MGE detailed information
MGE type: Genomic_island MGE length: 20791 bp
Accession: NZ_CP045741 Location: 387657..408447 Organism: Escherichia coli strain DH5alpha Replicon: chromosome
Accession: NZ_CP045741 Location: 387657..408447 Organism: Escherichia coli strain DH5alpha Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHR40_RS01850 () | 382976..383878 | - | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| GHR40_RS01855 () | 383898..384401 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| GHR40_RS01860 () | 384414..384944 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| GHR40_RS01865 () | 384954..387590 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| GHR40_RS01870 () | 387657..388382 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| GHR40_RS01875 () | 388419..388958 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| GHR40_RS01880 () | 389023..389571 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| GHR40_RS01885 () | 390053..390667 | - | 615 | WP_038404959.1 | type 1 fimbria switch DNA invertase FimE | - |
| GHR40_RS01890 () | 390660..391357 | - | 698 | Protein_369 | IS1-like element IS1A family transposase | - |
| GHR40_RS01895 () | 391903..392505 | - | 603 | WP_000790589.1 | type 1 fimbria switch DNA invertase FimB | - |
| GHR40_RS01900 () | 393961..394677 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| GHR40_RS01905 () | 394697..395803 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| GHR40_RS01910 () | 395868..396848 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| GHR40_RS01915 () | 397431..398671 | - | 1241 | Protein_374 | DNA helicase | - |
| GHR40_RS01920 () | 398787..399032 | + | 246 | Protein_375 | GNAT family N-acetyltransferase | - |
| GHR40_RS01925 () | 399409..399666 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| GHR40_RS01930 () | 399678..400223 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| GHR40_RS01935 () | 400279..401025 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| GHR40_RS01940 () | 401194..401412 | + | 219 | Protein_379 | hypothetical protein | - |
| GHR40_RS23375 () | 401450..401566 | + | 117 | Protein_380 | VOC family protein | - |
| GHR40_RS01945 () | 401811..402932 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| GHR40_RS01950 () | 402929..403207 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| GHR40_RS01955 () | 403219..404532 | + | 1314 | WP_000460842.1 | galactitol-specific PTS transporter subunit IIC | - |
| GHR40_RS01960 () | 404545..405351 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| GHR40_RS01965 () | 405482..405913 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| GHR40_RS01970 () | 405925..406557 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| GHR40_RS01975 () | 406574..407356 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| GHR40_RS01980 () | 407659..408447 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| GHR40_RS01985 () | 408452..409357 | + | 906 | WP_000714564.1 | dihydrodipicolinate synthase family protein | - |
| GHR40_RS01990 () | 409368..411335 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| GHR40_RS01995 () | 411442..412791 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|