NZ_CP0457413335178..3347984

MGE detailed information

MGE type: Genomic_island        MGE length: 12807 bp
Accession: NZ_CP045741        Location: 3335178..3347984         Organism: Escherichia coli strain DH5alpha       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GHR40_RS16040 () 3333555..3334295 + 741 Protein_3109 autotransporter outer membrane beta-barrel domain-containing protein -
GHR40_RS16045 () 3335178..3335444 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
GHR40_RS16050 () 3335444..3336766 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
GHR40_RS16055 () 3337078..3337286 + 209 Protein_3112 helix-turn-helix transcriptional regulator -
GHR40_RS16060 () 3337541..3338767 + 1227 Protein_3113 fimbrial biogenesis outer membrane usher protein -
GHR40_RS16065 () 3338781..3339311 + 531 WP_000876763.1 type 1 fimbrial protein -
GHR40_RS16070 () 3339324..3339827 + 504 WP_000825452.1 type 1 fimbrial protein -
GHR40_RS16075 () 3339886..3340800 + 915 WP_046613219.1 fimbrial protein -
GHR40_RS16080 () 3341134..3343413 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
GHR40_RS16085 () 3343660..3343856 + 197 Protein_3118 two-component system connector SafA -
GHR40_RS16090 () 3343930..3344691 + 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
GHR40_RS16095 () 3345093..3346775 + 1683 WP_001295684.1 sulfatase -
GHR40_RS16100 () 3346827..3347984 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
GHR40_RS16105 () 3347950..3348072 - 123 WP_120795387.1 protein YneP -
GHR40_RS16110 () 3348275..3349960 + 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
GHR40_RS16115 () 3349998..3352370 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.004
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.004
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.004
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.006
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.004
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.004
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.004
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.004
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.004
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.003
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.004