MGE detailed information
MGE type: IScluster/Tn MGE length: 25402 bp
Accession: NZ_CP045784 Location: 3998305..4023706 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: chromosome
Accession: NZ_CP045784 Location: 3998305..4023706 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH770_RS20380 () | 3994004..3996064 | + | 2061 | WP_000936901.1 | oligopeptidase B | - |
| GH770_RS20385 () | 3996061..3996723 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| GH770_RS20390 () | 3996747..3997403 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| GH770_RS20395 () | 3997505..3997735 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| GH770_RS20400 () | 3997874..3998248 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| GH770_RS20410 () | 3999639..4000460 | + | 822 | WP_046891729.1 | copper homeostasis membrane protein CopD | - |
| GH770_RS20415 () | 4000473..4000814 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 4000842..4001076 | - | 235 | - | - | Antitoxin Detail |
| - | 4000972..4001075 | + | 104 | - | - | Toxin Detail |
| GH770_RS20420 () | 4001207..4001734 | - | 528 | Protein_4011 | hypothetical protein ; Integrase | Integrase |
| GH770_RS20425 () | 4001800..4002956 | + | 1157 | Protein_4012 | IS3 family transposase IS600 | Transposase |
| GH770_RS20430 () | 4002999..4003440 | - | 442 | Protein_4013 | integrase | - |
| GH770_RS20435 () | 4003512..4004679 | + | 1168 | WP_129592854.1 | IS3 family transposase ISLad1 | Transposase |
| GH770_RS20440 () | 4004688..4005037 | - | 350 | Protein_4015 | IS3 family transposase ISSd1 | Transposase |
| GH770_RS20445 () | 4005143..4005523 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS20450 () | 4005520..4005867 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS20455 () | 4005916..4007454 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS20460 () | 4007611..4007907 | - | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| GH770_RS20465 () | 4007885..4009825 | - | 1941 | WP_005029490.1 | exodeoxyribonuclease VIII | - |
| GH770_RS20470 () | 4009925..4010200 | - | 276 | Protein_4021 | hypothetical protein | - |
| GH770_RS20475 () | 4010475..4011602 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| GH770_RS20480 () | 4011836..4013049 | + | 1214 | WP_167544914.1 | IS3 family transposase IS629 | Transposase |
| GH770_RS20485 () | 4013270..4013650 | + | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS20490 () | 4013647..4013994 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS20495 () | 4014043..4014798 | + | 756 | Protein_4026 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS20500 () | 4014947..4015303 | + | 357 | WP_284513918.1 | IS66 family transposase IS682 | Transposase |
| GH770_RS20505 () | 4015388..4016926 | - | 1539 | WP_046891741.1 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS20510 () | 4016975..4017322 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS20515 () | 4017319..4017699 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS20520 () | 4017793..4018999 | + | 1207 | Protein_4031 | prophage tail fiber N-terminal domain-containing protein | - |
| GH770_RS20525 () | 4018950..4019573 | + | 624 | WP_024259614.1 | DUF4376 domain-containing protein | - |
| GH770_RS20530 () | 4019753..4021459 | - | 1707 | WP_024259619.1 | hypothetical protein | VF |
| GH770_RS20535 () | 4022211..4022438 | + | 228 | Protein_4034 | metallophosphoesterase | - |
| GH770_RS20540 () | 4022493..4023706 | + | 1214 | WP_171769615.1 | IS3 family transposase IS629 | Transposase |
| GH770_RS20545 () | 4023746..4024180 | + | 435 | Protein_4036 | serine/threonine-protein phosphatase | - |
| GH770_RS20550 () | 4024181..4024372 | - | 192 | WP_000457842.1 | YebW family protein | - |
| GH770_RS20555 () | 4024477..4024713 | - | 237 | WP_001295499.1 | YebV family protein | - |
| GH770_RS20560 () | 4024831..4026270 | - | 1440 | WP_005024823.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|