MGE detailed information
MGE type: Prophage MGE length: 61495 bp
Accession: NZ_CP045784 Location: 3991314..4052808 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: chromosome
Accession: NZ_CP045784 Location: 3991314..4052808 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH770_RS20345 () | 3987458..3989269 | + | 1812 | WP_001069475.1 | phosphogluconate dehydratase | - |
| GH770_RS20350 () | 3989306..3989947 | + | 642 | WP_000800510.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GH770_RS20355 () | 3990003..3991181 | - | 1179 | WP_000173486.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GH770_RS20360 () | 3991314..3991608 | + | 295 | Protein_3999 | DNA damage-inducible protein YebG | - |
| GH770_RS20365 () | 3991675..3992031 | + | 357 | WP_001295500.1 | protein YebF | - |
| GH770_RS20375 () | 3993135..3993794 | + | 660 | WP_000024738.1 | tellurite resistance TerB family protein | - |
| GH770_RS20380 () | 3994004..3996064 | + | 2061 | WP_000936901.1 | oligopeptidase B | - |
| GH770_RS20385 () | 3996061..3996723 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| GH770_RS20390 () | 3996747..3997403 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| GH770_RS20395 () | 3997505..3997735 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| GH770_RS20400 () | 3997874..3998248 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| GH770_RS20410 () | 3999639..4000460 | + | 822 | WP_046891729.1 | copper homeostasis membrane protein CopD | - |
| GH770_RS20415 () | 4000473..4000814 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 4000842..4001076 | - | 235 | - | - | Antitoxin Detail |
| - | 4000972..4001075 | + | 104 | - | - | Toxin Detail |
| GH770_RS20420 () | 4001207..4001734 | - | 528 | Protein_4011 | hypothetical protein ; Integrase | Integrase |
| GH770_RS20425 () | 4001800..4002956 | + | 1157 | Protein_4012 | IS3 family transposase IS600 | Transposase |
| GH770_RS20430 () | 4002999..4003440 | - | 442 | Protein_4013 | integrase | - |
| GH770_RS20435 () | 4003512..4004679 | + | 1168 | WP_129592854.1 | IS3 family transposase ISLad1 | Transposase |
| GH770_RS20440 () | 4004688..4005037 | - | 350 | Protein_4015 | IS3 family transposase ISSd1 | Transposase |
| GH770_RS20445 () | 4005143..4005523 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS20450 () | 4005520..4005867 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS20455 () | 4005916..4007454 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS20460 () | 4007611..4007907 | - | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| GH770_RS20465 () | 4007885..4009825 | - | 1941 | WP_005029490.1 | exodeoxyribonuclease VIII | - |
| GH770_RS20470 () | 4009925..4010200 | - | 276 | Protein_4021 | hypothetical protein | - |
| GH770_RS20475 () | 4010475..4011602 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| GH770_RS20480 () | 4011836..4013049 | + | 1214 | WP_167544914.1 | IS3 family transposase IS629 | Transposase |
| GH770_RS20485 () | 4013270..4013650 | + | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS20490 () | 4013647..4013994 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS20495 () | 4014043..4014798 | + | 756 | Protein_4026 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS20500 () | 4014947..4015303 | + | 357 | WP_284513918.1 | IS66 family transposase IS682 | Transposase |
| GH770_RS20505 () | 4015388..4016926 | - | 1539 | WP_046891741.1 | IS66 family transposase ISEc22 | Transposase |
| GH770_RS20510 () | 4016975..4017322 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| GH770_RS20515 () | 4017319..4017699 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| GH770_RS20520 () | 4017793..4018999 | + | 1207 | Protein_4031 | prophage tail fiber N-terminal domain-containing protein | - |
| GH770_RS20525 () | 4018950..4019573 | + | 624 | WP_024259614.1 | DUF4376 domain-containing protein | - |
| GH770_RS20530 () | 4019753..4021459 | - | 1707 | WP_024259619.1 | hypothetical protein | VF |
| GH770_RS20535 () | 4022211..4022438 | + | 228 | Protein_4034 | metallophosphoesterase | - |
| GH770_RS20540 () | 4022493..4023706 | + | 1214 | WP_171769615.1 | IS3 family transposase IS629 | Transposase |
| GH770_RS20545 () | 4023746..4024180 | + | 435 | Protein_4036 | serine/threonine-protein phosphatase | - |
| GH770_RS20550 () | 4024181..4024372 | - | 192 | WP_000457842.1 | YebW family protein | - |
| GH770_RS20555 () | 4024477..4024713 | - | 237 | WP_001295499.1 | YebV family protein | - |
| GH770_RS20560 () | 4024831..4026270 | - | 1440 | WP_005024823.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GH770_RS20565 () | 4026350..4028983 | - | 2634 | WP_005042252.1 | hypothetical protein | VF |
| GH770_RS20570 () | 4028952..4030235 | - | 1284 | WP_024259618.1 | membrane integrity lipid transport subunit YebS | - |
| GH770_RS20575 () | 4030365..4030862 | + | 498 | WP_001043888.1 | L-methionine (R)-S-oxide reductase | - |
| GH770_RS20580 () | 4030959..4031657 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| GH770_RS20585 () | 4031677..4033725 | + | 2049 | WP_024259617.1 | carboxy terminal-processing peptidase | - |
| GH770_RS20590 () | 4033917..4034798 | + | 882 | WP_000984517.1 | protease HtpX | - |
| GH770_RS20595 () | 4034844..4036217 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| GH770_RS20600 () | 4036394..4037185 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| GH770_RS20605 () | 4037328..4037567 | - | 240 | WP_001211011.1 | YobH family protein | - |
| GH770_RS20610 () | 4037726..4037869 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GH770_RS20615 () | 4037944..4038231 | + | 288 | WP_001006852.1 | YebO family protein | - |
| GH770_RS20620 () | 4038572..4039269 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| GH770_RS20625 () | 4039557..4039700 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| GH770_RS20630 () | 4039713..4039922 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GH770_RS20635 () | 4040088..4040897 | + | 810 | WP_000010113.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GH770_RS20640 () | 4040894..4041460 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| GH770_RS20645 () | 4041888..4042346 | - | 459 | WP_000156259.1 | DUF986 family protein | - |
| GH770_RS20650 () | 4042401..4043252 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| GH770_RS20655 () | 4043265..4044065 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| GH770_RS20660 () | 4044128..4045099 | - | 972 | WP_000150543.1 | PTS mannose transporter subunit IIAB | - |
| GH770_RS26820 () | 4045416..4045574 | + | 159 | WP_001327808.1 | protein YoaL | - |
| GH770_RS20665 () | 4045562..4047118 | + | 1557 | WP_046891727.1 | CNNM family cation transport protein YoaE | - |
| GH770_RS20670 () | 4047245..4047736 | + | 492 | Protein_4062 | IS110-like element ISSso6 family transposase | - |
| GH770_RS20675 () | 4047717..4048535 | - | 819 | Protein_4063 | hypothetical protein | VF |
| GH770_RS20685 () | 4049793..4050551 | - | 759 | Protein_4065 | CSS-motif domain-containing protein | - |
| GH770_RS20690 () | 4050682..4052046 | - | 1365 | WP_000624300.1 | L-serine ammonia-lyase | - |
| GH770_RS20695 () | 4052230..4052808 | - | 579 | WP_000456725.1 | CoA pyrophosphatase | - |
| GH770_RS20700 () | 4052812..4054173 | - | 1362 | WP_000855021.1 | aminodeoxychorismate synthase component 1 | - |
| GH770_RS20705 () | 4054247..4054426 | + | 180 | WP_000457334.1 | YoaH family protein | - |
| GH770_RS20715 () | 4055372..4055716 | - | 345 | WP_005042226.1 | RidA family protein | - |
| GH770_RS20720 () | 4055848..4057758 | + | 1911 | WP_000128834.1 | ATP-dependent DNA helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|