MGE detailed information
MGE type: Conjugative plasmid MGE length: 114161 bp
Accession: NZ_CP045713 Location: 1..114161 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: plasmid pFHI_NMBU_11_01
Accession: NZ_CP045713 Location: 1..114161 Organism: Escherichia coli strain FHI_NMBU_11 Replicon: plasmid pFHI_NMBU_11_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHT02_RS25765 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| GHT02_RS25770 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| GHT02_RS25775 () | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| GHT02_RS25780 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| GHT02_RS25785 () | 3657..4766 | - | 1110 | WP_042964579.1 | SDR family oxidoreductase | - |
| GHT02_RS25790 () | 5199..6152 | - | 954 | WP_000280980.1 | hypothetical protein | VF |
| GHT02_RS25795 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| GHT02_RS25800 () | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| GHT02_RS25805 () | 9128..9453 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| GHT02_RS25810 () | 10168..10865 | + | 698 | Protein_9 | IS1 family transposase IS1S | Transposase |
| GHT02_RS25815 () | 11165..12331 | + | 1167 | WP_001238646.1 | hypothetical protein | VF |
| GHT02_RS25820 () | 12331..13302 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GHT02_RS25825 () | 14071..14414 | + | 344 | Protein_12 | hypothetical protein | - |
| GHT02_RS25830 () | 14483..15058 | + | 576 | WP_042964488.1 | hypothetical protein | - |
| GHT02_RS25835 () | 15071..15283 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| GHT02_RS25840 () | 15544..16515 | - | 972 | WP_000082155.1 | IS110 family transposase ISEc32 | Transposase |
| GHT02_RS25845 () | 17040..17342 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| GHT02_RS25850 () | 17342..17803 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| GHT02_RS25855 () | 17803..17985 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| GHT02_RS25860 () | 17973..18301 | - | 329 | Protein_19 | pilus assembly protein | - |
| GHT02_RS25865 () | 18979..19209 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| GHT02_RS25870 () | 19261..20622 | + | 1362 | WP_042964560.1 | DUF3560 domain-containing protein | - |
| GHT02_RS25875 () | 20670..21233 | + | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| GHT02_RS25880 () | 21319..21738 | - | 420 | WP_015056142.1 | hypothetical protein | - |
| GHT02_RS25885 () | 22039..22671 | + | 633 | WP_000290818.1 | single-stranded DNA-binding protein | - |
| GHT02_RS25890 () | 22634..22867 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| GHT02_RS25895 () | 22931..24889 | + | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| GHT02_RS25900 () | 24944..25378 | + | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| GHT02_RS25905 () | 25375..26094 | + | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| - () | 26106..26317 | + | 212 | NuclAT_0 | - | - |
| - () | 26106..26317 | + | 212 | NuclAT_0 | - | - |
| - () | 26106..26317 | + | 212 | NuclAT_0 | - | - |
| - () | 26106..26317 | + | 212 | NuclAT_0 | - | - |
| GHT02_RS25910 () | 26370..26531 | + | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| GHT02_RS25915 () | 26832..27129 | - | 298 | Protein_30 | hypothetical protein | - |
| GHT02_RS25920 () | 27430..27717 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| GHT02_RS25925 () | 27836..28657 | + | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| GHT02_RS25930 () | 28953..29543 | - | 591 | Protein_33 | hypothetical protein | VF |
| GHT02_RS25935 () | 29876..30259 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| GHT02_RS25940 () | 30446..31135 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| GHT02_RS25945 () | 31234..31629 | + | 396 | WP_086219023.1 | conjugal transfer relaxosome protein TraY | - |
| GHT02_RS25950 () | 31662..32027 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| GHT02_RS25955 () | 32042..32353 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GHT02_RS25960 () | 32375..32941 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| GHT02_RS25965 () | 32952..33656 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| GHT02_RS25970 () | 33656..35083 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| GHT02_RS25975 () | 35073..35663 | + | 591 | WP_000002796.1 | conjugal transfer protein TraP | - |
| GHT02_RS25980 () | 35617..35847 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| GHT02_RS25985 () | 35859..36110 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| GHT02_RS25990 () | 36107..36622 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GHT02_RS25995 () | 36757..36978 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| GHT02_RS26000 () | 37138..39765 | + | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| GHT02_RS26005 () | 39762..40148 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| GHT02_RS26010 () | 40145..40777 | + | 633 | WP_086219014.1 | type-F conjugative transfer system protein TraW | - |
| GHT02_RS26015 () | 40774..41766 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| GHT02_RS26020 () | 41775..42413 | + | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GHT02_RS26025 () | 42410..44218 | + | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GHT02_RS26030 () | 44245..44502 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| GHT02_RS26035 () | 44495..45238 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GHT02_RS26040 () | 45254..45601 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| GHT02_RS26045 () | 45720..46004 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GHT02_RS26050 () | 45991..46536 | + | 546 | WP_042965062.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GHT02_RS26055 () | 46466..46828 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| GHT02_RS26060 () | 46828..48201 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| GHT02_RS26065 () | 48198..51023 | + | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GHT02_RS26070 () | 51020..51529 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| GHT02_RS26075 () | 51543..52274 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| GHT02_RS26080 () | 52527..54680 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| GHT02_RS26085 () | 54680..59950 | + | 5271 | WP_001514237.1 | Multifunctional conjugation protein TraI | Relaxase |
| GHT02_RS26090 () | 59970..60716 | + | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| GHT02_RS26095 () | 60775..61635 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| GHT02_RS26100 () | 61738..62298 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| GHT02_RS26105 () | 62431..62643 | + | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| GHT02_RS26110 () | 62888..63349 | + | 462 | WP_001514236.1 | thermonuclease family protein | - |
| GHT02_RS26115 () | 63395..63604 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| GHT02_RS26120 () | 63643..64233 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| GHT02_RS26125 () | 64473..64733 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| GHT02_RS26130 () | 64958..65032 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| GHT02_RS26135 () | 65025..65882 | + | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| GHT02_RS26140 () | 66847..67119 | + | 273 | WP_000451332.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| GHT02_RS26145 () | 67106..67411 | + | 306 | WP_000535377.1 | type II toxin-antitoxin system YafQ family toxin | - |
| GHT02_RS26150 () | 67781..68101 | - | 321 | WP_000668718.1 | hypothetical protein | - |
| GHT02_RS26155 () | 68809..71847 | - | 3039 | WP_086218989.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| GHT02_RS26160 () | 72004..72585 | + | 582 | WP_001196199.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GHT02_RS26165 () | 72658..72819 | + | 162 | WP_001376226.1 | hypothetical protein | Antitoxin Detail |
| GHT02_RS26170 () | 72816..72998 | + | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GHT02_RS26175 () | 73097..73405 | + | 309 | WP_000377483.1 | hypothetical protein | - |
| GHT02_RS26180 () | 73965..74999 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| GHT02_RS26185 () | 75854..78031 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| GHT02_RS26190 () | 78076..79032 | - | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| GHT02_RS26195 () | 79117..80346 | - | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| GHT02_RS26200 () | 80450..84109 | - | 3660 | WP_086218988.1 | Multidrug efflux ATP-binding/permease protein | VF |
| GHT02_RS26205 () | 84249..85364 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| GHT02_RS26210 () | 86600..87699 | - | 1100 | Protein_89 | IS481 family transposase ISKpn28 | Transposase |
| GHT02_RS26215 () | 88253..88452 | + | 200 | Protein_90 | lysis protein | - |
| GHT02_RS26220 () | 88510..88803 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| GHT02_RS26225 () | 89430..90658 | + | 1229 | WP_088130945.1 | IS3 family transposase IS2 | Transposase |
| GHT02_RS26230 () | 91882..93075 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| GHT02_RS26235 () | 93253..93402 | + | 150 | Protein_94 | IS3 family transposase IS2 | Transposase |
| GHT02_RS26240 () | 93712..95101 | + | 1390 | Protein_95 | ISNCY family transposase ISKpn21 | Transposase |
| GHT02_RS26245 () | 95336..96277 | + | 942 | WP_000974762.1 | hypothetical protein | - |
| GHT02_RS26250 () | 96406..96600 | - | 195 | Protein_97 | IS200-IS605 family transposase IS200C | Transposase |
| GHT02_RS26255 () | 97074..98444 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| GHT02_RS26260 () | 98448..100388 | - | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| GHT02_RS26265 () | 100385..101572 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| GHT02_RS26270 () | 101918..102615 | - | 698 | Protein_101 | IS1 family transposase IS1G | Transposase |
| GHT02_RS26275 () | 103140..105341 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| GHT02_RS26280 () | 105423..106700 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| GHT02_RS26285 () | 106697..108439 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| GHT02_RS26290 () | 108439..108546 | - | 108 | Protein_105 | acetyltransferase | - |
| GHT02_RS26295 () | 108537..108644 | + | 108 | Protein_106 | colicin 10 immunity protein | - |
| GHT02_RS26300 () | 108641..110113 | - | 1473 | WP_033801039.1 | pore-forming bacteriocin colicin 10 | - |
| GHT02_RS26305 () | 110472..110837 | + | 366 | WP_021521282.1 | hypothetical protein | - |
| GHT02_RS26310 () | 110837..112024 | + | 1188 | WP_033810766.1 | IS91 family transposase ISEc37 | Transposase |
| GHT02_RS26315 () | 112413..112926 | - | 514 | Protein_110 | DUF4113 domain-containing protein | - |
| GHT02_RS26320 () | 112987..113091 | - | 105 | Protein_111 | AAA family ATPase | - |
| GHT02_RS26325 () | 113093..113416 | - | 324 | Protein_112 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|