RS25360 () | 5025075..5026613 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| GIJ02_RS25365 () | 5026979..5028313 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| GIJ02_RS25370 () | 5028393..5030540 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| GIJ02_RS25375 () | 5030599..5032056 | + | 1458 | WP_153781761.1 | dipeptide/tripeptide permease DtpC | - |
| GIJ02_RS25380 () | 5032293..5033810 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| GIJ02_RS25385 () | 5033929..5034102 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| GIJ02_RS25390 () | 5034130..5034426 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| GIJ02_RS25395 () | 5034653..5034925 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| GIJ02_RS25400 () | 5034937..5035167 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| GIJ02_RS25405 () | 5035348..5036979 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| GIJ02_RS25410 () | 5036976..5037695 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|