MGE detailed information
MGE type: Prophage MGE length: 46036 bp
Accession: NZ_CP045784 Location: 2971504..3017539 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: chromosome
Accession: NZ_CP045784 Location: 2971504..3017539 Organism: Shigella dysenteriae strain CFSAN029786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH770_RS15050 (2968237) | 2968237..2970588 | - | 2352 | Protein_2954 | alpha-glucosidase | - |
| GH770_RS15055 (2970605) | 2970605..2971489 | - | 885 | Protein_2955 | protein YgjJ | - |
| GH770_RS15065 (2972256) | 2972256..2973110 | + | 855 | Protein_2957 | phosphoglycerate dehydrogenase | - |
| GH770_RS15085 (2973693) | 2973693..2974790 | + | 1098 | WP_000678655.1 | murein transglycosylase A | - |
| GH770_RS15090 (2974867) | 2974867..2975673 | + | 807 | WP_000117723.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| GH770_RS15095 (2975724) | 2975724..2976167 | - | 444 | WP_000184264.1 | cysteine desulfurase sulfur acceptor subunit CsdE | - |
| GH770_RS15100 (2976167) | 2976167..2977372 | - | 1206 | WP_005031696.1 | cysteine desulfurase CsdA | - |
| GH770_RS15105 (2977564) | 2977564..2977791 | + | 228 | WP_000750398.1 | YgdI/YgdR family lipoprotein | - |
| GH770_RS15110 (2978142) | 2978142..2979059 | + | 918 | WP_000044401.1 | glycine cleavage system transcriptional regulator GcvA | - |
| GH770_RS15115 (2979078) | 2979078..2979473 | + | 396 | WP_000203903.1 | DUF423 domain-containing protein | - |
| GH770_RS15120 (2979466) | 2979466..2980566 | + | 1101 | WP_001045525.1 | 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM | - |
| GH770_RS15125 (2980610) | 2980610..2981341 | - | 732 | WP_000642344.1 | L-fucose operon activator | - |
| GH770_RS15130 (2981399) | 2981399..2981821 | - | 423 | Protein_2967 | L-fucose mutarotase | - |
| GH770_RS15135 (2981823) | 2981823..2983241 | - | 1419 | WP_000808369.1 | L-fuculokinase | - |
| GH770_RS15140 (2983238) | 2983238..2984983 | - | 1746 | WP_000724154.1 | L-fucose isomerase | - |
| GH770_RS15145 (2985016) | 2985016..2986056 | - | 1041 | Protein_2970 | hypothetical protein | VF |
| GH770_RS15155 (2986826) | 2986826..2987269 | + | 444 | Protein_2972 | L-fuculose-phosphate aldolase | - |
| GH770_RS15160 (2987297) | 2987297..2988434 | + | 1138 | Protein_2973 | hypothetical protein | VF |
| GH770_RS15165 (2988539) | 2988539..2989294 | - | 756 | WP_005043783.1 | flap endonuclease Xni | - |
| GH770_RS15170 (2989406) | 2989406..2990773 | - | 1368 | WP_000626404.1 | L-serine ammonia-lyase II | - |
| GH770_RS15175 (2990831) | 2990831..2992120 | - | 1290 | WP_000450481.1 | HAAAP family serine/threonine permease SdaC | - |
| GH770_RS15180 (2992677) | 2992677..2994041 | - | 1365 | WP_000627995.1 | nucleotide 5'-monophosphate nucleosidase PpnN | - |
| GH770_RS15185 (2994153) | 2994153..2995001 | - | 849 | WP_000100420.1 | NADPH-dependent 7-cyano-7-deazaguanine reductase QueF | - |
| GH770_RS15190 (2995069) | 2995069..2995614 | + | 546 | WP_000342435.1 | SecY-interacting protein | - |
| GH770_RS15195 (2996236) | 2996236..2996565 | + | 330 | WP_000206994.1 | YqcC family protein | - |
| GH770_RS15200 (2996565) | 2996565..2997347 | + | 783 | WP_000890001.1 | tRNA pseudouridine(65) synthase TruC | - |
| GH770_RS15205 (2997365) | 2997365..2997814 | + | 450 | WP_000807753.1 | flavodoxin | - |
| GH770_RS15210 (2998231) | 2998231..2999601 | + | 1371 | WP_046891767.1 | galactarate/glucarate/glycerate transporter GudP | - |
| GH770_RS15215 (2999603) | 2999603..3000943 | + | 1341 | WP_000211792.1 | enolase C-terminal domain-like protein | - |
| GH770_RS15220 (3000964) | 3000964..3002304 | + | 1341 | WP_000098225.1 | glucarate dehydratase | - |
| GH770_RS15225 (3002536) | 3002536..3005292 | - | 2757 | WP_000186450.1 | two-component sensor histidine kinase BarA | - |
| GH770_RS15230 (3005349) | 3005349..3006650 | + | 1302 | WP_000046825.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| GH770_RS15235 (3006698) | 3006698..3008932 | + | 2235 | WP_000226815.1 | hypothetical protein | VF |
| GH770_RS15240 (3009010) | 3009010..3009258 | + | 249 | WP_000581937.1 | type II toxin-antitoxin system antitoxin MazE | Antitoxin Detail |
| GH770_RS15245 (3009258) | 3009258..3009593 | + | 336 | WP_000254733.1 | endoribonuclease MazF | Toxin Detail |
| GH770_RS15250 (3009664) | 3009664..3010455 | + | 792 | WP_001071648.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| GH770_RS15255 (3010678) | 3010678..3012315 | + | 1638 | WP_000210878.1 | CTP synthase (glutamine hydrolyzing) | - |
| GH770_RS15260 (3012403) | 3012403..3013701 | + | 1299 | WP_000036723.1 | phosphopyruvate hydratase | - |
| GH770_RS15265 (3013761) | 3013761..3014087 | - | 327 | Protein_2994 | YgcG family protein | - |
| GH770_RS15275 (3014830) | 3014830..3014952 | - | 123 | WP_001288225.1 | hypothetical protein | - |
| GH770_RS15280 (3015091) | 3015091..3015762 | + | 672 | WP_001199969.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| GH770_RS15290 (3016842) | 3016842..3017539 | + | 698 | WP_237161005.1 | IS1 family transposase IS1R | Transposase |
| GH770_RS15295 (3017556) | 3017556..3018745 | + | 1190 | Protein_3000 | AIDA repeat-containing protein | - |
| GH770_RS15305 (3019483) | 3019483..3019965 | - | 483 | WP_000162580.1 | SsrA-binding protein SmpB | - |
| GH770_RS15310 (3020136) | 3020136..3020573 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| GH770_RS15315 (3020563) | 3020563..3020853 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| GH770_RS15320 (3020915) | 3020915..3021256 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|